RNA–Protein interactions for RNA: ENST00000560350.5

USP3-AS1-206, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 407 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-206ENST00000560350 CLCN6P51797 869 aa14.51□□□□□ -0.09
USP3-AS1-206ENST00000560350 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
USP3-AS1-206ENST00000560350 POTEIP0CG38 1075 aa14.41□□□□□ -0.1
USP3-AS1-206ENST00000560350 MIER1Q8N108 512 aa14.37□□□□□ -0.11
USP3-AS1-206ENST00000560350 PHF12Q96QT6 1004 aa14.37□□□□□ -0.11
USP3-AS1-206ENST00000560350 GALR2O43603 387 aaPredicted RBP14.34□□□□□ -0.11
USP3-AS1-206ENST00000560350 PLEKHG5O94827 1062 aa14.33□□□□□ -0.12
USP3-AS1-206ENST00000560350 EIF4G1Q04637 1599 aaKnown RBP14.3□□□□□ -0.12
USP3-AS1-206ENST00000560350 DCBLD2Q96PD2 775 aa14.29□□□□□ -0.12
USP3-AS1-206ENST00000560350 PLCD3Q8N3E9 789 aa14.28□□□□□ -0.12
USP3-AS1-206ENST00000560350 TSPYL2Q9H2G4 693 aaPredicted RBP14.26□□□□□ -0.13
USP3-AS1-206ENST00000560350 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
USP3-AS1-206ENST00000560350 CCDC61Q9Y6R9 512 aa14.24□□□□□ -0.13
USP3-AS1-206ENST00000560350 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
USP3-AS1-206ENST00000560350 RASEFQ8IZ41 740 aa14.22□□□□□ -0.13
USP3-AS1-206ENST00000560350 LHX8Q68G74 356 aa14.21□□□□□ -0.13
USP3-AS1-206ENST00000560350 MS4A3Q96HJ5 214 aa14.19□□□□□ -0.14
USP3-AS1-206ENST00000560350 ZBTB47Q9UFB7 747 aaPredicted RBP14.17□□□□□ -0.14
USP3-AS1-206ENST00000560350 FBXO3Q9UK99 471 aa14.17□□□□□ -0.14
USP3-AS1-206ENST00000560350 NUBP1P53384 320 aa14.14□□□□□ -0.15
USP3-AS1-206ENST00000560350 KIF12Q96FN5 646 aa14.14□□□□□ -0.15
USP3-AS1-206ENST00000560350 NCAPD3P42695 1498 aa14.08□□□□□ -0.16
USP3-AS1-206ENST00000560350 ASTLQ6HA08 431 aaPredicted RBP14.07□□□□□ -0.16
USP3-AS1-206ENST00000560350 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
USP3-AS1-206ENST00000560350 MAP3K13O43283 966 aa14.05□□□□□ -0.16
USP3-AS1-206ENST00000560350 ATMINO43313 823 aaPredicted RBP14.04□□□□□ -0.16
USP3-AS1-206ENST00000560350 ATAD2BQ9ULI0 1458 aa14.03□□□□□ -0.16
USP3-AS1-206ENST00000560350 BAZ1AQ9NRL2 1556 aaPredicted RBP14.03□□□□□ -0.16
USP3-AS1-206ENST00000560350 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
USP3-AS1-206ENST00000560350 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
USP3-AS1-206ENST00000560350 SMARCA2P51531 1590 aa13.99□□□□□ -0.17
USP3-AS1-206ENST00000560350 TRPC6Q9Y210 931 aa13.98□□□□□ -0.17
USP3-AS1-206ENST00000560350 SMARCA4P51532 1647 aa13.96□□□□□ -0.17
USP3-AS1-206ENST00000560350 BMP2KQ9NSY1 1161 aaPredicted RBP13.95□□□□□ -0.18
USP3-AS1-206ENST00000560350 POTEB2H3BUK9 544 aa13.94□□□□□ -0.18
USP3-AS1-206ENST00000560350 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
USP3-AS1-206ENST00000560350 SGIP1Q9BQI5 828 aa13.94□□□□□ -0.18
USP3-AS1-206ENST00000560350 TIE1P35590 1138 aa13.92□□□□□ -0.18
USP3-AS1-206ENST00000560350 SLC39A7Q92504 469 aa13.92□□□□□ -0.18
USP3-AS1-206ENST00000560350 METRNQ9UJH8 293 aa13.92□□□□□ -0.18
USP3-AS1-206ENST00000560350 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
USP3-AS1-206ENST00000560350 HMGXB3Q12766 1538 aa13.9□□□□□ -0.18
USP3-AS1-206ENST00000560350 C7P10643 843 aa13.9□□□□□ -0.18
USP3-AS1-206ENST00000560350 PLSCR2Q9NRY7 297 aa13.9□□□□□ -0.18
USP3-AS1-206ENST00000560350 MROH2BQ7Z745 1585 aa13.89□□□□□ -0.19
USP3-AS1-206ENST00000560350 PEG3Q9GZU2 1588 aa13.89□□□□□ -0.19
USP3-AS1-206ENST00000560350 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
USP3-AS1-206ENST00000560350 DCAF8Q5TAQ9 597 aa13.87□□□□□ -0.19
USP3-AS1-206ENST00000560350 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
USP3-AS1-206ENST00000560350 IFNL1Q8IU54 200 aa13.86□□□□□ -0.19
USP3-AS1-206ENST00000560350 TTLL13PA6NNM8 815 aa13.85□□□□□ -0.19
USP3-AS1-206ENST00000560350 OTUD5Q96G74 571 aa13.84□□□□□ -0.19
USP3-AS1-206ENST00000560350 PYGBP11216 843 aa13.81□□□□□ -0.2
USP3-AS1-206ENST00000560350 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
USP3-AS1-206ENST00000560350 IFNLR1Q8IU57 520 aaPredicted RBP13.79□□□□□ -0.2
USP3-AS1-206ENST00000560350 POTEFA5A3E0 1075 aa13.78□□□□□ -0.2
USP3-AS1-206ENST00000560350 POTEJP0CG39 1038 aa13.78□□□□□ -0.2
USP3-AS1-206ENST00000560350 GSE1Q14687 1217 aa13.77□□□□□ -0.21
USP3-AS1-206ENST00000560350 TRIM35Q9UPQ4 493 aa13.75□□□□□ -0.21
USP3-AS1-206ENST00000560350 TMEM106CQ9BVX2 250 aa13.72□□□□□ -0.21
USP3-AS1-206ENST00000560350 SPOCK2Q92563 424 aa13.71□□□□□ -0.21
USP3-AS1-206ENST00000560350 IER5LQ5T953 404 aa13.7□□□□□ -0.22
USP3-AS1-206ENST00000560350 PCDHB8Q9UN66 801 aa13.7□□□□□ -0.22
USP3-AS1-206ENST00000560350 CADPSQ9ULU8 1353 aa13.7□□□□□ -0.22
USP3-AS1-206ENST00000560350 COLQQ9Y215 455 aaPredicted RBP13.69□□□□□ -0.22
USP3-AS1-206ENST00000560350 ERCC6Q03468 1493 aa13.68□□□□□ -0.22
USP3-AS1-206ENST00000560350 PDS5BQ9NTI5 1447 aa13.67□□□□□ -0.22
USP3-AS1-206ENST00000560350 CHRM1P11229 460 aaPredicted RBP13.67□□□□□ -0.22
USP3-AS1-206ENST00000560350 WIZO95785 1651 aa13.64□□□□□ -0.23
USP3-AS1-206ENST00000560350 SEC24BO95487 1268 aa13.64□□□□□ -0.23
USP3-AS1-206ENST00000560350 MAMSTRQ6ZN01 415 aa13.64□□□□□ -0.23
USP3-AS1-206ENST00000560350 ZNF467Q7Z7K2 595 aaPredicted RBP13.62□□□□□ -0.23
USP3-AS1-206ENST00000560350 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
USP3-AS1-206ENST00000560350 NESP48681 1621 aa13.61□□□□□ -0.23
USP3-AS1-206ENST00000560350 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
USP3-AS1-206ENST00000560350 SCUBE2Q9NQ36 999 aa13.58□□□□□ -0.24
USP3-AS1-206ENST00000560350 CIZ1Q9ULV3 898 aaPredicted RBP13.58□□□□□ -0.24
USP3-AS1-206ENST00000560350 CUX2O14529 1486 aa13.58□□□□□ -0.24
USP3-AS1-206ENST00000560350 IRX5P78411 483 aaPredicted RBP13.56□□□□□ -0.24
USP3-AS1-206ENST00000560350 CFTRP13569 1480 aa13.55□□□□□ -0.24
USP3-AS1-206ENST00000560350 PLCG2P16885 1265 aa13.52□□□□□ -0.25
USP3-AS1-206ENST00000560350 PSEN1P49768 467 aa13.5□□□□□ -0.25
USP3-AS1-206ENST00000560350 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
USP3-AS1-206ENST00000560350 OCEL1Q9H607 264 aa13.48□□□□□ -0.25
USP3-AS1-206ENST00000560350 SUPT5HO00267 1087 aaKnown RBP13.46□□□□□ -0.25
USP3-AS1-206ENST00000560350 FANCD2Q9BXW9 1451 aa13.45□□□□□ -0.26
USP3-AS1-206ENST00000560350 PDAP1Q13442 181 aaKnown RBP13.45□□□□□ -0.26
USP3-AS1-206ENST00000560350 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
USP3-AS1-206ENST00000560350 MRC2Q9UBG0 1479 aa13.42□□□□□ -0.26
USP3-AS1-206ENST00000560350 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
USP3-AS1-206ENST00000560350 GOLGA2Q08379 1002 aa13.4□□□□□ -0.26
USP3-AS1-206ENST00000560350 PDCD7Q8N8D1 485 aaKnown RBP13.4□□□□□ -0.26
USP3-AS1-206ENST00000560350 MKRN3Q13064 507 aaKnown RBP13.39□□□□□ -0.27
USP3-AS1-206ENST00000560350 LCE2DQ5TA82 110 aaPredicted RBP13.39□□□□□ -0.27
USP3-AS1-206ENST00000560350 POTEMA6NI47 508 aa13.36□□□□□ -0.27
USP3-AS1-206ENST00000560350 DNAJC5Q9H3Z4 198 aa13.35□□□□□ -0.27
USP3-AS1-206ENST00000560350 THOC2Q8NI27 1593 aaKnown RBP13.34□□□□□ -0.27
USP3-AS1-206ENST00000560350 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
USP3-AS1-206ENST00000560350 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
USP3-AS1-206ENST00000560350 SLAIN1Q8ND83 568 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms