RNA–Protein interactions for RNA: ENST00000566440.1

AP001527.1-201, humanhuman

BASIC

Gene AP001527.1, Length 1,957 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001527.1-201ENST00000566440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.84□□□□□ -0.35
AP001527.1-201ENST00000566440 PPARGC1BQ86YN6 1023 aaKnown RBP12.83□□□□□ -0.35
AP001527.1-201ENST00000566440 BRPF1P55201 1214 aaPredicted RBP12.81□□□□□ -0.36
AP001527.1-201ENST00000566440 PKD2Q13563 968 aa12.79□□□□□ -0.36
AP001527.1-201ENST00000566440 RSPH4AQ5TD94 716 aa12.78□□□□□ -0.36
AP001527.1-201ENST00000566440 DNAJC5Q9H3Z4 198 aa12.78□□□□□ -0.36
AP001527.1-201ENST00000566440 C1orf115Q9H7X2 142 aa12.77□□□□□ -0.37
AP001527.1-201ENST00000566440 RSPH6AQ9H0K4 717 aa12.76□□□□□ -0.37
AP001527.1-201ENST00000566440 ZMYND15Q9H091 742 aa12.76□□□□□ -0.37
AP001527.1-201ENST00000566440 ZNF326Q5BKZ1 582 aaKnown RBP12.73□□□□□ -0.37
AP001527.1-201ENST00000566440 RAD21O60216 631 aa12.71□□□□□ -0.37
AP001527.1-201ENST00000566440 SPRYD3Q8NCJ5 442 aa12.71□□□□□ -0.37
AP001527.1-201ENST00000566440 KCTD17Q8N5Z5 321 aa12.7□□□□□ -0.38
AP001527.1-201ENST00000566440 ZNF428Q96B54 188 aa12.69□□□□□ -0.38
AP001527.1-201ENST00000566440 CCDC136Q96JN2 1154 aa12.69□□□□□ -0.38
AP001527.1-201ENST00000566440 IRX6P78412 446 aaPredicted RBP12.67□□□□□ -0.38
AP001527.1-201ENST00000566440 RGS22Q8NE09 1264 aa12.67□□□□□ -0.38
AP001527.1-201ENST00000566440 TICAM2Q86XR7 235 aa12.65□□□□□ -0.38
AP001527.1-201ENST00000566440 RB1CC1Q8TDY2 1594 aa12.65□□□□□ -0.38
AP001527.1-201ENST00000566440 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.64□□□□□ -0.39
AP001527.1-201ENST00000566440 BRPF3Q9ULD4 1205 aa12.63□□□□□ -0.39
AP001527.1-201ENST00000566440 ZNF592Q92610 1267 aa12.63□□□□□ -0.39
AP001527.1-201ENST00000566440 RBM25P49756 843 aaKnown RBP12.62□□□□□ -0.39
AP001527.1-201ENST00000566440 MTMR7Q9Y216 660 aa12.62□□□□□ -0.39
AP001527.1-201ENST00000566440 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
AP001527.1-201ENST00000566440 ZFP91Q96JP5 570 aaPredicted RBP12.6□□□□□ -0.39
AP001527.1-201ENST00000566440 RSF1Q96T23 1441 aaPredicted RBP12.57□□□□□ -0.4
AP001527.1-201ENST00000566440 ARID3CA6NKF2 412 aa12.56□□□□□ -0.4
AP001527.1-201ENST00000566440 CLSTN1O94985 981 aa12.56□□□□□ -0.4
AP001527.1-201ENST00000566440 FOXD4L5Q5VV16 416 aaPredicted RBP12.56□□□□□ -0.4
AP001527.1-201ENST00000566440 FOXD4L4Q8WXT5 416 aaPredicted RBP12.56□□□□□ -0.4
AP001527.1-201ENST00000566440 A0A0U1RQG5 324 aaPredicted RBP12.55□□□□□ -0.4
AP001527.1-201ENST00000566440 CENPBP07199 599 aaPredicted RBP12.54□□□□□ -0.4
AP001527.1-201ENST00000566440 PSMD1Q99460 953 aa12.54□□□□□ -0.4
AP001527.1-201ENST00000566440 FAM177A1Q8N128 213 aaPredicted RBP12.54□□□□□ -0.4
AP001527.1-201ENST00000566440 NAP1L5Q96NT1 182 aaPredicted RBP12.54□□□□□ -0.4
AP001527.1-201ENST00000566440 CWC22Q9HCG8 908 aaKnown RBP12.54□□□□□ -0.4
AP001527.1-201ENST00000566440 USP35Q9P2H5 1018 aa12.54□□□□□ -0.4
AP001527.1-201ENST00000566440 ANO8Q9HCE9 1232 aaPredicted RBP12.53□□□□□ -0.4
AP001527.1-201ENST00000566440 NEUROD2Q15784 382 aa12.52□□□□□ -0.4
AP001527.1-201ENST00000566440 SCRIBQ14160 1630 aa12.52□□□□□ -0.4
AP001527.1-201ENST00000566440 CERS3Q8IU89 383 aa12.52□□□□□ -0.41
AP001527.1-201ENST00000566440 TRIM41Q8WV44 630 aa12.52□□□□□ -0.41
AP001527.1-201ENST00000566440 TMED8Q6PL24 325 aaPredicted RBP12.49□□□□□ -0.41
AP001527.1-201ENST00000566440 AAMPQ13685 434 aa12.49□□□□□ -0.41
AP001527.1-201ENST00000566440 IFNLR1Q8IU57 520 aaPredicted RBP12.45□□□□□ -0.42
AP001527.1-201ENST00000566440 APBB1O00213 710 aa12.45□□□□□ -0.42
AP001527.1-201ENST00000566440 SCAF1Q9H7N4 1312 aaKnown RBP12.44□□□□□ -0.42
AP001527.1-201ENST00000566440 ARID4BQ4LE39 1312 aaPredicted RBP12.43□□□□□ -0.42
AP001527.1-201ENST00000566440 CC2D2BQ6DHV5 1058 aa12.43□□□□□ -0.42
AP001527.1-201ENST00000566440 PPM1GO15355 546 aaPredicted RBP12.42□□□□□ -0.42
AP001527.1-201ENST00000566440 FOXD1Q16676 465 aa12.41□□□□□ -0.42
AP001527.1-201ENST00000566440 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
AP001527.1-201ENST00000566440 TMCO4Q5TGY1 634 aa12.38□□□□□ -0.43
AP001527.1-201ENST00000566440 NACADO15069 1562 aa12.38□□□□□ -0.43
AP001527.1-201ENST00000566440 MFAP1P55081 439 aaKnown RBP12.38□□□□□ -0.43
AP001527.1-201ENST00000566440 AEBP1Q8IUX7 1158 aa12.37□□□□□ -0.43
AP001527.1-201ENST00000566440 E9PSI1 815 aa12.36□□□□□ -0.43
AP001527.1-201ENST00000566440 PRDM16Q9HAZ2 1276 aa12.36□□□□□ -0.43
AP001527.1-201ENST00000566440 NCLP19338 710 aaKnown RBP12.35□□□□□ -0.43
AP001527.1-201ENST00000566440 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
AP001527.1-201ENST00000566440 ZNF526Q8TF50 670 aaPredicted RBP12.33□□□□□ -0.44
AP001527.1-201ENST00000566440 ACIN1Q9UKV3 1341 aaKnown RBP12.32□□□□□ -0.44
AP001527.1-201ENST00000566440 EIF4G1Q04637 1599 aaKnown RBP12.32□□□□□ -0.44
AP001527.1-201ENST00000566440 PIAS4Q8N2W9 510 aaPredicted RBP12.32□□□□□ -0.44
AP001527.1-201ENST00000566440 LMOD2Q6P5Q4 547 aa12.3□□□□□ -0.44
AP001527.1-201ENST00000566440 ECM2O94769 699 aaPredicted RBP12.29□□□□□ -0.44
AP001527.1-201ENST00000566440 WRNQ14191 1432 aaPredicted RBP eCLIP12.28□□□□□ -0.44
AP001527.1-201ENST00000566440 CCDC27Q2M243 656 aa12.28□□□□□ -0.44
AP001527.1-201ENST00000566440 TEX2Q8IWB9 1127 aa12.28□□□□□ -0.44
AP001527.1-201ENST00000566440 PRDM10Q9NQV6 1147 aa12.28□□□□□ -0.44
AP001527.1-201ENST00000566440 TRAIPQ9BWF2 469 aa12.27□□□□□ -0.44
AP001527.1-201ENST00000566440 WIZO95785 1651 aa12.26□□□□□ -0.45
AP001527.1-201ENST00000566440 MROH2BQ7Z745 1585 aa12.26□□□□□ -0.45
AP001527.1-201ENST00000566440 CCER1Q8TC90 406 aaPredicted RBP12.25□□□□□ -0.45
AP001527.1-201ENST00000566440 CLSPNQ9HAW4 1339 aa12.25□□□□□ -0.45
AP001527.1-201ENST00000566440 CCDC82Q8N4S0 544 aa12.25□□□□□ -0.45
AP001527.1-201ENST00000566440 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
AP001527.1-201ENST00000566440 GZF1Q9H116 711 aaPredicted RBP12.23□□□□□ -0.45
AP001527.1-201ENST00000566440 RBM10P98175 930 aaKnown RBP12.22□□□□□ -0.45
AP001527.1-201ENST00000566440 PLCD4Q9BRC7 762 aa12.22□□□□□ -0.45
AP001527.1-201ENST00000566440 RGL2O15211 777 aa12.21□□□□□ -0.46
AP001527.1-201ENST00000566440 KDM4AO75164 1064 aa12.2□□□□□ -0.46
AP001527.1-201ENST00000566440 CCDC125Q86Z20 511 aa12.19□□□□□ -0.46
AP001527.1-201ENST00000566440 DIEXFQ68CQ4 756 aaKnown RBP12.19□□□□□ -0.46
AP001527.1-201ENST00000566440 CNPY4Q8N129 248 aa12.19□□□□□ -0.46
AP001527.1-201ENST00000566440 EEA1Q15075 1411 aa12.19□□□□□ -0.46
AP001527.1-201ENST00000566440 CECR2Q9BXF3 1484 aa12.19□□□□□ -0.46
AP001527.1-201ENST00000566440 SLC24A3Q9HC58 644 aa12.18□□□□□ -0.46
AP001527.1-201ENST00000566440 SETQ01105 290 aaPredicted RBP12.18□□□□□ -0.46
AP001527.1-201ENST00000566440 ANP32EQ9BTT0 268 aa12.18□□□□□ -0.46
AP001527.1-201ENST00000566440 TOP2AP11388 1531 aaKnown RBP12.17□□□□□ -0.46
AP001527.1-201ENST00000566440 NEUROD1Q13562 356 aa12.16□□□□□ -0.46
AP001527.1-201ENST00000566440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.14□□□□□ -0.47
AP001527.1-201ENST00000566440 PTMSP20962 102 aa12.14□□□□□ -0.47
AP001527.1-201ENST00000566440 ZNF316A6NFI3 1004 aaPredicted RBP12.13□□□□□ -0.47
AP001527.1-201ENST00000566440 CHGAP10645 457 aaKnown RBP12.13□□□□□ -0.47
AP001527.1-201ENST00000566440 TNIKQ9UKE5 1360 aa12.12□□□□□ -0.47
AP001527.1-201ENST00000566440 CEP162Q5TB80 1403 aa12.11□□□□□ -0.47
AP001527.1-201ENST00000566440 ANAPC15P60006 121 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms