RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 CHGAP10645 457 aaKnown RBP14.64□□□□□ -0.07
TOM1L1-216ENST00000573607 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.61□□□□□ -0.07
TOM1L1-216ENST00000573607 PAXIP1Q6ZW49 1069 aaPredicted RBP14.6□□□□□ -0.07
TOM1L1-216ENST00000573607 CFAP44Q96MT7 982 aa14.57□□□□□ -0.08
TOM1L1-216ENST00000573607 RIOK3O14730 519 aaKnown RBP14.53□□□□□ -0.08
TOM1L1-216ENST00000573607 PYGBP11216 843 aa14.53□□□□□ -0.08
TOM1L1-216ENST00000573607 FARP1Q9Y4F1 1045 aaPredicted RBP14.53□□□□□ -0.08
TOM1L1-216ENST00000573607 PRKAR2AP13861 404 aaKnown RBP14.52□□□□□ -0.09
TOM1L1-216ENST00000573607 CHRM1P11229 460 aaPredicted RBP14.5□□□□□ -0.09
TOM1L1-216ENST00000573607 HS6ST3Q8IZP7 471 aa14.5□□□□□ -0.09
TOM1L1-216ENST00000573607 FXR2P51116 673 aaKnown RBP eCLIP14.49□□□□□ -0.09
TOM1L1-216ENST00000573607 TSPYL2Q9H2G4 693 aaPredicted RBP14.49□□□□□ -0.09
TOM1L1-216ENST00000573607 SPRYD3Q8NCJ5 442 aa14.47□□□□□ -0.09
TOM1L1-216ENST00000573607 CHRDL2Q6WN34 429 aa14.43□□□□□ -0.1
TOM1L1-216ENST00000573607 VGFO15240 615 aaPredicted RBP14.4□□□□□ -0.1
TOM1L1-216ENST00000573607 PIP4P2Q8N4L2 257 aa14.4□□□□□ -0.1
TOM1L1-216ENST00000573607 STK25O00506 426 aa14.38□□□□□ -0.11
TOM1L1-216ENST00000573607 NKX1-1Q15270 411 aaPredicted RBP14.38□□□□□ -0.11
TOM1L1-216ENST00000573607 VSIG10Q8N0Z9 540 aa14.38□□□□□ -0.11
TOM1L1-216ENST00000573607 TSHZ2Q9NRE2 1034 aa14.38□□□□□ -0.11
TOM1L1-216ENST00000573607 TAOK2Q9UL54 1235 aa14.38□□□□□ -0.11
TOM1L1-216ENST00000573607 KDM2AQ9Y2K7 1162 aa14.37□□□□□ -0.11
TOM1L1-216ENST00000573607 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.36□□□□□ -0.11
TOM1L1-216ENST00000573607 ZFP91Q96JP5 570 aaPredicted RBP14.36□□□□□ -0.11
TOM1L1-216ENST00000573607 DNAJC5Q9H3Z4 198 aa14.36□□□□□ -0.11
TOM1L1-216ENST00000573607 BCL11BQ9C0K0 894 aaPredicted RBP14.32□□□□□ -0.12
TOM1L1-216ENST00000573607 CCDC61Q9Y6R9 512 aa14.32□□□□□ -0.12
TOM1L1-216ENST00000573607 SGIP1Q9BQI5 828 aa14.31□□□□□ -0.12
TOM1L1-216ENST00000573607 STK24Q9Y6E0 443 aa14.31□□□□□ -0.12
TOM1L1-216ENST00000573607 PCDHB8Q9UN66 801 aa14.28□□□□□ -0.12
TOM1L1-216ENST00000573607 PCDHB13Q9Y5F0 798 aa14.28□□□□□ -0.12
TOM1L1-216ENST00000573607 GTPBP6O43824 516 aaPredicted RBP14.26□□□□□ -0.13
TOM1L1-216ENST00000573607 ZNF467Q7Z7K2 595 aaPredicted RBP14.23□□□□□ -0.13
TOM1L1-216ENST00000573607 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
TOM1L1-216ENST00000573607 PDAP1Q13442 181 aaKnown RBP14.17□□□□□ -0.14
TOM1L1-216ENST00000573607 MAP3K13O43283 966 aa14.16□□□□□ -0.14
TOM1L1-216ENST00000573607 ZNF579Q8NAF0 562 aaKnown RBP14.16□□□□□ -0.14
TOM1L1-216ENST00000573607 IFNL1Q8IU54 200 aa14.15□□□□□ -0.14
TOM1L1-216ENST00000573607 KIF12Q96FN5 646 aa14.15□□□□□ -0.14
TOM1L1-216ENST00000573607 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
TOM1L1-216ENST00000573607 PSEN1P49768 467 aa14.13□□□□□ -0.15
TOM1L1-216ENST00000573607 CD44P16070 742 aaKnown RBP14.12□□□□□ -0.15
TOM1L1-216ENST00000573607 BCANQ96GW7 911 aa14.09□□□□□ -0.15
TOM1L1-216ENST00000573607 PHF12Q96QT6 1004 aa14.09□□□□□ -0.15
TOM1L1-216ENST00000573607 MFRPQ9BY79 579 aa14□□□□□ -0.17
TOM1L1-216ENST00000573607 RYDENQ9NUL5 291 aaKnown RBP14□□□□□ -0.17
TOM1L1-216ENST00000573607 C19orf67A6NJJ6 358 aa13.98□□□□□ -0.17
TOM1L1-216ENST00000573607 CABP2Q9NPB3 220 aa13.98□□□□□ -0.17
TOM1L1-216ENST00000573607 EFCAB3Q8N7B9 438 aa13.97□□□□□ -0.17
TOM1L1-216ENST00000573607 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
TOM1L1-216ENST00000573607 MS4A3Q96HJ5 214 aa13.92□□□□□ -0.18
TOM1L1-216ENST00000573607 CADPS2Q86UW7 1296 aa13.91□□□□□ -0.18
TOM1L1-216ENST00000573607 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
TOM1L1-216ENST00000573607 PPP1R37O75864 691 aa13.89□□□□□ -0.19
TOM1L1-216ENST00000573607 FBXO22Q8NEZ5 403 aa13.88□□□□□ -0.19
TOM1L1-216ENST00000573607 PRKCSHP14314 528 aaPredicted RBP13.87□□□□□ -0.19
TOM1L1-216ENST00000573607 TMEM106CQ9BVX2 250 aa13.86□□□□□ -0.19
TOM1L1-216ENST00000573607 SOX12O15370 315 aa13.84□□□□□ -0.19
TOM1L1-216ENST00000573607 NLRP6P59044 892 aa13.84□□□□□ -0.19
TOM1L1-216ENST00000573607 EVX2Q03828 476 aa13.81□□□□□ -0.2
TOM1L1-216ENST00000573607 HAX1O00165 279 aa13.78□□□□□ -0.2
TOM1L1-216ENST00000573607 MS4A4AQ96JQ5 239 aa13.78□□□□□ -0.2
TOM1L1-216ENST00000573607 NBR1Q14596 966 aa13.77□□□□□ -0.21
TOM1L1-216ENST00000573607 GALR2O43603 387 aaPredicted RBP13.76□□□□□ -0.21
TOM1L1-216ENST00000573607 GOLGA2Q08379 1002 aa13.75□□□□□ -0.21
TOM1L1-216ENST00000573607 TTLL13PA6NNM8 815 aa13.73□□□□□ -0.21
TOM1L1-216ENST00000573607 TIE1P35590 1138 aa13.72□□□□□ -0.21
TOM1L1-216ENST00000573607 TPRNQ4KMQ1 711 aa13.72□□□□□ -0.21
TOM1L1-216ENST00000573607 BMP2KQ9NSY1 1161 aaPredicted RBP13.72□□□□□ -0.21
TOM1L1-216ENST00000573607 MKRN3Q13064 507 aaKnown RBP13.7□□□□□ -0.22
TOM1L1-216ENST00000573607 WDR70Q9NW82 654 aa13.7□□□□□ -0.22
TOM1L1-216ENST00000573607 KCNV2Q8TDN2 545 aa13.65□□□□□ -0.22
TOM1L1-216ENST00000573607 TRIM35Q9UPQ4 493 aa13.64□□□□□ -0.23
TOM1L1-216ENST00000573607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.61□□□□□ -0.23
TOM1L1-216ENST00000573607 NCKAP5LQ9HCH0 1330 aa13.61□□□□□ -0.23
TOM1L1-216ENST00000573607 P3H3Q8IVL6 736 aa13.6□□□□□ -0.23
TOM1L1-216ENST00000573607 ATN1P54259 1190 aaPredicted RBP13.58□□□□□ -0.24
TOM1L1-216ENST00000573607 ILDR1Q86SU0 546 aaPredicted RBP13.58□□□□□ -0.24
TOM1L1-216ENST00000573607 DPY19L2Q6NUT2 758 aa13.57□□□□□ -0.24
TOM1L1-216ENST00000573607 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
TOM1L1-216ENST00000573607 ATMINO43313 823 aaPredicted RBP13.54□□□□□ -0.24
TOM1L1-216ENST00000573607 PDE4AP27815 886 aa13.52□□□□□ -0.25
TOM1L1-216ENST00000573607 CLCN6P51797 869 aa13.52□□□□□ -0.25
TOM1L1-216ENST00000573607 CRISPLD2Q9H0B8 497 aa13.52□□□□□ -0.25
TOM1L1-216ENST00000573607 E2F4Q16254 413 aa13.51□□□□□ -0.25
TOM1L1-216ENST00000573607 GABBR2O75899 941 aa13.49□□□□□ -0.25
TOM1L1-216ENST00000573607 ASTLQ6HA08 431 aaPredicted RBP13.49□□□□□ -0.25
TOM1L1-216ENST00000573607 MFSD10Q14728 455 aa13.48□□□□□ -0.25
TOM1L1-216ENST00000573607 PDCD7Q8N8D1 485 aaKnown RBP13.48□□□□□ -0.25
TOM1L1-216ENST00000573607 IRX5P78411 483 aaPredicted RBP13.45□□□□□ -0.26
TOM1L1-216ENST00000573607 DDX27Q96GQ7 796 aaKnown RBP13.45□□□□□ -0.26
TOM1L1-216ENST00000573607 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
TOM1L1-216ENST00000573607 POTEHQ6S545 545 aa13.42□□□□□ -0.26
TOM1L1-216ENST00000573607 MICALL2Q8IY33 904 aa13.42□□□□□ -0.26
TOM1L1-216ENST00000573607 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
TOM1L1-216ENST00000573607 OCEL1Q9H607 264 aa13.4□□□□□ -0.26
TOM1L1-216ENST00000573607 SEMA3EO15041 775 aa13.38□□□□□ -0.27
TOM1L1-216ENST00000573607 IER5LQ5T953 404 aa13.38□□□□□ -0.27
TOM1L1-216ENST00000573607 GPHNQ9NQX3 736 aaPredicted RBP13.38□□□□□ -0.27
TOM1L1-216ENST00000573607 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms