RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
SNRPA1-209ENST00000560307 SCUBE2Q9NQ36 999 aa11.27□□□□□ -0.61
SNRPA1-209ENST00000560307 C7P10643 843 aa11.26□□□□□ -0.61
SNRPA1-209ENST00000560307 NISCHQ9Y2I1 1504 aa11.23□□□□□ -0.61
SNRPA1-209ENST00000560307 ASTLQ6HA08 431 aaPredicted RBP11.21□□□□□ -0.61
SNRPA1-209ENST00000560307 CDAN1Q8IWY9 1227 aa11.2□□□□□ -0.62
SNRPA1-209ENST00000560307 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
SNRPA1-209ENST00000560307 MS4A3Q96HJ5 214 aa11.18□□□□□ -0.62
SNRPA1-209ENST00000560307 STAG3Q9UJ98 1225 aa11.15□□□□□ -0.62
SNRPA1-209ENST00000560307 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
SNRPA1-209ENST00000560307 ATN1P54259 1190 aaPredicted RBP11.06□□□□□ -0.64
SNRPA1-209ENST00000560307 RTN4Q9NQC3 1192 aaKnown RBP11.02□□□□□ -0.65
SNRPA1-209ENST00000560307 AMER1Q5JTC6 1135 aaPredicted RBP11□□□□□ -0.65
SNRPA1-209ENST00000560307 SLC24A1O60721 1099 aa10.98□□□□□ -0.65
SNRPA1-209ENST00000560307 MMRN1Q13201 1228 aa10.98□□□□□ -0.65
SNRPA1-209ENST00000560307 POTEFA5A3E0 1075 aa10.96□□□□□ -0.65
SNRPA1-209ENST00000560307 SEC24BO95487 1268 aa10.94□□□□□ -0.66
SNRPA1-209ENST00000560307 MNX1P50219 401 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-209ENST00000560307 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-209ENST00000560307 FKBP8Q14318 412 aa10.92□□□□□ -0.66
SNRPA1-209ENST00000560307 BMP2KQ9NSY1 1161 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-209ENST00000560307 ST18O60284 1047 aa10.91□□□□□ -0.66
SNRPA1-209ENST00000560307 SPNS2Q8IVW8 549 aa10.91□□□□□ -0.66
SNRPA1-209ENST00000560307 SLAIN1Q8ND83 568 aa10.87□□□□□ -0.67
SNRPA1-209ENST00000560307 COLQQ9Y215 455 aaPredicted RBP10.86□□□□□ -0.67
SNRPA1-209ENST00000560307 TRPC6Q9Y210 931 aa10.85□□□□□ -0.67
SNRPA1-209ENST00000560307 KIF12Q96FN5 646 aa10.83□□□□□ -0.68
SNRPA1-209ENST00000560307 CCDC61Q9Y6R9 512 aa10.83□□□□□ -0.68
SNRPA1-209ENST00000560307 TIE1P35590 1138 aa10.81□□□□□ -0.68
SNRPA1-209ENST00000560307 SPDYE4A6NLX3 237 aa10.79□□□□□ -0.68
SNRPA1-209ENST00000560307 TTLL13PA6NNM8 815 aa10.75□□□□□ -0.69
SNRPA1-209ENST00000560307 MAP3K13O43283 966 aa10.75□□□□□ -0.69
SNRPA1-209ENST00000560307 TMEM121BQ9BXQ6 578 aaPredicted RBP10.71□□□□□ -0.69
SNRPA1-209ENST00000560307 TRIM35Q9UPQ4 493 aa10.71□□□□□ -0.69
SNRPA1-209ENST00000560307 IER5LQ5T953 404 aa10.7□□□□□ -0.7
SNRPA1-209ENST00000560307 MARVELD3Q96A59 401 aa10.7□□□□□ -0.7
SNRPA1-209ENST00000560307 PLCG2P16885 1265 aa10.64□□□□□ -0.71
SNRPA1-209ENST00000560307 SNPHO15079 494 aa10.63□□□□□ -0.71
SNRPA1-209ENST00000560307 PCDHB13Q9Y5F0 798 aa10.57□□□□□ -0.72
SNRPA1-209ENST00000560307 EMP3P54852 163 aa10.56□□□□□ -0.72
SNRPA1-209ENST00000560307 RASEFQ8IZ41 740 aa10.55□□□□□ -0.72
SNRPA1-209ENST00000560307 PLEKHG5O94827 1062 aa10.53□□□□□ -0.72
SNRPA1-209ENST00000560307 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.53□□□□□ -0.72
SNRPA1-209ENST00000560307 TMEM106CQ9BVX2 250 aa10.52□□□□□ -0.73
SNRPA1-209ENST00000560307 KRTAP3-3Q9BYR6 98 aa10.5□□□□□ -0.73
SNRPA1-209ENST00000560307 KRTAP3-2Q9BYR7 98 aa10.5□□□□□ -0.73
SNRPA1-209ENST00000560307 SGIP1Q9BQI5 828 aa10.49□□□□□ -0.73
SNRPA1-209ENST00000560307 FAM205CA6NFA0 338 aa10.47□□□□□ -0.73
SNRPA1-209ENST00000560307 HS3ST6Q96QI5 342 aa10.47□□□□□ -0.73
SNRPA1-209ENST00000560307 IRX5P78411 483 aaPredicted RBP10.46□□□□□ -0.73
SNRPA1-209ENST00000560307 IFNL1Q8IU54 200 aa10.44□□□□□ -0.74
SNRPA1-209ENST00000560307 MIER1Q8N108 512 aa10.43□□□□□ -0.74
SNRPA1-209ENST00000560307 OCEL1Q9H607 264 aa10.43□□□□□ -0.74
SNRPA1-209ENST00000560307 POTEB3A0JP26 581 aa10.4□□□□□ -0.74
SNRPA1-209ENST00000560307 POTEBQ6S5H4 581 aa10.4□□□□□ -0.74
SNRPA1-209ENST00000560307 C3orf67Q6ZVT6 689 aa10.37□□□□□ -0.75
SNRPA1-209ENST00000560307 RNF166Q96A37 237 aaPredicted RBP10.36□□□□□ -0.75
SNRPA1-209ENST00000560307 FBXO3Q9UK99 471 aa10.31□□□□□ -0.76
SNRPA1-209ENST00000560307 PLCD3Q8N3E9 789 aa10.27□□□□□ -0.77
SNRPA1-209ENST00000560307 PROM2Q8N271 834 aa10.26□□□□□ -0.77
SNRPA1-209ENST00000560307 FAM212AQ96EL1 285 aa10.26□□□□□ -0.77
SNRPA1-209ENST00000560307 MYT1LQ9UL68 1186 aa10.23□□□□□ -0.77
SNRPA1-209ENST00000560307 L3MBTL3Q96JM7 780 aaPredicted RBP10.22□□□□□ -0.77
SNRPA1-209ENST00000560307 DCAF8L2P0C7V8 631 aa10.21□□□□□ -0.77
SNRPA1-209ENST00000560307 NUBP1P53384 320 aa10.21□□□□□ -0.77
SNRPA1-209ENST00000560307 ZBTB47Q9UFB7 747 aaPredicted RBP10.21□□□□□ -0.77
SNRPA1-209ENST00000560307 PDCD7Q8N8D1 485 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-209ENST00000560307 ERBB3P21860 1342 aa10.18□□□□□ -0.78
SNRPA1-209ENST00000560307 GOLGA2Q08379 1002 aa10.18□□□□□ -0.78
SNRPA1-209ENST00000560307 VASPP50552 380 aaPredicted RBP10.16□□□□□ -0.78
SNRPA1-209ENST00000560307 ZNF710Q8N1W2 664 aa10.15□□□□□ -0.78
SNRPA1-209ENST00000560307 PCDHB8Q9UN66 801 aa10.15□□□□□ -0.78
SNRPA1-209ENST00000560307 PYGBP11216 843 aa10.14□□□□□ -0.79
SNRPA1-209ENST00000560307 MKRN3Q13064 507 aaKnown RBP10.14□□□□□ -0.79
SNRPA1-209ENST00000560307 PLCB2Q00722 1185 aa10.13□□□□□ -0.79
SNRPA1-209ENST00000560307 HAP1P54257 671 aaPredicted RBP10.1□□□□□ -0.79
SNRPA1-209ENST00000560307 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.1□□□□□ -0.79
SNRPA1-209ENST00000560307 HOXB1P14653 301 aaPredicted RBP10.09□□□□□ -0.79
SNRPA1-209ENST00000560307 VARS2Q5ST30 1063 aaKnown RBP10.08□□□□□ -0.8
SNRPA1-209ENST00000560307 DCAF8Q5TAQ9 597 aa10.08□□□□□ -0.8
SNRPA1-209ENST00000560307 HOXB3P14651 431 aaPredicted RBP10.07□□□□□ -0.8
SNRPA1-209ENST00000560307 G3V3G9 751 aa10.06□□□□□ -0.8
SNRPA1-209ENST00000560307 IFNLR1Q8IU57 520 aaPredicted RBP10.05□□□□□ -0.8
SNRPA1-209ENST00000560307 DOK7Q18PE1 504 aa10.03□□□□□ -0.8
SNRPA1-209ENST00000560307 PTGER2P43116 358 aa10.02□□□□□ -0.81
SNRPA1-209ENST00000560307 RIMBP2O15034 1052 aa10□□□□□ -0.81
SNRPA1-209ENST00000560307 ANKRD13DQ6ZTN6 518 aa9.97□□□□□ -0.81
SNRPA1-209ENST00000560307 DPY19L2Q6NUT2 758 aa9.96□□□□□ -0.82
SNRPA1-209ENST00000560307 ZNF687Q8N1G0 1237 aa9.96□□□□□ -0.82
SNRPA1-209ENST00000560307 PLA2G2EQ9NZK7 142 aa9.96□□□□□ -0.82
SNRPA1-209ENST00000560307 ZNF467Q7Z7K2 595 aaPredicted RBP9.95□□□□□ -0.82
SNRPA1-209ENST00000560307 KLHL34Q8N239 644 aa9.95□□□□□ -0.82
SNRPA1-209ENST00000560307 BOLA1Q9Y3E2 137 aa9.95□□□□□ -0.82
SNRPA1-209ENST00000560307 PKD2Q13563 968 aa9.94□□□□□ -0.82
SNRPA1-209ENST00000560307 HRCP23327 699 aa9.93□□□□□ -0.82
SNRPA1-209ENST00000560307 PSEN1P49768 467 aa9.89□□□□□ -0.83
SNRPA1-209ENST00000560307 BCANQ96GW7 911 aa9.89□□□□□ -0.83
SNRPA1-209ENST00000560307 ECM2O94769 699 aaPredicted RBP9.86□□□□□ -0.83
SNRPA1-209ENST00000560307 SPOCK2Q92563 424 aa9.85□□□□□ -0.83
SNRPA1-209ENST00000560307 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms