RNA–Protein interactions for RNA: ENST00000572988.1

NCBP3-202, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 3

Gene NCBP3, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-202ENST00000572988 PHF12Q96QT6 1004 aa10.77□□□□□ -0.69
NCBP3-202ENST00000572988 PAK3O75914 559 aaPredicted RBP10.71□□□□□ -0.69
NCBP3-202ENST00000572988 IFNLR1Q8IU57 520 aaPredicted RBP10.71□□□□□ -0.69
NCBP3-202ENST00000572988 PLSCR2Q9NRY7 297 aa10.66□□□□□ -0.7
NCBP3-202ENST00000572988 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
NCBP3-202ENST00000572988 PELP1Q8IZL8 1130 aaKnown RBP10.65□□□□□ -0.7
NCBP3-202ENST00000572988 SPOCK2Q92563 424 aa10.64□□□□□ -0.71
NCBP3-202ENST00000572988 TSPYL2Q9H2G4 693 aaPredicted RBP10.61□□□□□ -0.71
NCBP3-202ENST00000572988 MS4A3Q96HJ5 214 aa10.6□□□□□ -0.71
NCBP3-202ENST00000572988 NUBP1P53384 320 aa10.59□□□□□ -0.71
NCBP3-202ENST00000572988 OTUD5Q96G74 571 aa10.59□□□□□ -0.71
NCBP3-202ENST00000572988 DCAF8Q5TAQ9 597 aa10.58□□□□□ -0.72
NCBP3-202ENST00000572988 RASEFQ8IZ41 740 aa10.58□□□□□ -0.72
NCBP3-202ENST00000572988 FAM212AQ96EL1 285 aa10.56□□□□□ -0.72
NCBP3-202ENST00000572988 ABCC9O60706 1549 aa10.55□□□□□ -0.72
NCBP3-202ENST00000572988 CCDC61Q9Y6R9 512 aa10.54□□□□□ -0.72
NCBP3-202ENST00000572988 ATMINO43313 823 aaPredicted RBP10.53□□□□□ -0.72
NCBP3-202ENST00000572988 CIZ1Q9ULV3 898 aaPredicted RBP10.53□□□□□ -0.72
NCBP3-202ENST00000572988 ASTLQ6HA08 431 aaPredicted RBP10.52□□□□□ -0.73
NCBP3-202ENST00000572988 GSE1Q14687 1217 aa10.51□□□□□ -0.73
NCBP3-202ENST00000572988 KIF12Q96FN5 646 aa10.49□□□□□ -0.73
NCBP3-202ENST00000572988 POTEJP0CG39 1038 aa10.48□□□□□ -0.73
NCBP3-202ENST00000572988 METRNQ9UJH8 293 aa10.48□□□□□ -0.73
NCBP3-202ENST00000572988 ATN1P54259 1190 aaPredicted RBP10.46□□□□□ -0.73
NCBP3-202ENST00000572988 TRPC6Q9Y210 931 aa10.46□□□□□ -0.73
NCBP3-202ENST00000572988 C7P10643 843 aa10.44□□□□□ -0.74
NCBP3-202ENST00000572988 SLC39A7Q92504 469 aa10.44□□□□□ -0.74
NCBP3-202ENST00000572988 MAP3K13O43283 966 aa10.43□□□□□ -0.74
NCBP3-202ENST00000572988 PYGBP11216 843 aa10.42□□□□□ -0.74
NCBP3-202ENST00000572988 BMP2KQ9NSY1 1161 aaPredicted RBP10.4□□□□□ -0.74
NCBP3-202ENST00000572988 POTEFA5A3E0 1075 aa10.37□□□□□ -0.75
NCBP3-202ENST00000572988 CCDC180Q9P1Z9 1646 aa10.36□□□□□ -0.75
NCBP3-202ENST00000572988 TRIM41Q8WV44 630 aa10.35□□□□□ -0.75
NCBP3-202ENST00000572988 PCDHB13Q9Y5F0 798 aa10.34□□□□□ -0.75
NCBP3-202ENST00000572988 POTEMA6NI47 508 aa10.33□□□□□ -0.76
NCBP3-202ENST00000572988 ECM2O94769 699 aaPredicted RBP10.33□□□□□ -0.76
NCBP3-202ENST00000572988 CHRM1P11229 460 aaPredicted RBP10.32□□□□□ -0.76
NCBP3-202ENST00000572988 TIE1P35590 1138 aa10.31□□□□□ -0.76
NCBP3-202ENST00000572988 PKD2Q13563 968 aa10.31□□□□□ -0.76
NCBP3-202ENST00000572988 TTLL13PA6NNM8 815 aa10.3□□□□□ -0.76
NCBP3-202ENST00000572988 POTEGQ6S5H5 508 aa10.3□□□□□ -0.76
NCBP3-202ENST00000572988 SGIP1Q9BQI5 828 aa10.29□□□□□ -0.76
NCBP3-202ENST00000572988 COLQQ9Y215 455 aaPredicted RBP10.29□□□□□ -0.76
NCBP3-202ENST00000572988 AMER1Q5JTC6 1135 aaPredicted RBP10.28□□□□□ -0.76
NCBP3-202ENST00000572988 MAMSTRQ6ZN01 415 aa10.28□□□□□ -0.76
NCBP3-202ENST00000572988 IFNL1Q8IU54 200 aa10.27□□□□□ -0.77
NCBP3-202ENST00000572988 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.77
NCBP3-202ENST00000572988 ZNF467Q7Z7K2 595 aaPredicted RBP10.26□□□□□ -0.77
NCBP3-202ENST00000572988 LCE2DQ5TA82 110 aaPredicted RBP10.24□□□□□ -0.77
NCBP3-202ENST00000572988 FAM163AQ96GL9 167 aaPredicted RBP10.24□□□□□ -0.77
NCBP3-202ENST00000572988 SCUBE2Q9NQ36 999 aa10.24□□□□□ -0.77
NCBP3-202ENST00000572988 TRIM35Q9UPQ4 493 aa10.24□□□□□ -0.77
NCBP3-202ENST00000572988 SEC24BO95487 1268 aa10.23□□□□□ -0.77
NCBP3-202ENST00000572988 RTN4Q9NQC3 1192 aaKnown RBP10.23□□□□□ -0.77
NCBP3-202ENST00000572988 RIOK3O14730 519 aaKnown RBP10.2□□□□□ -0.78
NCBP3-202ENST00000572988 RGL2O15211 777 aa10.19□□□□□ -0.78
NCBP3-202ENST00000572988 RNF25Q96BH1 459 aaPredicted RBP10.17□□□□□ -0.78
NCBP3-202ENST00000572988 TMEM106CQ9BVX2 250 aa10.17□□□□□ -0.78
NCBP3-202ENST00000572988 DCAF8L2P0C7V8 631 aa10.16□□□□□ -0.78
NCBP3-202ENST00000572988 PSEN1P49768 467 aa10.16□□□□□ -0.78
NCBP3-202ENST00000572988 PDAP1Q13442 181 aaKnown RBP10.16□□□□□ -0.78
NCBP3-202ENST00000572988 TAOK2Q9UL54 1235 aa10.16□□□□□ -0.78
NCBP3-202ENST00000572988 IER5LQ5T953 404 aa10.15□□□□□ -0.78
NCBP3-202ENST00000572988 VGFO15240 615 aaPredicted RBP10.13□□□□□ -0.79
NCBP3-202ENST00000572988 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.09□□□□□ -0.79
NCBP3-202ENST00000572988 GOLGA2Q08379 1002 aa10.09□□□□□ -0.79
NCBP3-202ENST00000572988 ZFP91Q96JP5 570 aaPredicted RBP10.09□□□□□ -0.79
NCBP3-202ENST00000572988 IRX5P78411 483 aaPredicted RBP10.08□□□□□ -0.8
NCBP3-202ENST00000572988 PCDH10Q9P2E7 1040 aa10.08□□□□□ -0.8
NCBP3-202ENST00000572988 STK25O00506 426 aa10.06□□□□□ -0.8
NCBP3-202ENST00000572988 PLCG2P16885 1265 aa10.06□□□□□ -0.8
NCBP3-202ENST00000572988 SLAIN1Q8ND83 568 aa10.06□□□□□ -0.8
NCBP3-202ENST00000572988 CABP2Q9NPB3 220 aa10.05□□□□□ -0.8
NCBP3-202ENST00000572988 STK24Q9Y6E0 443 aa10.05□□□□□ -0.8
NCBP3-202ENST00000572988 BCL11BQ9C0K0 894 aaPredicted RBP10.04□□□□□ -0.8
NCBP3-202ENST00000572988 CHGAP10645 457 aaKnown RBP10.03□□□□□ -0.8
NCBP3-202ENST00000572988 MKRN3Q13064 507 aaKnown RBP10.03□□□□□ -0.8
NCBP3-202ENST00000572988 OCEL1Q9H607 264 aa10.01□□□□□ -0.81
NCBP3-202ENST00000572988 ST18O60284 1047 aa9.99□□□□□ -0.81
NCBP3-202ENST00000572988 EFCAB3Q8N7B9 438 aa9.97□□□□□ -0.81
NCBP3-202ENST00000572988 CDAN1Q8IWY9 1227 aa9.96□□□□□ -0.82
NCBP3-202ENST00000572988 HS6ST3Q8IZP7 471 aa9.96□□□□□ -0.82
NCBP3-202ENST00000572988 RB1CC1Q8TDY2 1594 aa9.94□□□□□ -0.82
NCBP3-202ENST00000572988 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.93□□□□□ -0.82
NCBP3-202ENST00000572988 SOX12O15370 315 aa9.91□□□□□ -0.82
NCBP3-202ENST00000572988 PDCD7Q8N8D1 485 aaKnown RBP9.91□□□□□ -0.82
NCBP3-202ENST00000572988 NACADO15069 1562 aa9.89□□□□□ -0.83
NCBP3-202ENST00000572988 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.89□□□□□ -0.83
NCBP3-202ENST00000572988 PHF8Q9UPP1 1060 aa9.88□□□□□ -0.83
NCBP3-202ENST00000572988 NLRP6P59044 892 aa9.87□□□□□ -0.83
NCBP3-202ENST00000572988 MARVELD3Q96A59 401 aa9.84□□□□□ -0.83
NCBP3-202ENST00000572988 MFRPQ9BY79 579 aa9.83□□□□□ -0.84
NCBP3-202ENST00000572988 DPY19L2Q6NUT2 758 aa9.82□□□□□ -0.84
NCBP3-202ENST00000572988 BBXQ8WY36 941 aaPredicted RBP9.82□□□□□ -0.84
NCBP3-202ENST00000572988 G3V3G9 751 aa9.81□□□□□ -0.84
NCBP3-202ENST00000572988 NKX1-1Q15270 411 aaPredicted RBP9.81□□□□□ -0.84
NCBP3-202ENST00000572988 SNPHO15079 494 aa9.8□□□□□ -0.84
NCBP3-202ENST00000572988 C3orf67Q6ZVT6 689 aa9.8□□□□□ -0.84
NCBP3-202ENST00000572988 L3MBTL3Q96JM7 780 aaPredicted RBP9.8□□□□□ -0.84
NCBP3-202ENST00000572988 DNAJC5Q9H3Z4 198 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms