RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TSPYL2Q9H2G4 693 aaPredicted RBP9.79□□□□□ -0.84
LINC00561-201ENST00000565815 PRKAR2AP13861 404 aaKnown RBP9.78□□□□□ -0.84
LINC00561-201ENST00000565815 FAM212AQ96EL1 285 aa9.77□□□□□ -0.85
LINC00561-201ENST00000565815 NKX1-1Q15270 411 aaPredicted RBP9.76□□□□□ -0.85
LINC00561-201ENST00000565815 FARP1Q9Y4F1 1045 aaPredicted RBP9.76□□□□□ -0.85
LINC00561-201ENST00000565815 KDM2AQ9Y2K7 1162 aa9.74□□□□□ -0.85
LINC00561-201ENST00000565815 GSE1Q14687 1217 aa9.74□□□□□ -0.85
LINC00561-201ENST00000565815 BBXQ8WY36 941 aaPredicted RBP9.74□□□□□ -0.85
LINC00561-201ENST00000565815 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
LINC00561-201ENST00000565815 PIP4P2Q8N4L2 257 aa9.72□□□□□ -0.85
LINC00561-201ENST00000565815 TSHZ2Q9NRE2 1034 aa9.71□□□□□ -0.85
LINC00561-201ENST00000565815 FXR2P51116 673 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINC00561-201ENST00000565815 RIOK3O14730 519 aaKnown RBP9.7□□□□□ -0.86
LINC00561-201ENST00000565815 STK25O00506 426 aa9.69□□□□□ -0.86
LINC00561-201ENST00000565815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.68□□□□□ -0.86
LINC00561-201ENST00000565815 ZFP91Q96JP5 570 aaPredicted RBP9.68□□□□□ -0.86
LINC00561-201ENST00000565815 HS6ST3Q8IZP7 471 aa9.68□□□□□ -0.86
LINC00561-201ENST00000565815 PCDHB8Q9UN66 801 aa9.68□□□□□ -0.86
LINC00561-201ENST00000565815 PCDHB13Q9Y5F0 798 aa9.68□□□□□ -0.86
LINC00561-201ENST00000565815 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.67□□□□□ -0.86
LINC00561-201ENST00000565815 BCL11BQ9C0K0 894 aaPredicted RBP9.65□□□□□ -0.86
LINC00561-201ENST00000565815 CCDC61Q9Y6R9 512 aa9.65□□□□□ -0.86
LINC00561-201ENST00000565815 SPRYD3Q8NCJ5 442 aa9.63□□□□□ -0.87
LINC00561-201ENST00000565815 STK24Q9Y6E0 443 aa9.62□□□□□ -0.87
LINC00561-201ENST00000565815 TRIM41Q8WV44 630 aa9.62□□□□□ -0.87
LINC00561-201ENST00000565815 GTPBP6O43824 516 aaPredicted RBP9.58□□□□□ -0.88
LINC00561-201ENST00000565815 VGFO15240 615 aaPredicted RBP9.57□□□□□ -0.88
LINC00561-201ENST00000565815 MAP3K13O43283 966 aa9.57□□□□□ -0.88
LINC00561-201ENST00000565815 CHRM1P11229 460 aaPredicted RBP9.57□□□□□ -0.88
LINC00561-201ENST00000565815 IFNL1Q8IU54 200 aa9.57□□□□□ -0.88
LINC00561-201ENST00000565815 PHF12Q96QT6 1004 aa9.56□□□□□ -0.88
LINC00561-201ENST00000565815 TRPC6Q9Y210 931 aa9.54□□□□□ -0.88
LINC00561-201ENST00000565815 CD44P16070 742 aaKnown RBP9.51□□□□□ -0.89
LINC00561-201ENST00000565815 VSIG10Q8N0Z9 540 aa9.5□□□□□ -0.89
LINC00561-201ENST00000565815 ZRANB1Q9UGI0 708 aa9.5□□□□□ -0.89
LINC00561-201ENST00000565815 KIF12Q96FN5 646 aa9.49□□□□□ -0.89
LINC00561-201ENST00000565815 PRKCSHP14314 528 aaPredicted RBP9.48□□□□□ -0.89
LINC00561-201ENST00000565815 DNAJC5Q9H3Z4 198 aa9.47□□□□□ -0.89
LINC00561-201ENST00000565815 EVX2Q03828 476 aa9.47□□□□□ -0.89
LINC00561-201ENST00000565815 PSEN1P49768 467 aa9.46□□□□□ -0.89
LINC00561-201ENST00000565815 CADPS2Q86UW7 1296 aa9.46□□□□□ -0.9
LINC00561-201ENST00000565815 MFRPQ9BY79 579 aa9.45□□□□□ -0.9
LINC00561-201ENST00000565815 ZNF467Q7Z7K2 595 aaPredicted RBP9.44□□□□□ -0.9
LINC00561-201ENST00000565815 PDAP1Q13442 181 aaKnown RBP9.44□□□□□ -0.9
LINC00561-201ENST00000565815 PPP1R37O75864 691 aa9.43□□□□□ -0.9
LINC00561-201ENST00000565815 CABP2Q9NPB3 220 aa9.43□□□□□ -0.9
LINC00561-201ENST00000565815 SGIP1Q9BQI5 828 aa9.43□□□□□ -0.9
LINC00561-201ENST00000565815 EFCAB3Q8N7B9 438 aa9.42□□□□□ -0.9
LINC00561-201ENST00000565815 MS4A3Q96HJ5 214 aa9.41□□□□□ -0.9
LINC00561-201ENST00000565815 ZNF579Q8NAF0 562 aaKnown RBP9.4□□□□□ -0.9
LINC00561-201ENST00000565815 PAK3O75914 559 aaPredicted RBP9.4□□□□□ -0.91
LINC00561-201ENST00000565815 PHF8Q9UPP1 1060 aa9.39□□□□□ -0.91
LINC00561-201ENST00000565815 TAOK2Q9UL54 1235 aa9.38□□□□□ -0.91
LINC00561-201ENST00000565815 C19orf67A6NJJ6 358 aa9.35□□□□□ -0.91
LINC00561-201ENST00000565815 NISCHQ9Y2I1 1504 aa9.35□□□□□ -0.91
LINC00561-201ENST00000565815 GALR2O43603 387 aaPredicted RBP9.35□□□□□ -0.91
LINC00561-201ENST00000565815 BCANQ96GW7 911 aa9.34□□□□□ -0.91
LINC00561-201ENST00000565815 FBXO22Q8NEZ5 403 aa9.33□□□□□ -0.92
LINC00561-201ENST00000565815 MS4A4AQ96JQ5 239 aa9.33□□□□□ -0.92
LINC00561-201ENST00000565815 TMEM106CQ9BVX2 250 aa9.31□□□□□ -0.92
LINC00561-201ENST00000565815 HAX1O00165 279 aa9.29□□□□□ -0.92
LINC00561-201ENST00000565815 TTLL13PA6NNM8 815 aa9.26□□□□□ -0.93
LINC00561-201ENST00000565815 TPRNQ4KMQ1 711 aa9.25□□□□□ -0.93
LINC00561-201ENST00000565815 BMP2KQ9NSY1 1161 aaPredicted RBP9.25□□□□□ -0.93
LINC00561-201ENST00000565815 KCNV2Q8TDN2 545 aa9.24□□□□□ -0.93
LINC00561-201ENST00000565815 DPY19L2Q6NUT2 758 aa9.24□□□□□ -0.93
LINC00561-201ENST00000565815 NCKAP5LQ9HCH0 1330 aa9.22□□□□□ -0.93
LINC00561-201ENST00000565815 TRIM35Q9UPQ4 493 aa9.21□□□□□ -0.93
LINC00561-201ENST00000565815 ATN1P54259 1190 aaPredicted RBP9.18□□□□□ -0.94
LINC00561-201ENST00000565815 NLRP6P59044 892 aa9.18□□□□□ -0.94
LINC00561-201ENST00000565815 RYDENQ9NUL5 291 aaKnown RBP9.17□□□□□ -0.94
LINC00561-201ENST00000565815 GOLGA2Q08379 1002 aa9.16□□□□□ -0.94
LINC00561-201ENST00000565815 SOX12O15370 315 aa9.16□□□□□ -0.94
LINC00561-201ENST00000565815 NBR1Q14596 966 aa9.16□□□□□ -0.94
LINC00561-201ENST00000565815 MKRN3Q13064 507 aaKnown RBP9.13□□□□□ -0.95
LINC00561-201ENST00000565815 PELP1Q8IZL8 1130 aaKnown RBP9.13□□□□□ -0.95
LINC00561-201ENST00000565815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.13□□□□□ -0.95
LINC00561-201ENST00000565815 TIE1P35590 1138 aa9.12□□□□□ -0.95
LINC00561-201ENST00000565815 PDCD7Q8N8D1 485 aaKnown RBP9.11□□□□□ -0.95
LINC00561-201ENST00000565815 LARP6Q9BRS8 491 aaKnown RBP9.11□□□□□ -0.95
LINC00561-201ENST00000565815 ATMINO43313 823 aaPredicted RBP9.09□□□□□ -0.95
LINC00561-201ENST00000565815 GABBR2O75899 941 aa9.09□□□□□ -0.95
LINC00561-201ENST00000565815 ILDR1Q86SU0 546 aaPredicted RBP9.08□□□□□ -0.96
LINC00561-201ENST00000565815 WDR70Q9NW82 654 aa9.07□□□□□ -0.96
LINC00561-201ENST00000565815 POTEHQ6S545 545 aa9.07□□□□□ -0.96
LINC00561-201ENST00000565815 SEMA3EO15041 775 aa9.06□□□□□ -0.96
LINC00561-201ENST00000565815 CRISPLD2Q9H0B8 497 aa9.06□□□□□ -0.96
LINC00561-201ENST00000565815 COLQQ9Y215 455 aaPredicted RBP9.06□□□□□ -0.96
LINC00561-201ENST00000565815 ASTLQ6HA08 431 aaPredicted RBP9.04□□□□□ -0.96
LINC00561-201ENST00000565815 IRX5P78411 483 aaPredicted RBP9.04□□□□□ -0.96
LINC00561-201ENST00000565815 POTEFA5A3E0 1075 aa9.03□□□□□ -0.96
LINC00561-201ENST00000565815 MICALL2Q8IY33 904 aa9.03□□□□□ -0.96
LINC00561-201ENST00000565815 POTEIP0CG38 1075 aa9.03□□□□□ -0.96
LINC00561-201ENST00000565815 E2F4Q16254 413 aa9.03□□□□□ -0.96
LINC00561-201ENST00000565815 DDX27Q96GQ7 796 aaKnown RBP9.01□□□□□ -0.97
LINC00561-201ENST00000565815 TMEM92Q6UXU6 159 aa9.01□□□□□ -0.97
LINC00561-201ENST00000565815 DSG2Q14126 1118 aa9□□□□□ -0.97
LINC00561-201ENST00000565815 P3H3Q8IVL6 736 aa8.99□□□□□ -0.97
LINC00561-201ENST00000565815 EMILIN3Q9NT22 766 aa8.98□□□□□ -0.97
LINC00561-201ENST00000565815 MFSD10Q14728 455 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms