RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 SHROOM4Q9ULL8 1493 aa8.61□□□□□ -1.03
PTPN9-204ENST00000564970 CENPJQ9HC77 1338 aaPredicted RBP8.6□□□□□ -1.03
PTPN9-204ENST00000564970 RBM10P98175 930 aaKnown RBP8.58□□□□□ -1.04
PTPN9-204ENST00000564970 RSPH4AQ5TD94 716 aa8.58□□□□□ -1.04
PTPN9-204ENST00000564970 IL27Q8NEV9 243 aa8.58□□□□□ -1.04
PTPN9-204ENST00000564970 BRD2P25440 801 aaKnown RBP8.57□□□□□ -1.04
PTPN9-204ENST00000564970 FKBP8Q14318 412 aa8.57□□□□□ -1.04
PTPN9-204ENST00000564970 ILDR1Q86SU0 546 aaPredicted RBP8.57□□□□□ -1.04
PTPN9-204ENST00000564970 KLHL34Q8N239 644 aa8.57□□□□□ -1.04
PTPN9-204ENST00000564970 WRNQ14191 1432 aaPredicted RBP eCLIP8.56□□□□□ -1.04
PTPN9-204ENST00000564970 PPM1GO15355 546 aaPredicted RBP8.56□□□□□ -1.04
PTPN9-204ENST00000564970 CALD1Q05682 793 aaKnown RBP8.54□□□□□ -1.04
PTPN9-204ENST00000564970 HSP90AA2PQ14568 343 aaPredicted RBP8.54□□□□□ -1.04
PTPN9-204ENST00000564970 ANP32AP39687 249 aaKnown RBP8.53□□□□□ -1.04
PTPN9-204ENST00000564970 DCAF8L2P0C7V8 631 aa8.52□□□□□ -1.05
PTPN9-204ENST00000564970 EEA1Q15075 1411 aa8.5□□□□□ -1.05
PTPN9-204ENST00000564970 IPO9Q96P70 1041 aaKnown RBP8.5□□□□□ -1.05
PTPN9-204ENST00000564970 BCL11BQ9C0K0 894 aaPredicted RBP8.49□□□□□ -1.05
PTPN9-204ENST00000564970 HSP90AA1P07900 732 aaKnown RBP8.48□□□□□ -1.05
PTPN9-204ENST00000564970 BCCIPQ9P287 314 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTPN9-204ENST00000564970 ZBTB47Q9UFB7 747 aaPredicted RBP8.48□□□□□ -1.05
PTPN9-204ENST00000564970 ERCC6Q03468 1493 aa8.48□□□□□ -1.05
PTPN9-204ENST00000564970 CCER2I3L3R5 266 aa8.47□□□□□ -1.05
PTPN9-204ENST00000564970 NEFMP07197 916 aa8.47□□□□□ -1.05
PTPN9-204ENST00000564970 FBXO3Q9UK99 471 aa8.47□□□□□ -1.05
PTPN9-204ENST00000564970 VGFO15240 615 aaPredicted RBP8.46□□□□□ -1.06
PTPN9-204ENST00000564970 NAP1L5Q96NT1 182 aaPredicted RBP8.46□□□□□ -1.06
PTPN9-204ENST00000564970 PPP4R2Q9NY27 417 aa8.46□□□□□ -1.06
PTPN9-204ENST00000564970 ARID4BQ4LE39 1312 aaPredicted RBP8.46□□□□□ -1.06
PTPN9-204ENST00000564970 IPO4Q8TEX9 1081 aaKnown RBP8.45□□□□□ -1.06
PTPN9-204ENST00000564970 MAP7D2Q96T17 732 aa8.45□□□□□ -1.06
PTPN9-204ENST00000564970 A0A0U1RQG5 324 aaPredicted RBP8.44□□□□□ -1.06
PTPN9-204ENST00000564970 NBR1Q14596 966 aa8.44□□□□□ -1.06
PTPN9-204ENST00000564970 CNGB1Q14028 1251 aaPredicted RBP8.43□□□□□ -1.06
PTPN9-204ENST00000564970 GSE1Q14687 1217 aa8.43□□□□□ -1.06
PTPN9-204ENST00000564970 ARID3AQ99856 593 aa8.43□□□□□ -1.06
PTPN9-204ENST00000564970 PDCL3Q9H2J4 239 aa8.43□□□□□ -1.06
PTPN9-204ENST00000564970 RTN4Q9NQC3 1192 aaKnown RBP8.43□□□□□ -1.06
PTPN9-204ENST00000564970 TIMELESSQ9UNS1 1208 aa8.43□□□□□ -1.06
PTPN9-204ENST00000564970 HSP90B1P14625 803 aaKnown RBP8.42□□□□□ -1.06
PTPN9-204ENST00000564970 PPP6R1Q9UPN7 881 aa8.42□□□□□ -1.06
PTPN9-204ENST00000564970 ANP32BQ92688 251 aaKnown RBP8.41□□□□□ -1.06
PTPN9-204ENST00000564970 BCANQ96GW7 911 aa8.41□□□□□ -1.06
PTPN9-204ENST00000564970 TPM2P07951 284 aa8.4□□□□□ -1.06
PTPN9-204ENST00000564970 AMER1Q5JTC6 1135 aaPredicted RBP8.4□□□□□ -1.06
PTPN9-204ENST00000564970 CANXP27824 592 aaKnown RBP8.39□□□□□ -1.07
PTPN9-204ENST00000564970 MTERF4Q7Z6M4 381 aaKnown RBP8.39□□□□□ -1.07
PTPN9-204ENST00000564970 NPM2Q86SE8 214 aaKnown RBP8.38□□□□□ -1.07
PTPN9-204ENST00000564970 NAP1L2Q9ULW6 460 aaPredicted RBP8.38□□□□□ -1.07
PTPN9-204ENST00000564970 TAF3Q5VWG9 929 aa8.37□□□□□ -1.07
PTPN9-204ENST00000564970 TEX2Q8IWB9 1127 aa8.37□□□□□ -1.07
PTPN9-204ENST00000564970 ADRA2BP18089 450 aa8.36□□□□□ -1.07
PTPN9-204ENST00000564970 L1TD1Q5T7N2 865 aaKnown RBP8.36□□□□□ -1.07
PTPN9-204ENST00000564970 DDRGK1Q96HY6 314 aa8.36□□□□□ -1.07
PTPN9-204ENST00000564970 ZCCHC6Q5VYS8 1495 aaKnown RBP8.35□□□□□ -1.07
PTPN9-204ENST00000564970 SMAP1Q8IYB5 467 aaPredicted RBP8.35□□□□□ -1.07
PTPN9-204ENST00000564970 RNF39Q9H2S5 420 aa8.35□□□□□ -1.07
PTPN9-204ENST00000564970 PRDM4Q9UKN5 801 aa8.35□□□□□ -1.07
PTPN9-204ENST00000564970 HMGB1P09429 215 aaKnown RBP8.34□□□□□ -1.07
PTPN9-204ENST00000564970 CLCN1P35523 988 aa8.34□□□□□ -1.07
PTPN9-204ENST00000564970 UTP14CQ5TAP6 766 aaKnown RBP8.34□□□□□ -1.07
PTPN9-204ENST00000564970 CNKSR2Q8WXI2 1034 aa8.34□□□□□ -1.07
PTPN9-204ENST00000564970 PNNQ9H307 717 aaKnown RBP8.34□□□□□ -1.07
PTPN9-204ENST00000564970 THOC2Q8NI27 1593 aaKnown RBP8.34□□□□□ -1.07
PTPN9-204ENST00000564970 CHRM1P11229 460 aaPredicted RBP8.33□□□□□ -1.08
PTPN9-204ENST00000564970 TERF1P54274 439 aa8.33□□□□□ -1.08
PTPN9-204ENST00000564970 PAK3O75914 559 aaPredicted RBP8.32□□□□□ -1.08
PTPN9-204ENST00000564970 FTSJ3Q8IY81 847 aaKnown RBP8.32□□□□□ -1.08
PTPN9-204ENST00000564970 BBXQ8WY36 941 aaPredicted RBP8.32□□□□□ -1.08
PTPN9-204ENST00000564970 BRPF3Q9ULD4 1205 aa8.32□□□□□ -1.08
PTPN9-204ENST00000564970 DMRT2Q9Y5R5 561 aa8.32□□□□□ -1.08
PTPN9-204ENST00000564970 TULP1O00294 542 aaPredicted RBP8.31□□□□□ -1.08
PTPN9-204ENST00000564970 TNNT2P45379 298 aaPredicted RBP8.31□□□□□ -1.08
PTPN9-204ENST00000564970 PTMSP20962 102 aa8.29□□□□□ -1.08
PTPN9-204ENST00000564970 CDK11BP21127 795 aaKnown RBP8.29□□□□□ -1.08
PTPN9-204ENST00000564970 ITGAEP38570 1179 aa8.29□□□□□ -1.08
PTPN9-204ENST00000564970 CHMP4AQ9BY43 222 aa8.29□□□□□ -1.08
PTPN9-204ENST00000564970 RIMBP3CA6NJZ7 1639 aa8.28□□□□□ -1.08
PTPN9-204ENST00000564970 RIMBP3BA6NNM3 1639 aa8.28□□□□□ -1.08
PTPN9-204ENST00000564970 RIMBP3Q9UFD9 1639 aa8.28□□□□□ -1.08
PTPN9-204ENST00000564970 GOLGA6L3A6NEY3 463 aa8.27□□□□□ -1.09
PTPN9-204ENST00000564970 KIF20AO95235 890 aa8.27□□□□□ -1.09
PTPN9-204ENST00000564970 TRIM44Q96DX7 344 aaPredicted RBP8.27□□□□□ -1.09
PTPN9-204ENST00000564970 LAS1LQ9Y4W2 734 aaKnown RBP8.27□□□□□ -1.09
PTPN9-204ENST00000564970 MS4A1P11836 297 aa8.26□□□□□ -1.09
PTPN9-204ENST00000564970 GTF2E1P29083 439 aaPredicted RBP8.26□□□□□ -1.09
PTPN9-204ENST00000564970 OSCARQ8IYS5 282 aa8.26□□□□□ -1.09
PTPN9-204ENST00000564970 ISY1Q9ULR0 285 aaKnown RBP8.26□□□□□ -1.09
PTPN9-204ENST00000564970 NCAPD3P42695 1498 aa8.26□□□□□ -1.09
PTPN9-204ENST00000564970 STAC3Q96MF2 364 aa8.25□□□□□ -1.09
PTPN9-204ENST00000564970 C1QBPQ07021 282 aaKnown RBP8.24□□□□□ -1.09
PTPN9-204ENST00000564970 AXDND1Q5T1B0 1012 aaPredicted RBP8.24□□□□□ -1.09
PTPN9-204ENST00000564970 BAZ1AQ9NRL2 1556 aaPredicted RBP8.23□□□□□ -1.09
PTPN9-204ENST00000564970 TCERG1O14776 1098 aaKnown RBP8.23□□□□□ -1.09
PTPN9-204ENST00000564970 CLGNO14967 610 aa8.23□□□□□ -1.09
PTPN9-204ENST00000564970 TRHP20396 242 aaPredicted RBP8.23□□□□□ -1.09
PTPN9-204ENST00000564970 PAXIP1Q6ZW49 1069 aaPredicted RBP8.23□□□□□ -1.09
PTPN9-204ENST00000564970 NESP48681 1621 aa8.22□□□□□ -1.09
PTPN9-204ENST00000564970 SLC20A2Q08357 652 aa8.22□□□□□ -1.09
PTPN9-204ENST00000564970 ANP32CO43423 234 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms