RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 BCCIPQ9P287 314 aaKnown RBP eCLIP8.43□□□□□ -1.06
TUBGCP4-207ENST00000563963 EIF4G1Q04637 1599 aaKnown RBP8.42□□□□□ -1.06
TUBGCP4-207ENST00000563963 PLCB2Q00722 1185 aa8.41□□□□□ -1.06
TUBGCP4-207ENST00000563963 PAXIP1Q6ZW49 1069 aaPredicted RBP8.41□□□□□ -1.06
TUBGCP4-207ENST00000563963 RBM10P98175 930 aaKnown RBP8.41□□□□□ -1.06
TUBGCP4-207ENST00000563963 PABPN1Q86U42 306 aaKnown RBP eCLIP8.41□□□□□ -1.06
TUBGCP4-207ENST00000563963 LMTK3Q96Q04 1460 aa8.4□□□□□ -1.06
TUBGCP4-207ENST00000563963 RSPH4AQ5TD94 716 aa8.39□□□□□ -1.07
TUBGCP4-207ENST00000563963 CUX2O14529 1486 aa8.39□□□□□ -1.07
TUBGCP4-207ENST00000563963 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
TUBGCP4-207ENST00000563963 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.37□□□□□ -1.07
TUBGCP4-207ENST00000563963 ZMYND15Q9H091 742 aa8.37□□□□□ -1.07
TUBGCP4-207ENST00000563963 PCGF6Q9BYE7 350 aa8.37□□□□□ -1.07
TUBGCP4-207ENST00000563963 CCDC9Q9Y3X0 531 aaKnown RBP8.36□□□□□ -1.07
TUBGCP4-207ENST00000563963 VSIG10Q8N0Z9 540 aa8.36□□□□□ -1.07
TUBGCP4-207ENST00000563963 ADRA2BP18089 450 aa8.33□□□□□ -1.08
TUBGCP4-207ENST00000563963 CCER1Q8TC90 406 aaPredicted RBP8.3□□□□□ -1.08
TUBGCP4-207ENST00000563963 RTL5Q5HYW3 569 aaPredicted RBP8.29□□□□□ -1.08
TUBGCP4-207ENST00000563963 UBTFP17480 764 aaKnown RBP8.29□□□□□ -1.08
TUBGCP4-207ENST00000563963 SCRIBQ14160 1630 aa8.27□□□□□ -1.09
TUBGCP4-207ENST00000563963 NCLP19338 710 aaKnown RBP8.27□□□□□ -1.09
TUBGCP4-207ENST00000563963 IRX6P78412 446 aaPredicted RBP8.24□□□□□ -1.09
TUBGCP4-207ENST00000563963 NAP1L2Q9ULW6 460 aaPredicted RBP8.24□□□□□ -1.09
TUBGCP4-207ENST00000563963 DISP3Q9P2K9 1392 aa8.23□□□□□ -1.09
TUBGCP4-207ENST00000563963 PTMSP20962 102 aa8.22□□□□□ -1.09
TUBGCP4-207ENST00000563963 TSHZ2Q9NRE2 1034 aa8.21□□□□□ -1.1
TUBGCP4-207ENST00000563963 CFAP44Q96MT7 982 aa8.21□□□□□ -1.1
TUBGCP4-207ENST00000563963 HMGXB3Q12766 1538 aa8.21□□□□□ -1.1
TUBGCP4-207ENST00000563963 SMARCA2P51531 1590 aa8.2□□□□□ -1.1
TUBGCP4-207ENST00000563963 ZBTB22O15209 634 aa8.2□□□□□ -1.1
TUBGCP4-207ENST00000563963 CLSTN1O94985 981 aa8.19□□□□□ -1.1
TUBGCP4-207ENST00000563963 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.19□□□□□ -1.1
TUBGCP4-207ENST00000563963 CNGB1Q14028 1251 aaPredicted RBP8.18□□□□□ -1.1
TUBGCP4-207ENST00000563963 NCAPD3P42695 1498 aa8.17□□□□□ -1.1
TUBGCP4-207ENST00000563963 TICAM2Q86XR7 235 aa8.17□□□□□ -1.1
TUBGCP4-207ENST00000563963 IGSF3O75054 1194 aa8.17□□□□□ -1.1
TUBGCP4-207ENST00000563963 IPO4Q8TEX9 1081 aaKnown RBP8.16□□□□□ -1.1
TUBGCP4-207ENST00000563963 PSMD1Q99460 953 aa8.15□□□□□ -1.1
TUBGCP4-207ENST00000563963 CANXP27824 592 aaKnown RBP8.15□□□□□ -1.11
TUBGCP4-207ENST00000563963 FBXO41Q8TF61 875 aa8.14□□□□□ -1.11
TUBGCP4-207ENST00000563963 PUS7Q96PZ0 661 aaKnown RBP8.14□□□□□ -1.11
TUBGCP4-207ENST00000563963 BBXQ8WY36 941 aaPredicted RBP8.13□□□□□ -1.11
TUBGCP4-207ENST00000563963 TEX2Q8IWB9 1127 aa8.13□□□□□ -1.11
TUBGCP4-207ENST00000563963 PPP6R1Q9UPN7 881 aa8.13□□□□□ -1.11
TUBGCP4-207ENST00000563963 PTMAP06454 111 aaKnown RBP8.12□□□□□ -1.11
TUBGCP4-207ENST00000563963 ZNF592Q92610 1267 aa8.12□□□□□ -1.11
TUBGCP4-207ENST00000563963 ZFP91Q96JP5 570 aaPredicted RBP8.12□□□□□ -1.11
TUBGCP4-207ENST00000563963 ERCC6Q03468 1493 aa8.12□□□□□ -1.11
TUBGCP4-207ENST00000563963 PLCD4Q9BRC7 762 aa8.11□□□□□ -1.11
TUBGCP4-207ENST00000563963 ARID3AQ99856 593 aa8.11□□□□□ -1.11
TUBGCP4-207ENST00000563963 LAMC3Q9Y6N6 1575 aa8.11□□□□□ -1.11
TUBGCP4-207ENST00000563963 CNPY4Q8N129 248 aa8.1□□□□□ -1.11
TUBGCP4-207ENST00000563963 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.1□□□□□ -1.11
TUBGCP4-207ENST00000563963 CHMP4BQ9H444 224 aaKnown RBP8.1□□□□□ -1.11
TUBGCP4-207ENST00000563963 FTSJ3Q8IY81 847 aaKnown RBP8.1□□□□□ -1.11
TUBGCP4-207ENST00000563963 ARID4BQ4LE39 1312 aaPredicted RBP8.09□□□□□ -1.11
TUBGCP4-207ENST00000563963 PEG3Q9GZU2 1588 aa8.08□□□□□ -1.12
TUBGCP4-207ENST00000563963 SLC4A1APQ9BWU0 796 aaKnown RBP8.08□□□□□ -1.12
TUBGCP4-207ENST00000563963 NEFMP07197 916 aa8.08□□□□□ -1.12
TUBGCP4-207ENST00000563963 WWC1Q8IX03 1113 aa8.08□□□□□ -1.12
TUBGCP4-207ENST00000563963 PRDM10Q9NQV6 1147 aa8.08□□□□□ -1.12
TUBGCP4-207ENST00000563963 ZNF526Q8TF50 670 aaPredicted RBP8.06□□□□□ -1.12
TUBGCP4-207ENST00000563963 BRPF3Q9ULD4 1205 aa8.05□□□□□ -1.12
TUBGCP4-207ENST00000563963 ZBTB7CA1YPR0 619 aa8.05□□□□□ -1.12
TUBGCP4-207ENST00000563963 HSP90AA2PQ14568 343 aaPredicted RBP8.04□□□□□ -1.12
TUBGCP4-207ENST00000563963 BAZ1AQ9NRL2 1556 aaPredicted RBP8.04□□□□□ -1.12
TUBGCP4-207ENST00000563963 SECISBP2LQ93073 1101 aaKnown RBP8.04□□□□□ -1.12
TUBGCP4-207ENST00000563963 SMARCA4P51532 1647 aa8.03□□□□□ -1.12
TUBGCP4-207ENST00000563963 DIEXFQ68CQ4 756 aaKnown RBP8.03□□□□□ -1.12
TUBGCP4-207ENST00000563963 THOC2Q8NI27 1593 aaKnown RBP8.02□□□□□ -1.12
TUBGCP4-207ENST00000563963 RRP9O43818 475 aaKnown RBP8.02□□□□□ -1.13
TUBGCP4-207ENST00000563963 ATAD2BQ9ULI0 1458 aa8.02□□□□□ -1.13
TUBGCP4-207ENST00000563963 PATL2C9JE40 543 aaKnown RBP8.01□□□□□ -1.13
TUBGCP4-207ENST00000563963 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
TUBGCP4-207ENST00000563963 PDS5BQ9NTI5 1447 aa8.01□□□□□ -1.13
TUBGCP4-207ENST00000563963 NPM1P06748 294 aaKnown RBP eCLIP8.01□□□□□ -1.13
TUBGCP4-207ENST00000563963 SETQ01105 290 aaPredicted RBP8□□□□□ -1.13
TUBGCP4-207ENST00000563963 ANP32BQ92688 251 aaKnown RBP7.99□□□□□ -1.13
TUBGCP4-207ENST00000563963 FAM193AP78312 1265 aa7.99□□□□□ -1.13
TUBGCP4-207ENST00000563963 MCCP23508 829 aa7.99□□□□□ -1.13
TUBGCP4-207ENST00000563963 RBM19Q9Y4C8 960 aaKnown RBP7.99□□□□□ -1.13
TUBGCP4-207ENST00000563963 CLGNO14967 610 aa7.98□□□□□ -1.13
TUBGCP4-207ENST00000563963 BAZ1BQ9UIG0 1483 aaKnown RBP7.98□□□□□ -1.13
TUBGCP4-207ENST00000563963 SUPT16HQ9Y5B9 1047 aaKnown RBP7.97□□□□□ -1.13
TUBGCP4-207ENST00000563963 APPP05067 770 aa7.96□□□□□ -1.14
TUBGCP4-207ENST00000563963 CHRM1P11229 460 aaPredicted RBP7.96□□□□□ -1.14
TUBGCP4-207ENST00000563963 ZNF316A6NFI3 1004 aaPredicted RBP7.94□□□□□ -1.14
TUBGCP4-207ENST00000563963 OS9Q13438 667 aaPredicted RBP7.94□□□□□ -1.14
TUBGCP4-207ENST00000563963 FANCIQ9NVI1 1328 aa7.94□□□□□ -1.14
TUBGCP4-207ENST00000563963 PPM1GO15355 546 aaPredicted RBP7.94□□□□□ -1.14
TUBGCP4-207ENST00000563963 HSP90AA1P07900 732 aaKnown RBP7.94□□□□□ -1.14
TUBGCP4-207ENST00000563963 WDR62O43379 1518 aa7.94□□□□□ -1.14
TUBGCP4-207ENST00000563963 KDM2AQ9Y2K7 1162 aa7.94□□□□□ -1.14
TUBGCP4-207ENST00000563963 MRC2Q9UBG0 1479 aa7.94□□□□□ -1.14
TUBGCP4-207ENST00000563963 CERS3Q8IU89 383 aa7.93□□□□□ -1.14
TUBGCP4-207ENST00000563963 NBR1Q14596 966 aa7.92□□□□□ -1.14
TUBGCP4-207ENST00000563963 CWC22Q9HCG8 908 aaKnown RBP7.92□□□□□ -1.14
TUBGCP4-207ENST00000563963 RNF216Q9NWF9 866 aaPredicted RBP7.91□□□□□ -1.14
TUBGCP4-207ENST00000563963 GTF2E1P29083 439 aaPredicted RBP7.91□□□□□ -1.14
TUBGCP4-207ENST00000563963 GRIPAP1Q4V328 841 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms