RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 FARP1Q9Y4F1 1045 aaPredicted RBP15.86■□□□□ 0.13
CDH11-216ENST00000569128 FXR2P51116 673 aaKnown RBP eCLIP15.85■□□□□ 0.13
CDH11-216ENST00000569128 CHRDL2Q6WN34 429 aa15.85■□□□□ 0.13
CDH11-216ENST00000569128 RNF25Q96BH1 459 aaPredicted RBP15.83■□□□□ 0.12
CDH11-216ENST00000569128 CHGAP10645 457 aaKnown RBP15.8■□□□□ 0.12
CDH11-216ENST00000569128 BBXQ8WY36 941 aaPredicted RBP15.8■□□□□ 0.12
CDH11-216ENST00000569128 PIP4P2Q8N4L2 257 aa15.76■□□□□ 0.11
CDH11-216ENST00000569128 TSPYL2Q9H2G4 693 aaPredicted RBP15.76■□□□□ 0.11
CDH11-216ENST00000569128 PYGBP11216 843 aa15.75■□□□□ 0.11
CDH11-216ENST00000569128 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.75■□□□□ 0.11
CDH11-216ENST00000569128 RIOK3O14730 519 aaKnown RBP15.74■□□□□ 0.11
CDH11-216ENST00000569128 CHRM1P11229 460 aaPredicted RBP15.74■□□□□ 0.11
CDH11-216ENST00000569128 HAP1P54257 671 aaPredicted RBP15.7■□□□□ 0.1
CDH11-216ENST00000569128 PAXIP1Q6ZW49 1069 aaPredicted RBP15.67■□□□□ 0.1
CDH11-216ENST00000569128 HS6ST3Q8IZP7 471 aa15.67■□□□□ 0.1
CDH11-216ENST00000569128 CFAP44Q96MT7 982 aa15.65■□□□□ 0.1
CDH11-216ENST00000569128 TAOK2Q9UL54 1235 aa15.65■□□□□ 0.1
CDH11-216ENST00000569128 VGFO15240 615 aaPredicted RBP15.62■□□□□ 0.09
CDH11-216ENST00000569128 STK25O00506 426 aa15.58■□□□□ 0.08
CDH11-216ENST00000569128 CCDC61Q9Y6R9 512 aa15.58■□□□□ 0.08
CDH11-216ENST00000569128 SPRYD3Q8NCJ5 442 aa15.57■□□□□ 0.08
CDH11-216ENST00000569128 PAK3O75914 559 aaPredicted RBP15.56■□□□□ 0.08
CDH11-216ENST00000569128 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.54■□□□□ 0.08
CDH11-216ENST00000569128 ZFP91Q96JP5 570 aaPredicted RBP15.54■□□□□ 0.08
CDH11-216ENST00000569128 SGIP1Q9BQI5 828 aa15.51■□□□□ 0.07
CDH11-216ENST00000569128 DNAJC5Q9H3Z4 198 aa15.51■□□□□ 0.07
CDH11-216ENST00000569128 BCL11BQ9C0K0 894 aaPredicted RBP15.5■□□□□ 0.07
CDH11-216ENST00000569128 ZNF467Q7Z7K2 595 aaPredicted RBP15.49■□□□□ 0.07
CDH11-216ENST00000569128 PCDHB8Q9UN66 801 aa15.49■□□□□ 0.07
CDH11-216ENST00000569128 PCDHB13Q9Y5F0 798 aa15.49■□□□□ 0.07
CDH11-216ENST00000569128 STK24Q9Y6E0 443 aa15.49■□□□□ 0.07
CDH11-216ENST00000569128 NKX1-1Q15270 411 aaPredicted RBP15.48■□□□□ 0.07
CDH11-216ENST00000569128 CD44P16070 742 aaKnown RBP15.45■□□□□ 0.06
CDH11-216ENST00000569128 ABCC9O60706 1549 aa15.44■□□□□ 0.06
CDH11-216ENST00000569128 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
CDH11-216ENST00000569128 VSIG10Q8N0Z9 540 aa15.41■□□□□ 0.06
CDH11-216ENST00000569128 MAP3K13O43283 966 aa15.4■□□□□ 0.06
CDH11-216ENST00000569128 PDAP1Q13442 181 aaKnown RBP15.4■□□□□ 0.06
CDH11-216ENST00000569128 ZNF579Q8NAF0 562 aaKnown RBP15.4■□□□□ 0.06
CDH11-216ENST00000569128 KIF12Q96FN5 646 aa15.4■□□□□ 0.06
CDH11-216ENST00000569128 TSHZ2Q9NRE2 1034 aa15.4■□□□□ 0.06
CDH11-216ENST00000569128 IFNL1Q8IU54 200 aa15.37■□□□□ 0.05
CDH11-216ENST00000569128 GTPBP6O43824 516 aaPredicted RBP15.36■□□□□ 0.05
CDH11-216ENST00000569128 PSEN1P49768 467 aa15.35■□□□□ 0.05
CDH11-216ENST00000569128 PHF12Q96QT6 1004 aa15.35■□□□□ 0.05
CDH11-216ENST00000569128 KDM2AQ9Y2K7 1162 aa15.33■□□□□ 0.04
CDH11-216ENST00000569128 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
CDH11-216ENST00000569128 ZCCHC6Q5VYS8 1495 aaKnown RBP15.22■□□□□ 0.03
CDH11-216ENST00000569128 RYDENQ9NUL5 291 aaKnown RBP15.22■□□□□ 0.03
CDH11-216ENST00000569128 MS4A3Q96HJ5 214 aa15.17■□□□□ 0.02
CDH11-216ENST00000569128 CABP2Q9NPB3 220 aa15.17■□□□□ 0.02
CDH11-216ENST00000569128 HAX1O00165 279 aa15.15■□□□□ 0.02
CDH11-216ENST00000569128 EFCAB3Q8N7B9 438 aa15.14■□□□□ 0.01
CDH11-216ENST00000569128 MFRPQ9BY79 579 aa15.14■□□□□ 0.01
CDH11-216ENST00000569128 TRPC6Q9Y210 931 aa15.13■□□□□ 0.01
CDH11-216ENST00000569128 TMEM106CQ9BVX2 250 aa15.09■□□□□ 0.01
CDH11-216ENST00000569128 EVX2Q03828 476 aa15.07■□□□□ 0
CDH11-216ENST00000569128 BCANQ96GW7 911 aa15.05■□□□□ -0
CDH11-216ENST00000569128 PHF8Q9UPP1 1060 aa15.05■□□□□ -0
CDH11-216ENST00000569128 SOX12O15370 315 aa15.04■□□□□ -0
CDH11-216ENST00000569128 NLRP6P59044 892 aa15.03■□□□□ -0
CDH11-216ENST00000569128 GOLGA2Q08379 1002 aa15.02■□□□□ -0
CDH11-216ENST00000569128 FBXO22Q8NEZ5 403 aa15.02■□□□□ -0
CDH11-216ENST00000569128 GALR2O43603 387 aaPredicted RBP15□□□□□ -0.01
CDH11-216ENST00000569128 DCAF1Q9Y4B6 1507 aa15□□□□□ -0.01
CDH11-216ENST00000569128 PPP1R37O75864 691 aa14.98□□□□□ -0.01
CDH11-216ENST00000569128 TIE1P35590 1138 aa14.98□□□□□ -0.01
CDH11-216ENST00000569128 TTLL13PA6NNM8 815 aa14.96□□□□□ -0.01
CDH11-216ENST00000569128 CADPS2Q86UW7 1296 aa14.96□□□□□ -0.01
CDH11-216ENST00000569128 BMP2KQ9NSY1 1161 aaPredicted RBP14.95□□□□□ -0.02
CDH11-216ENST00000569128 NACADO15069 1562 aa14.94□□□□□ -0.02
CDH11-216ENST00000569128 MKRN3Q13064 507 aaKnown RBP14.93□□□□□ -0.02
CDH11-216ENST00000569128 MYO15BQ96JP2 1530 aa14.92□□□□□ -0.02
CDH11-216ENST00000569128 MS4A4AQ96JQ5 239 aa14.91□□□□□ -0.02
CDH11-216ENST00000569128 CLCN6P51797 869 aa14.9□□□□□ -0.02
CDH11-216ENST00000569128 RB1CC1Q8TDY2 1594 aa14.88□□□□□ -0.03
CDH11-216ENST00000569128 TRIM35Q9UPQ4 493 aa14.87□□□□□ -0.03
CDH11-216ENST00000569128 PRKCSHP14314 528 aaPredicted RBP14.86□□□□□ -0.03
CDH11-216ENST00000569128 POTEHQ6S545 545 aa14.83□□□□□ -0.04
CDH11-216ENST00000569128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.82□□□□□ -0.04
CDH11-216ENST00000569128 WDR70Q9NW82 654 aa14.81□□□□□ -0.04
CDH11-216ENST00000569128 ATN1P54259 1190 aaPredicted RBP14.8□□□□□ -0.04
CDH11-216ENST00000569128 NBR1Q14596 966 aa14.79□□□□□ -0.04
CDH11-216ENST00000569128 GABBR2O75899 941 aa14.78□□□□□ -0.04
CDH11-216ENST00000569128 ATMINO43313 823 aaPredicted RBP14.77□□□□□ -0.05
CDH11-216ENST00000569128 ILDR1Q86SU0 546 aaPredicted RBP14.76□□□□□ -0.05
CDH11-216ENST00000569128 ASTLQ6HA08 431 aaPredicted RBP14.74□□□□□ -0.05
CDH11-216ENST00000569128 SHROOM4Q9ULL8 1493 aa14.74□□□□□ -0.05
CDH11-216ENST00000569128 SCRIBQ14160 1630 aa14.7□□□□□ -0.06
CDH11-216ENST00000569128 DPY19L2Q6NUT2 758 aa14.7□□□□□ -0.06
CDH11-216ENST00000569128 P3H3Q8IVL6 736 aa14.7□□□□□ -0.06
CDH11-216ENST00000569128 NCKAP5LQ9HCH0 1330 aa14.69□□□□□ -0.06
CDH11-216ENST00000569128 KCNV2Q8TDN2 545 aa14.68□□□□□ -0.06
CDH11-216ENST00000569128 PDCD7Q8N8D1 485 aaKnown RBP14.66□□□□□ -0.06
CDH11-216ENST00000569128 LARP6Q9BRS8 491 aaKnown RBP14.66□□□□□ -0.06
CDH11-216ENST00000569128 PDE4AP27815 886 aa14.65□□□□□ -0.06
CDH11-216ENST00000569128 IRX5P78411 483 aaPredicted RBP14.65□□□□□ -0.06
CDH11-216ENST00000569128 DCBLD2Q96PD2 775 aa14.65□□□□□ -0.06
CDH11-216ENST00000569128 IER5LQ5T953 404 aa14.64□□□□□ -0.07
CDH11-216ENST00000569128 CRISPLD2Q9H0B8 497 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms