RNA–Protein interactions for RNA: ENST00000560557.1

FAM227B-211, Transcript of family with sequence similarity 227 member B, humanhuman

TSL 3

Gene FAM227B, Length 438 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-211ENST00000560557 C7P10643 843 aa13.07□□□□□ -0.32
FAM227B-211ENST00000560557 MAMSTRQ6ZN01 415 aa13.06□□□□□ -0.32
FAM227B-211ENST00000560557 MS4A3Q96HJ5 214 aa13.06□□□□□ -0.32
FAM227B-211ENST00000560557 MNX1P50219 401 aaPredicted RBP13.03□□□□□ -0.32
FAM227B-211ENST00000560557 FAM163AQ96GL9 167 aaPredicted RBP13.03□□□□□ -0.32
FAM227B-211ENST00000560557 NPM1P06748 294 aaKnown RBP eCLIP13.01□□□□□ -0.33
FAM227B-211ENST00000560557 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
FAM227B-211ENST00000560557 ATN1P54259 1190 aaPredicted RBP12.91□□□□□ -0.34
FAM227B-211ENST00000560557 POTEFA5A3E0 1075 aa12.88□□□□□ -0.35
FAM227B-211ENST00000560557 SPDYE4A6NLX3 237 aa12.84□□□□□ -0.35
FAM227B-211ENST00000560557 CDAN1Q8IWY9 1227 aa12.82□□□□□ -0.36
FAM227B-211ENST00000560557 CCDC61Q9Y6R9 512 aa12.79□□□□□ -0.36
FAM227B-211ENST00000560557 TSPYL2Q9H2G4 693 aaPredicted RBP12.78□□□□□ -0.36
FAM227B-211ENST00000560557 BMP2KQ9NSY1 1161 aaPredicted RBP12.78□□□□□ -0.36
FAM227B-211ENST00000560557 TRPC6Q9Y210 931 aa12.76□□□□□ -0.37
FAM227B-211ENST00000560557 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
FAM227B-211ENST00000560557 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
FAM227B-211ENST00000560557 TIE1P35590 1138 aa12.68□□□□□ -0.38
FAM227B-211ENST00000560557 MAP3K13O43283 966 aa12.63□□□□□ -0.39
FAM227B-211ENST00000560557 SEC24BO95487 1268 aa12.62□□□□□ -0.39
FAM227B-211ENST00000560557 TTLL13PA6NNM8 815 aa12.61□□□□□ -0.39
FAM227B-211ENST00000560557 ST18O60284 1047 aa12.61□□□□□ -0.39
FAM227B-211ENST00000560557 CSRNP3Q8WYN3 585 aa12.61□□□□□ -0.39
FAM227B-211ENST00000560557 MMRN1Q13201 1228 aa12.57□□□□□ -0.4
FAM227B-211ENST00000560557 SLAIN1Q8ND83 568 aa12.55□□□□□ -0.4
FAM227B-211ENST00000560557 IER5LQ5T953 404 aa12.53□□□□□ -0.4
FAM227B-211ENST00000560557 SPNS2Q8IVW8 549 aa12.53□□□□□ -0.4
FAM227B-211ENST00000560557 TRIM35Q9UPQ4 493 aa12.52□□□□□ -0.41
FAM227B-211ENST00000560557 RASEFQ8IZ41 740 aa12.5□□□□□ -0.41
FAM227B-211ENST00000560557 PROM2Q8N271 834 aa12.46□□□□□ -0.41
FAM227B-211ENST00000560557 SGIP1Q9BQI5 828 aa12.41□□□□□ -0.42
FAM227B-211ENST00000560557 TMEM121BQ9BXQ6 578 aaPredicted RBP12.4□□□□□ -0.42
FAM227B-211ENST00000560557 PCDHB13Q9Y5F0 798 aa12.39□□□□□ -0.43
FAM227B-211ENST00000560557 PLCG2P16885 1265 aa12.35□□□□□ -0.43
FAM227B-211ENST00000560557 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
FAM227B-211ENST00000560557 IRX5P78411 483 aaPredicted RBP12.32□□□□□ -0.44
FAM227B-211ENST00000560557 IFNL1Q8IU54 200 aa12.32□□□□□ -0.44
FAM227B-211ENST00000560557 MARVELD3Q96A59 401 aa12.32□□□□□ -0.44
FAM227B-211ENST00000560557 MIER1Q8N108 512 aa12.31□□□□□ -0.44
FAM227B-211ENST00000560557 TMEM106CQ9BVX2 250 aa12.31□□□□□ -0.44
FAM227B-211ENST00000560557 SNPHO15079 494 aa12.28□□□□□ -0.44
FAM227B-211ENST00000560557 OCEL1Q9H607 264 aa12.21□□□□□ -0.45
FAM227B-211ENST00000560557 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.21□□□□□ -0.45
FAM227B-211ENST00000560557 NUBP1P53384 320 aa12.2□□□□□ -0.46
FAM227B-211ENST00000560557 KRTAP3-3Q9BYR6 98 aa12.19□□□□□ -0.46
FAM227B-211ENST00000560557 KRTAP3-2Q9BYR7 98 aa12.19□□□□□ -0.46
FAM227B-211ENST00000560557 EMP3P54852 163 aa12.16□□□□□ -0.46
FAM227B-211ENST00000560557 POTEB3A0JP26 581 aa12.15□□□□□ -0.46
FAM227B-211ENST00000560557 POTEBQ6S5H4 581 aa12.15□□□□□ -0.46
FAM227B-211ENST00000560557 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
FAM227B-211ENST00000560557 HS3ST6Q96QI5 342 aa12.12□□□□□ -0.47
FAM227B-211ENST00000560557 FAM212AQ96EL1 285 aa12.09□□□□□ -0.47
FAM227B-211ENST00000560557 FAM205CA6NFA0 338 aa12.07□□□□□ -0.48
FAM227B-211ENST00000560557 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
FAM227B-211ENST00000560557 PDCD7Q8N8D1 485 aaKnown RBP12.04□□□□□ -0.48
FAM227B-211ENST00000560557 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
FAM227B-211ENST00000560557 C3orf67Q6ZVT6 689 aa12.02□□□□□ -0.49
FAM227B-211ENST00000560557 PCDHB8Q9UN66 801 aa11.98□□□□□ -0.49
FAM227B-211ENST00000560557 PYGBP11216 843 aa11.97□□□□□ -0.49
FAM227B-211ENST00000560557 L3MBTL3Q96JM7 780 aaPredicted RBP11.95□□□□□ -0.5
FAM227B-211ENST00000560557 DCAF8Q5TAQ9 597 aa11.89□□□□□ -0.51
FAM227B-211ENST00000560557 RNF166Q96A37 237 aaPredicted RBP11.87□□□□□ -0.51
FAM227B-211ENST00000560557 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
FAM227B-211ENST00000560557 HOXB3P14651 431 aaPredicted RBP11.85□□□□□ -0.51
FAM227B-211ENST00000560557 GOLGA2Q08379 1002 aa11.83□□□□□ -0.52
FAM227B-211ENST00000560557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.83□□□□□ -0.52
FAM227B-211ENST00000560557 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
FAM227B-211ENST00000560557 ILDR1Q86SU0 546 aaPredicted RBP11.78□□□□□ -0.52
FAM227B-211ENST00000560557 ZNF467Q7Z7K2 595 aaPredicted RBP11.76□□□□□ -0.53
FAM227B-211ENST00000560557 MYT1LQ9UL68 1186 aa11.76□□□□□ -0.53
FAM227B-211ENST00000560557 ERBB3P21860 1342 aa11.76□□□□□ -0.53
FAM227B-211ENST00000560557 DPY19L2Q6NUT2 758 aa11.75□□□□□ -0.53
FAM227B-211ENST00000560557 ZNF710Q8N1W2 664 aa11.73□□□□□ -0.53
FAM227B-211ENST00000560557 PSEN1P49768 467 aa11.7□□□□□ -0.54
FAM227B-211ENST00000560557 DOK7Q18PE1 504 aa11.68□□□□□ -0.54
FAM227B-211ENST00000560557 VARS2Q5ST30 1063 aaKnown RBP11.68□□□□□ -0.54
FAM227B-211ENST00000560557 BOLA1Q9Y3E2 137 aa11.68□□□□□ -0.54
FAM227B-211ENST00000560557 G3V3G9 751 aa11.63□□□□□ -0.55
FAM227B-211ENST00000560557 CHRM1P11229 460 aaPredicted RBP11.63□□□□□ -0.55
FAM227B-211ENST00000560557 GSE1Q14687 1217 aa11.62□□□□□ -0.55
FAM227B-211ENST00000560557 ZNF687Q8N1G0 1237 aa11.61□□□□□ -0.55
FAM227B-211ENST00000560557 PTGER2P43116 358 aa11.59□□□□□ -0.55
FAM227B-211ENST00000560557 RIMBP2O15034 1052 aa11.58□□□□□ -0.56
FAM227B-211ENST00000560557 PDAP1Q13442 181 aaKnown RBP11.57□□□□□ -0.56
FAM227B-211ENST00000560557 CABP2Q9NPB3 220 aa11.57□□□□□ -0.56
FAM227B-211ENST00000560557 ZSWIM6Q9HCJ5 1215 aa11.52□□□□□ -0.57
FAM227B-211ENST00000560557 GPR153Q6NV75 609 aa11.5□□□□□ -0.57
FAM227B-211ENST00000560557 TMEM92Q6UXU6 159 aa11.48□□□□□ -0.57
FAM227B-211ENST00000560557 FKBP8Q14318 412 aa11.47□□□□□ -0.57
FAM227B-211ENST00000560557 ANKRD13DQ6ZTN6 518 aa11.47□□□□□ -0.57
FAM227B-211ENST00000560557 KLHL34Q8N239 644 aa11.45□□□□□ -0.58
FAM227B-211ENST00000560557 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
FAM227B-211ENST00000560557 PLA2G2EQ9NZK7 142 aa11.41□□□□□ -0.58
FAM227B-211ENST00000560557 LSM11P83369 360 aaKnown RBP eCLIP11.4□□□□□ -0.58
FAM227B-211ENST00000560557 MICALL2Q8IY33 904 aa11.39□□□□□ -0.59
FAM227B-211ENST00000560557 ARSIQ5FYB1 569 aa11.37□□□□□ -0.59
FAM227B-211ENST00000560557 ZNF316A6NFI3 1004 aaPredicted RBP11.35□□□□□ -0.59
FAM227B-211ENST00000560557 VASPP50552 380 aaPredicted RBP11.35□□□□□ -0.59
FAM227B-211ENST00000560557 EFCAB3Q8N7B9 438 aa11.35□□□□□ -0.59
FAM227B-211ENST00000560557 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms