RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 MRS2Q9HD23 443 aa13.03□□□□□ -0.32
USP6-205ENST00000574788 SALL2Q9Y467 1007 aaPredicted RBP13.02□□□□□ -0.32
USP6-205ENST00000574788 FTSJ3Q8IY81 847 aaKnown RBP13.02□□□□□ -0.33
USP6-205ENST00000574788 HAP1P54257 671 aaPredicted RBP13.01□□□□□ -0.33
USP6-205ENST00000574788 PLPPR3Q6T4P5 718 aa13.01□□□□□ -0.33
USP6-205ENST00000574788 C14orf37Q86TY3 774 aa13.01□□□□□ -0.33
USP6-205ENST00000574788 CFAP44Q96MT7 982 aa13□□□□□ -0.33
USP6-205ENST00000574788 NPHP1O15259 732 aa13□□□□□ -0.33
USP6-205ENST00000574788 PPM1GO15355 546 aaPredicted RBP13□□□□□ -0.33
USP6-205ENST00000574788 P3H3Q8IVL6 736 aa13□□□□□ -0.33
USP6-205ENST00000574788 ARID3CA6NKF2 412 aa12.99□□□□□ -0.33
USP6-205ENST00000574788 PPP1R15AO75807 674 aaPredicted RBP12.99□□□□□ -0.33
USP6-205ENST00000574788 MS4A1P11836 297 aa12.99□□□□□ -0.33
USP6-205ENST00000574788 FGD1P98174 961 aa12.99□□□□□ -0.33
USP6-205ENST00000574788 GOLGA2Q08379 1002 aa12.99□□□□□ -0.33
USP6-205ENST00000574788 KIAA2012Q0VF49 1180 aa12.98□□□□□ -0.33
USP6-205ENST00000574788 EIF4G2P78344 907 aaKnown RBP eCLIP12.98□□□□□ -0.33
USP6-205ENST00000574788 DDX10Q13206 875 aaKnown RBP12.98□□□□□ -0.33
USP6-205ENST00000574788 TULP1O00294 542 aaPredicted RBP12.98□□□□□ -0.33
USP6-205ENST00000574788 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
USP6-205ENST00000574788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.96□□□□□ -0.33
USP6-205ENST00000574788 PNNQ9H307 717 aaKnown RBP12.96□□□□□ -0.33
USP6-205ENST00000574788 USP35Q9P2H5 1018 aa12.95□□□□□ -0.34
USP6-205ENST00000574788 GOLGA6L4A6NEF3 574 aa12.95□□□□□ -0.34
USP6-205ENST00000574788 PABPN1Q86U42 306 aaKnown RBP eCLIP12.93□□□□□ -0.34
USP6-205ENST00000574788 KCNJ4P48050 445 aa12.92□□□□□ -0.34
USP6-205ENST00000574788 NAP1L5Q96NT1 182 aaPredicted RBP12.92□□□□□ -0.34
USP6-205ENST00000574788 ABCC9O60706 1549 aa12.91□□□□□ -0.34
USP6-205ENST00000574788 KNSTRNQ9Y448 316 aa12.91□□□□□ -0.34
USP6-205ENST00000574788 MTUS2Q5JR59 1369 aa12.9□□□□□ -0.34
USP6-205ENST00000574788 MCCP23508 829 aa12.89□□□□□ -0.35
USP6-205ENST00000574788 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
USP6-205ENST00000574788 ZBTB7CA1YPR0 619 aa12.88□□□□□ -0.35
USP6-205ENST00000574788 MSNP26038 577 aaKnown RBP12.88□□□□□ -0.35
USP6-205ENST00000574788 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
USP6-205ENST00000574788 KDM2AQ9Y2K7 1162 aa12.88□□□□□ -0.35
USP6-205ENST00000574788 CLSTN1O94985 981 aa12.88□□□□□ -0.35
USP6-205ENST00000574788 PTMSP20962 102 aa12.88□□□□□ -0.35
USP6-205ENST00000574788 OS9Q13438 667 aaPredicted RBP12.88□□□□□ -0.35
USP6-205ENST00000574788 NOC3LQ8WTT2 800 aaKnown RBP12.88□□□□□ -0.35
USP6-205ENST00000574788 CCDC34Q96HJ3 373 aa12.88□□□□□ -0.35
USP6-205ENST00000574788 PLCB2Q00722 1185 aa12.87□□□□□ -0.35
USP6-205ENST00000574788 HSP90AB1P08238 724 aaKnown RBP12.87□□□□□ -0.35
USP6-205ENST00000574788 RSF1Q96T23 1441 aaPredicted RBP12.84□□□□□ -0.35
USP6-205ENST00000574788 DRC7Q8IY82 874 aa12.83□□□□□ -0.36
USP6-205ENST00000574788 GNL2Q13823 731 aaKnown RBP12.83□□□□□ -0.36
USP6-205ENST00000574788 HTATSF1O43719 755 aaKnown RBP12.82□□□□□ -0.36
USP6-205ENST00000574788 NAP1L2Q9ULW6 460 aaPredicted RBP12.81□□□□□ -0.36
USP6-205ENST00000574788 HSCBQ8IWL3 235 aa12.81□□□□□ -0.36
USP6-205ENST00000574788 CHMP4AQ9BY43 222 aa12.81□□□□□ -0.36
USP6-205ENST00000574788 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
USP6-205ENST00000574788 DCAF1Q9Y4B6 1507 aa12.8□□□□□ -0.36
USP6-205ENST00000574788 GOLGA6L1Q8N7Z2 621 aa12.8□□□□□ -0.36
USP6-205ENST00000574788 CHIC2Q9UKJ5 165 aa12.77□□□□□ -0.36
USP6-205ENST00000574788 SYAP1Q96A49 352 aaPredicted RBP12.77□□□□□ -0.37
USP6-205ENST00000574788 TPM4P67936 248 aa12.77□□□□□ -0.37
USP6-205ENST00000574788 TMX4Q9H1E5 349 aaPredicted RBP12.76□□□□□ -0.37
USP6-205ENST00000574788 TPRNQ4KMQ1 711 aa12.76□□□□□ -0.37
USP6-205ENST00000574788 PRM3Q9NNZ6 103 aa12.76□□□□□ -0.37
USP6-205ENST00000574788 CHMP7Q8WUX9 453 aaPredicted RBP12.76□□□□□ -0.37
USP6-205ENST00000574788 KIAA1211Q6ZU35 1233 aa12.75□□□□□ -0.37
USP6-205ENST00000574788 HDGFP51858 240 aaKnown RBP12.75□□□□□ -0.37
USP6-205ENST00000574788 ARID4BQ4LE39 1312 aaPredicted RBP12.75□□□□□ -0.37
USP6-205ENST00000574788 TNNT3P45378 269 aaPredicted RBP12.74□□□□□ -0.37
USP6-205ENST00000574788 A0A0U1RQG5 324 aaPredicted RBP12.74□□□□□ -0.37
USP6-205ENST00000574788 LAS1LQ9Y4W2 734 aaKnown RBP12.72□□□□□ -0.37
USP6-205ENST00000574788 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
USP6-205ENST00000574788 POGKQ9P215 609 aa12.71□□□□□ -0.37
USP6-205ENST00000574788 HDAC5Q9UQL6 1122 aa12.71□□□□□ -0.37
USP6-205ENST00000574788 ISY1Q9ULR0 285 aaKnown RBP12.71□□□□□ -0.37
USP6-205ENST00000574788 GBP4Q96PP9 640 aa12.7□□□□□ -0.38
USP6-205ENST00000574788 CEP89Q96ST8 783 aa12.7□□□□□ -0.38
USP6-205ENST00000574788 NOP58Q9Y2X3 529 aaKnown RBP12.7□□□□□ -0.38
USP6-205ENST00000574788 PLEKHD1A6NEE1 506 aa12.7□□□□□ -0.38
USP6-205ENST00000574788 CSPP1Q1MSJ5 1256 aa12.69□□□□□ -0.38
USP6-205ENST00000574788 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
USP6-205ENST00000574788 CALD1Q05682 793 aaKnown RBP12.69□□□□□ -0.38
USP6-205ENST00000574788 IRX6P78412 446 aaPredicted RBP12.68□□□□□ -0.38
USP6-205ENST00000574788 LMOD2Q6P5Q4 547 aa12.68□□□□□ -0.38
USP6-205ENST00000574788 PPP4R2Q9NY27 417 aa12.68□□□□□ -0.38
USP6-205ENST00000574788 SETQ01105 290 aaPredicted RBP12.67□□□□□ -0.38
USP6-205ENST00000574788 KAT6BQ8WYB5 2073 aa12.67□□□□□ -0.38
USP6-205ENST00000574788 IPO8O15397 1037 aaKnown RBP12.67□□□□□ -0.38
USP6-205ENST00000574788 GPATCH3Q96I76 525 aa12.66□□□□□ -0.38
USP6-205ENST00000574788 PHF14O94880 888 aa12.66□□□□□ -0.38
USP6-205ENST00000574788 SCRIBQ14160 1630 aa12.65□□□□□ -0.38
USP6-205ENST00000574788 FRAT1Q92837 279 aaPredicted RBP12.65□□□□□ -0.38
USP6-205ENST00000574788 RGS3P49796 1198 aa12.65□□□□□ -0.38
USP6-205ENST00000574788 CARD11Q9BXL7 1154 aa12.64□□□□□ -0.39
USP6-205ENST00000574788 KANK1Q14678 1352 aa12.64□□□□□ -0.39
USP6-205ENST00000574788 RTF1Q92541 710 aaKnown RBP12.64□□□□□ -0.39
USP6-205ENST00000574788 KIF3AQ9Y496 699 aa12.64□□□□□ -0.39
USP6-205ENST00000574788 CHMP4CQ96CF2 233 aa12.63□□□□□ -0.39
USP6-205ENST00000574788 CLIP1P30622 1438 aa12.62□□□□□ -0.39
USP6-205ENST00000574788 TPM3P06753 285 aa12.61□□□□□ -0.39
USP6-205ENST00000574788 NEUROD2Q15784 382 aa12.61□□□□□ -0.39
USP6-205ENST00000574788 RGL3Q3MIN7 710 aa12.6□□□□□ -0.39
USP6-205ENST00000574788 EEA1Q15075 1411 aa12.6□□□□□ -0.39
USP6-205ENST00000574788 U2SURPO15042 1029 aaKnown RBP12.6□□□□□ -0.39
USP6-205ENST00000574788 TSR1Q2NL82 804 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms