RNA–Protein interactions for RNA: ENST00000563512.1

NSMCE1-205, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 4

Gene NSMCE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-205ENST00000563512 RASEFQ8IZ41 740 aa16.39■□□□□ 0.21
NSMCE1-205ENST00000563512 FAM212AQ96EL1 285 aa16.39■□□□□ 0.21
NSMCE1-205ENST00000563512 NACADO15069 1562 aa16.38■□□□□ 0.21
NSMCE1-205ENST00000563512 DCAF8Q5TAQ9 597 aa16.34■□□□□ 0.21
NSMCE1-205ENST00000563512 MYO15BQ96JP2 1530 aa16.34■□□□□ 0.21
NSMCE1-205ENST00000563512 SP7Q8TDD2 431 aaPredicted RBP16.31■□□□□ 0.2
NSMCE1-205ENST00000563512 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
NSMCE1-205ENST00000563512 ZNF579Q8NAF0 562 aaKnown RBP16.28■□□□□ 0.2
NSMCE1-205ENST00000563512 GSE1Q14687 1217 aa16.27■□□□□ 0.2
NSMCE1-205ENST00000563512 CIZ1Q9ULV3 898 aaPredicted RBP16.25■□□□□ 0.19
NSMCE1-205ENST00000563512 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
NSMCE1-205ENST00000563512 CCDC61Q9Y6R9 512 aa16.22■□□□□ 0.19
NSMCE1-205ENST00000563512 UNC13AQ9UPW8 1703 aa16.22■□□□□ 0.19
NSMCE1-205ENST00000563512 CLCN6P51797 869 aa16.21■□□□□ 0.19
NSMCE1-205ENST00000563512 PHF12Q96QT6 1004 aa16.21■□□□□ 0.19
NSMCE1-205ENST00000563512 GABBR2O75899 941 aa16.14■□□□□ 0.17
NSMCE1-205ENST00000563512 PYGBP11216 843 aa16.1■□□□□ 0.17
NSMCE1-205ENST00000563512 KIF12Q96FN5 646 aa16.09■□□□□ 0.17
NSMCE1-205ENST00000563512 MAP3K13O43283 966 aa16.05■□□□□ 0.16
NSMCE1-205ENST00000563512 TRIM41Q8WV44 630 aa16.05■□□□□ 0.16
NSMCE1-205ENST00000563512 PCDHB13Q9Y5F0 798 aa16.03■□□□□ 0.16
NSMCE1-205ENST00000563512 GALR2O43603 387 aaPredicted RBP16.01■□□□□ 0.15
NSMCE1-205ENST00000563512 MS4A3Q96HJ5 214 aa16.01■□□□□ 0.15
NSMCE1-205ENST00000563512 SGIP1Q9BQI5 828 aa16■□□□□ 0.15
NSMCE1-205ENST00000563512 CHRM1P11229 460 aaPredicted RBP15.99■□□□□ 0.15
NSMCE1-205ENST00000563512 DCBLD2Q96PD2 775 aa15.96■□□□□ 0.15
NSMCE1-205ENST00000563512 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
NSMCE1-205ENST00000563512 ECM2O94769 699 aaPredicted RBP15.92■□□□□ 0.14
NSMCE1-205ENST00000563512 ZNF467Q7Z7K2 595 aaPredicted RBP15.92■□□□□ 0.14
NSMCE1-205ENST00000563512 IFNL1Q8IU54 200 aa15.91■□□□□ 0.14
NSMCE1-205ENST00000563512 PKD2Q13563 968 aa15.88■□□□□ 0.13
NSMCE1-205ENST00000563512 PCDHB8Q9UN66 801 aa15.88■□□□□ 0.13
NSMCE1-205ENST00000563512 BICRAQ9NZM4 1560 aa15.86■□□□□ 0.13
NSMCE1-205ENST00000563512 SHROOM4Q9ULL8 1493 aa15.83■□□□□ 0.12
NSMCE1-205ENST00000563512 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
NSMCE1-205ENST00000563512 TIE1P35590 1138 aa15.8■□□□□ 0.12
NSMCE1-205ENST00000563512 TRPC6Q9Y210 931 aa15.8■□□□□ 0.12
NSMCE1-205ENST00000563512 AMER1Q5JTC6 1135 aaPredicted RBP15.79■□□□□ 0.12
NSMCE1-205ENST00000563512 RIOK3O14730 519 aaKnown RBP15.78■□□□□ 0.12
NSMCE1-205ENST00000563512 PDAP1Q13442 181 aaKnown RBP15.75■□□□□ 0.11
NSMCE1-205ENST00000563512 TMEM106CQ9BVX2 250 aa15.75■□□□□ 0.11
NSMCE1-205ENST00000563512 BMP2KQ9NSY1 1161 aaPredicted RBP15.75■□□□□ 0.11
NSMCE1-205ENST00000563512 TAOK2Q9UL54 1235 aa15.75■□□□□ 0.11
NSMCE1-205ENST00000563512 ATMINO43313 823 aaPredicted RBP15.73■□□□□ 0.11
NSMCE1-205ENST00000563512 POTEIP0CG38 1075 aa15.73■□□□□ 0.11
NSMCE1-205ENST00000563512 PSEN1P49768 467 aa15.73■□□□□ 0.11
NSMCE1-205ENST00000563512 ASTLQ6HA08 431 aaPredicted RBP15.73■□□□□ 0.11
NSMCE1-205ENST00000563512 RNF25Q96BH1 459 aaPredicted RBP15.72■□□□□ 0.11
NSMCE1-205ENST00000563512 TTLL13PA6NNM8 815 aa15.71■□□□□ 0.11
NSMCE1-205ENST00000563512 RGL2O15211 777 aa15.7■□□□□ 0.1
NSMCE1-205ENST00000563512 VGFO15240 615 aaPredicted RBP15.69■□□□□ 0.1
NSMCE1-205ENST00000563512 ATN1P54259 1190 aaPredicted RBP15.68■□□□□ 0.1
NSMCE1-205ENST00000563512 RTN4Q9NQC3 1192 aaKnown RBP15.65■□□□□ 0.1
NSMCE1-205ENST00000563512 GOLGA2Q08379 1002 aa15.64■□□□□ 0.09
NSMCE1-205ENST00000563512 TRIM35Q9UPQ4 493 aa15.64■□□□□ 0.09
NSMCE1-205ENST00000563512 PELP1Q8IZL8 1130 aaKnown RBP15.61■□□□□ 0.09
NSMCE1-205ENST00000563512 SLC39A7Q92504 469 aa15.6■□□□□ 0.09
NSMCE1-205ENST00000563512 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.59■□□□□ 0.09
NSMCE1-205ENST00000563512 ZFP91Q96JP5 570 aaPredicted RBP15.59■□□□□ 0.09
NSMCE1-205ENST00000563512 C7P10643 843 aa15.56■□□□□ 0.08
NSMCE1-205ENST00000563512 STK25O00506 426 aa15.54■□□□□ 0.08
NSMCE1-205ENST00000563512 MKRN3Q13064 507 aaKnown RBP15.54■□□□□ 0.08
NSMCE1-205ENST00000563512 CABP2Q9NPB3 220 aa15.54■□□□□ 0.08
NSMCE1-205ENST00000563512 METRNQ9UJH8 293 aa15.54■□□□□ 0.08
NSMCE1-205ENST00000563512 IER5LQ5T953 404 aa15.52■□□□□ 0.08
NSMCE1-205ENST00000563512 BCL11BQ9C0K0 894 aaPredicted RBP15.51■□□□□ 0.07
NSMCE1-205ENST00000563512 STK24Q9Y6E0 443 aa15.51■□□□□ 0.07
NSMCE1-205ENST00000563512 SEC24BO95487 1268 aa15.5■□□□□ 0.07
NSMCE1-205ENST00000563512 CHGAP10645 457 aaKnown RBP15.45■□□□□ 0.06
NSMCE1-205ENST00000563512 EIF4G1Q04637 1599 aaKnown RBP15.44■□□□□ 0.06
NSMCE1-205ENST00000563512 PLCG2P16885 1265 aa15.42■□□□□ 0.06
NSMCE1-205ENST00000563512 EFCAB3Q8N7B9 438 aa15.41■□□□□ 0.06
NSMCE1-205ENST00000563512 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.4■□□□□ 0.06
NSMCE1-205ENST00000563512 HS6ST3Q8IZP7 471 aa15.39■□□□□ 0.05
NSMCE1-205ENST00000563512 OCEL1Q9H607 264 aa15.39■□□□□ 0.05
NSMCE1-205ENST00000563512 CC2D2AQ9P2K1 1620 aa15.37■□□□□ 0.05
NSMCE1-205ENST00000563512 IRX5P78411 483 aaPredicted RBP15.37■□□□□ 0.05
NSMCE1-205ENST00000563512 COLQQ9Y215 455 aaPredicted RBP15.37■□□□□ 0.05
NSMCE1-205ENST00000563512 SOX12O15370 315 aa15.34■□□□□ 0.05
NSMCE1-205ENST00000563512 LHX8Q68G74 356 aa15.34■□□□□ 0.05
NSMCE1-205ENST00000563512 POTEFA5A3E0 1075 aa15.31■□□□□ 0.04
NSMCE1-205ENST00000563512 NLRP6P59044 892 aa15.27■□□□□ 0.04
NSMCE1-205ENST00000563512 PHF8Q9UPP1 1060 aa15.26■□□□□ 0.03
NSMCE1-205ENST00000563512 PDCD7Q8N8D1 485 aaKnown RBP15.25■□□□□ 0.03
NSMCE1-205ENST00000563512 G3V3G9 751 aa15.23■□□□□ 0.03
NSMCE1-205ENST00000563512 POTEB2H3BUK9 544 aa15.23■□□□□ 0.03
NSMCE1-205ENST00000563512 ILDR1Q86SU0 546 aaPredicted RBP15.22■□□□□ 0.03
NSMCE1-205ENST00000563512 L3MBTL3Q96JM7 780 aaPredicted RBP15.22■□□□□ 0.03
NSMCE1-205ENST00000563512 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
NSMCE1-205ENST00000563512 MAMSTRQ6ZN01 415 aa15.21■□□□□ 0.03
NSMCE1-205ENST00000563512 MFRPQ9BY79 579 aa15.2■□□□□ 0.02
NSMCE1-205ENST00000563512 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
NSMCE1-205ENST00000563512 BAZ1AQ9NRL2 1556 aaPredicted RBP15.18■□□□□ 0.02
NSMCE1-205ENST00000563512 DPY19L2Q6NUT2 758 aa15.17■□□□□ 0.02
NSMCE1-205ENST00000563512 SCUBE2Q9NQ36 999 aa15.17■□□□□ 0.02
NSMCE1-205ENST00000563512 CECR2Q9BXF3 1484 aa15.16■□□□□ 0.02
NSMCE1-205ENST00000563512 RYDENQ9NUL5 291 aaKnown RBP15.16■□□□□ 0.02
NSMCE1-205ENST00000563512 FBXO22Q8NEZ5 403 aa15.15■□□□□ 0.02
NSMCE1-205ENST00000563512 MS4A4AQ96JQ5 239 aa15.13■□□□□ 0.01
NSMCE1-205ENST00000563512 POTEJP0CG39 1038 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms