RNA–Protein interactions for RNA: ENST00000569395.5

SCAPER-222, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 558 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-222	ENST00000569395	PELP1	Q8IZL8	1130 aa	Known RBP	11.15	□□□□□ -0.62
SCAPER-222	ENST00000569395	MIER1	Q8N108	512 aa		11.15	□□□□□ -0.62
SCAPER-222	ENST00000569395	MAMSTR	Q6ZN01	415 aa		11.14	□□□□□ -0.63
SCAPER-222	ENST00000569395	PLCD3	Q8N3E9	789 aa		11.14	□□□□□ -0.63
SCAPER-222	ENST00000569395	CREBZF	Q9NS37	354 aa		11.14	□□□□□ -0.63
SCAPER-222	ENST00000569395	PLEKHG5	O94827	1062 aa		11.13	□□□□□ -0.63
SCAPER-222	ENST00000569395	CDAN1	Q8IWY9	1227 aa		11.09	□□□□□ -0.63
SCAPER-222	ENST00000569395	METRN	Q9UJH8	293 aa		11.08	□□□□□ -0.64
SCAPER-222	ENST00000569395	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.04	□□□□□ -0.64
SCAPER-222	ENST00000569395	C7	P10643	843 aa		11.02	□□□□□ -0.65
SCAPER-222	ENST00000569395	MNX1	P50219	401 aa	Predicted RBP	11.02	□□□□□ -0.65
SCAPER-222	ENST00000569395	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.02	□□□□□ -0.65
SCAPER-222	ENST00000569395	SLC39A7	Q92504	469 aa		11	□□□□□ -0.65
SCAPER-222	ENST00000569395	SCUBE2	Q9NQ36	999 aa		11	□□□□□ -0.65
SCAPER-222	ENST00000569395	KLHL34	Q8N239	644 aa		10.99	□□□□□ -0.65
SCAPER-222	ENST00000569395	PHF12	Q96QT6	1004 aa		10.98	□□□□□ -0.65
SCAPER-222	ENST00000569395	NPM1	P06748	294 aa	Known RBP eCLIP	10.97	□□□□□ -0.65
SCAPER-222	ENST00000569395	ASTL	Q6HA08	431 aa	Predicted RBP	10.97	□□□□□ -0.65
SCAPER-222	ENST00000569395	MMRN1	Q13201	1228 aa		10.93	□□□□□ -0.66
SCAPER-222	ENST00000569395	ATMIN	O43313	823 aa	Predicted RBP	10.92	□□□□□ -0.66
SCAPER-222	ENST00000569395	PAK3	O75914	559 aa	Predicted RBP	10.9	□□□□□ -0.66
SCAPER-222	ENST00000569395	SPOCK2	Q92563	424 aa		10.9	□□□□□ -0.66
SCAPER-222	ENST00000569395	NUBP1	P53384	320 aa		10.87	□□□□□ -0.67
SCAPER-222	ENST00000569395	SPNS2	Q8IVW8	549 aa		10.85	□□□□□ -0.67
SCAPER-222	ENST00000569395	RASEF	Q8IZ41	740 aa		10.83	□□□□□ -0.68
SCAPER-222	ENST00000569395	FAM212A	Q96EL1	285 aa		10.8	□□□□□ -0.68
SCAPER-222	ENST00000569395	MS4A3	Q96HJ5	214 aa		10.8	□□□□□ -0.68
SCAPER-222	ENST00000569395	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.78	□□□□□ -0.68
SCAPER-222	ENST00000569395	GSE1	Q14687	1217 aa		10.76	□□□□□ -0.69
SCAPER-222	ENST00000569395	DCAF8	Q5TAQ9	597 aa		10.76	□□□□□ -0.69
SCAPER-222	ENST00000569395	POTEF	A5A3E0	1075 aa		10.75	□□□□□ -0.69
SCAPER-222	ENST00000569395	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.74	□□□□□ -0.69
SCAPER-222	ENST00000569395	ATN1	P54259	1190 aa	Predicted RBP	10.73	□□□□□ -0.69
SCAPER-222	ENST00000569395	ST18	O60284	1047 aa		10.72	□□□□□ -0.69
SCAPER-222	ENST00000569395	CCDC61	Q9Y6R9	512 aa		10.7	□□□□□ -0.7
SCAPER-222	ENST00000569395	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.68	□□□□□ -0.7
SCAPER-222	ENST00000569395	TRIM41	Q8WV44	630 aa		10.66	□□□□□ -0.7
SCAPER-222	ENST00000569395	PKD2	Q13563	968 aa		10.64	□□□□□ -0.71
SCAPER-222	ENST00000569395	PYGB	P11216	843 aa		10.62	□□□□□ -0.71
SCAPER-222	ENST00000569395	CHRM1	P11229	460 aa	Predicted RBP	10.61	□□□□□ -0.71
SCAPER-222	ENST00000569395	RTN4	Q9NQC3	1192 aa	Known RBP	10.61	□□□□□ -0.71
SCAPER-222	ENST00000569395	KIF12	Q96FN5	646 aa		10.6	□□□□□ -0.71
SCAPER-222	ENST00000569395	ECM2	O94769	699 aa	Predicted RBP	10.59	□□□□□ -0.71
SCAPER-222	ENST00000569395	MAP3K13	O43283	966 aa		10.56	□□□□□ -0.72
SCAPER-222	ENST00000569395	SGIP1	Q9BQI5	828 aa		10.56	□□□□□ -0.72
SCAPER-222	ENST00000569395	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.56	□□□□□ -0.72
SCAPER-222	ENST00000569395	COLQ	Q9Y215	455 aa	Predicted RBP	10.56	□□□□□ -0.72
SCAPER-222	ENST00000569395	SLAIN1	Q8ND83	568 aa		10.55	□□□□□ -0.72
SCAPER-222	ENST00000569395	PCDHB13	Q9Y5F0	798 aa		10.54	□□□□□ -0.72
SCAPER-222	ENST00000569395	SEC24B	O95487	1268 aa		10.53	□□□□□ -0.72
SCAPER-222	ENST00000569395	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.52	□□□□□ -0.73
SCAPER-222	ENST00000569395	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.5	□□□□□ -0.73
SCAPER-222	ENST00000569395	IFNL1	Q8IU54	200 aa		10.49	□□□□□ -0.73
SCAPER-222	ENST00000569395	RGL2	O15211	777 aa		10.48	□□□□□ -0.73
SCAPER-222	ENST00000569395	RNF25	Q96BH1	459 aa	Predicted RBP	10.48	□□□□□ -0.73
SCAPER-222	ENST00000569395	RIOK3	O14730	519 aa	Known RBP	10.47	□□□□□ -0.73
SCAPER-222	ENST00000569395	PCDHB8	Q9UN66	801 aa		10.47	□□□□□ -0.73
SCAPER-222	ENST00000569395	TRPC6	Q9Y210	931 aa		10.47	□□□□□ -0.73
SCAPER-222	ENST00000569395	TIE1	P35590	1138 aa		10.46	□□□□□ -0.73
SCAPER-222	ENST00000569395	MARVELD3	Q96A59	401 aa		10.42	□□□□□ -0.74
SCAPER-222	ENST00000569395	PDAP1	Q13442	181 aa	Known RBP	10.41	□□□□□ -0.74
SCAPER-222	ENST00000569395	TAOK2	Q9UL54	1235 aa		10.41	□□□□□ -0.74
SCAPER-222	ENST00000569395	VGF	O15240	615 aa	Predicted RBP	10.4	□□□□□ -0.74
SCAPER-222	ENST00000569395	PSEN1	P49768	467 aa		10.38	□□□□□ -0.75
SCAPER-222	ENST00000569395	IER5L	Q5T953	404 aa		10.38	□□□□□ -0.75
SCAPER-222	ENST00000569395	TTLL13P	A6NNM8	815 aa		10.37	□□□□□ -0.75
SCAPER-222	ENST00000569395	KRTAP3-3	Q9BYR6	98 aa		10.36	□□□□□ -0.75
SCAPER-222	ENST00000569395	KRTAP3-2	Q9BYR7	98 aa		10.36	□□□□□ -0.75
SCAPER-222	ENST00000569395	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.35	□□□□□ -0.75
SCAPER-222	ENST00000569395	SNPH	O15079	494 aa		10.35	□□□□□ -0.75
SCAPER-222	ENST00000569395	DCAF8L2	P0C7V8	631 aa		10.35	□□□□□ -0.75
SCAPER-222	ENST00000569395	ZFP91	Q96JP5	570 aa	Predicted RBP	10.35	□□□□□ -0.75
SCAPER-222	ENST00000569395	TMEM106C	Q9BVX2	250 aa		10.35	□□□□□ -0.75
SCAPER-222	ENST00000569395	STK25	O00506	426 aa		10.3	□□□□□ -0.76
SCAPER-222	ENST00000569395	TRIM35	Q9UPQ4	493 aa		10.3	□□□□□ -0.76
SCAPER-222	ENST00000569395	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.29	□□□□□ -0.76
SCAPER-222	ENST00000569395	CHGA	P10645	457 aa	Known RBP	10.27	□□□□□ -0.77
SCAPER-222	ENST00000569395	HS6ST3	Q8IZP7	471 aa		10.27	□□□□□ -0.77
SCAPER-222	ENST00000569395	STK24	Q9Y6E0	443 aa		10.27	□□□□□ -0.77
SCAPER-222	ENST00000569395	EMP3	P54852	163 aa		10.25	□□□□□ -0.77
SCAPER-222	ENST00000569395	CABP2	Q9NPB3	220 aa		10.25	□□□□□ -0.77
SCAPER-222	ENST00000569395	GOLGA2	Q08379	1002 aa		10.24	□□□□□ -0.77
SCAPER-222	ENST00000569395	POTEB3	A0JP26	581 aa		10.23	□□□□□ -0.77
SCAPER-222	ENST00000569395	POTEB	Q6S5H4	581 aa		10.23	□□□□□ -0.77
SCAPER-222	ENST00000569395	HS3ST6	Q96QI5	342 aa		10.22	□□□□□ -0.77
SCAPER-222	ENST00000569395	PLCG2	P16885	1265 aa		10.21	□□□□□ -0.77
SCAPER-222	ENST00000569395	MKRN3	Q13064	507 aa	Known RBP	10.21	□□□□□ -0.77
SCAPER-222	ENST00000569395	EFCAB3	Q8N7B9	438 aa		10.19	□□□□□ -0.78
SCAPER-222	ENST00000569395	DNAJC5	Q9H3Z4	198 aa		10.19	□□□□□ -0.78
SCAPER-222	ENST00000569395	FAM205C	A6NFA0	338 aa		10.17	□□□□□ -0.78
SCAPER-222	ENST00000569395	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.16	□□□□□ -0.78
SCAPER-222	ENST00000569395	SOX12	O15370	315 aa		10.15	□□□□□ -0.78
SCAPER-222	ENST00000569395	RNF166	Q96A37	237 aa	Predicted RBP	10.15	□□□□□ -0.78
SCAPER-222	ENST00000569395	IRX5	P78411	483 aa	Predicted RBP	10.13	□□□□□ -0.79
SCAPER-222	ENST00000569395	BBX	Q8WY36	941 aa	Predicted RBP	10.13	□□□□□ -0.79
SCAPER-222	ENST00000569395	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
SCAPER-222	ENST00000569395	NKX1-1	Q15270	411 aa	Predicted RBP	10.11	□□□□□ -0.79
SCAPER-222	ENST00000569395	ILDR1	Q86SU0	546 aa	Predicted RBP	10.1	□□□□□ -0.79
SCAPER-222	ENST00000569395	MFRP	Q9BY79	579 aa		10.1	□□□□□ -0.79
SCAPER-222	ENST00000569395	OCEL1	Q9H607	264 aa		10.1	□□□□□ -0.79

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