RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
CLPX-206ENST00000560166 POTEJP0CG39 1038 aa12.66□□□□□ -0.38
CLPX-206ENST00000560166 C7P10643 843 aa12.65□□□□□ -0.38
CLPX-206ENST00000560166 METRNQ9UJH8 293 aa12.65□□□□□ -0.38
CLPX-206ENST00000560166 SLC39A7Q92504 469 aa12.64□□□□□ -0.39
CLPX-206ENST00000560166 ATMINO43313 823 aaPredicted RBP12.63□□□□□ -0.39
CLPX-206ENST00000560166 MAMSTRQ6ZN01 415 aa12.62□□□□□ -0.39
CLPX-206ENST00000560166 MS4A3Q96HJ5 214 aa12.6□□□□□ -0.39
CLPX-206ENST00000560166 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
CLPX-206ENST00000560166 LCE2DQ5TA82 110 aaPredicted RBP12.58□□□□□ -0.4
CLPX-206ENST00000560166 FAM163AQ96GL9 167 aaPredicted RBP12.5□□□□□ -0.41
CLPX-206ENST00000560166 CCDC180Q9P1Z9 1646 aa12.49□□□□□ -0.41
CLPX-206ENST00000560166 SCUBE2Q9NQ36 999 aa12.47□□□□□ -0.41
CLPX-206ENST00000560166 ATN1P54259 1190 aaPredicted RBP12.46□□□□□ -0.41
CLPX-206ENST00000560166 POTEFA5A3E0 1075 aa12.42□□□□□ -0.42
CLPX-206ENST00000560166 CCDC61Q9Y6R9 512 aa12.42□□□□□ -0.42
CLPX-206ENST00000560166 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
CLPX-206ENST00000560166 TSPYL2Q9H2G4 693 aaPredicted RBP12.39□□□□□ -0.43
CLPX-206ENST00000560166 BMP2KQ9NSY1 1161 aaPredicted RBP12.35□□□□□ -0.43
CLPX-206ENST00000560166 TIE1P35590 1138 aa12.31□□□□□ -0.44
CLPX-206ENST00000560166 TRPC6Q9Y210 931 aa12.3□□□□□ -0.44
CLPX-206ENST00000560166 CDAN1Q8IWY9 1227 aa12.27□□□□□ -0.45
CLPX-206ENST00000560166 MAP3K13O43283 966 aa12.26□□□□□ -0.45
CLPX-206ENST00000560166 COLQQ9Y215 455 aaPredicted RBP12.26□□□□□ -0.45
CLPX-206ENST00000560166 PROM2Q8N271 834 aa12.25□□□□□ -0.45
CLPX-206ENST00000560166 SEC24BO95487 1268 aa12.21□□□□□ -0.45
CLPX-206ENST00000560166 TTLL13PA6NNM8 815 aa12.2□□□□□ -0.46
CLPX-206ENST00000560166 IER5LQ5T953 404 aa12.17□□□□□ -0.46
CLPX-206ENST00000560166 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
CLPX-206ENST00000560166 ST18O60284 1047 aa12.13□□□□□ -0.47
CLPX-206ENST00000560166 SGIP1Q9BQI5 828 aa12.13□□□□□ -0.47
CLPX-206ENST00000560166 TRIM35Q9UPQ4 493 aa12.11□□□□□ -0.47
CLPX-206ENST00000560166 SLAIN1Q8ND83 568 aa12.09□□□□□ -0.47
CLPX-206ENST00000560166 PLEKHG5O94827 1062 aa12.08□□□□□ -0.48
CLPX-206ENST00000560166 MIER1Q8N108 512 aa12.06□□□□□ -0.48
CLPX-206ENST00000560166 RB1CC1Q8TDY2 1594 aa12.05□□□□□ -0.48
CLPX-206ENST00000560166 MMRN1Q13201 1228 aa12.03□□□□□ -0.48
CLPX-206ENST00000560166 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
CLPX-206ENST00000560166 SPNS2Q8IVW8 549 aa12.01□□□□□ -0.49
CLPX-206ENST00000560166 TMEM121BQ9BXQ6 578 aaPredicted RBP11.98□□□□□ -0.49
CLPX-206ENST00000560166 ZCCHC6Q5VYS8 1495 aaKnown RBP11.96□□□□□ -0.49
CLPX-206ENST00000560166 PLCG2P16885 1265 aa11.96□□□□□ -0.49
CLPX-206ENST00000560166 IFNL1Q8IU54 200 aa11.96□□□□□ -0.49
CLPX-206ENST00000560166 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
CLPX-206ENST00000560166 TMEM106CQ9BVX2 250 aa11.94□□□□□ -0.5
CLPX-206ENST00000560166 NUBP1P53384 320 aa11.93□□□□□ -0.5
CLPX-206ENST00000560166 SNPHO15079 494 aa11.89□□□□□ -0.51
CLPX-206ENST00000560166 DCAF1Q9Y4B6 1507 aa11.88□□□□□ -0.51
CLPX-206ENST00000560166 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
CLPX-206ENST00000560166 OCEL1Q9H607 264 aa11.87□□□□□ -0.51
CLPX-206ENST00000560166 DCAF8L2P0C7V8 631 aa11.86□□□□□ -0.51
CLPX-206ENST00000560166 ZBTB47Q9UFB7 747 aaPredicted RBP11.86□□□□□ -0.51
CLPX-206ENST00000560166 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
CLPX-206ENST00000560166 DNAJC5Q9H3Z4 198 aa11.82□□□□□ -0.52
CLPX-206ENST00000560166 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.82□□□□□ -0.52
CLPX-206ENST00000560166 NACADO15069 1562 aa11.82□□□□□ -0.52
CLPX-206ENST00000560166 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
CLPX-206ENST00000560166 FAM212AQ96EL1 285 aa11.81□□□□□ -0.52
CLPX-206ENST00000560166 UNC13AQ9UPW8 1703 aa11.74□□□□□ -0.53
CLPX-206ENST00000560166 KRTAP3-3Q9BYR6 98 aa11.7□□□□□ -0.54
CLPX-206ENST00000560166 KRTAP3-2Q9BYR7 98 aa11.7□□□□□ -0.54
CLPX-206ENST00000560166 POTEB3A0JP26 581 aa11.69□□□□□ -0.54
CLPX-206ENST00000560166 EMP3P54852 163 aa11.69□□□□□ -0.54
CLPX-206ENST00000560166 POTEBQ6S5H4 581 aa11.69□□□□□ -0.54
CLPX-206ENST00000560166 CECR2Q9BXF3 1484 aa11.68□□□□□ -0.54
CLPX-206ENST00000560166 PDCD7Q8N8D1 485 aaKnown RBP11.67□□□□□ -0.54
CLPX-206ENST00000560166 BICRAQ9NZM4 1560 aa11.67□□□□□ -0.54
CLPX-206ENST00000560166 PYGBP11216 843 aa11.66□□□□□ -0.54
CLPX-206ENST00000560166 HS3ST6Q96QI5 342 aa11.65□□□□□ -0.54
CLPX-206ENST00000560166 PCDHB8Q9UN66 801 aa11.65□□□□□ -0.54
CLPX-206ENST00000560166 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
CLPX-206ENST00000560166 FKBP8Q14318 412 aa11.63□□□□□ -0.55
CLPX-206ENST00000560166 C3orf67Q6ZVT6 689 aa11.63□□□□□ -0.55
CLPX-206ENST00000560166 L3MBTL3Q96JM7 780 aaPredicted RBP11.63□□□□□ -0.55
CLPX-206ENST00000560166 CC2D2AQ9P2K1 1620 aa11.61□□□□□ -0.55
CLPX-206ENST00000560166 FAM205CA6NFA0 338 aa11.61□□□□□ -0.55
CLPX-206ENST00000560166 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
CLPX-206ENST00000560166 MKRN3Q13064 507 aaKnown RBP11.55□□□□□ -0.56
CLPX-206ENST00000560166 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
CLPX-206ENST00000560166 GOLGA2Q08379 1002 aa11.51□□□□□ -0.57
CLPX-206ENST00000560166 ZNF467Q7Z7K2 595 aaPredicted RBP11.51□□□□□ -0.57
CLPX-206ENST00000560166 ILDR1Q86SU0 546 aaPredicted RBP11.51□□□□□ -0.57
CLPX-206ENST00000560166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.5□□□□□ -0.575e-6■■■■□ 22.9
CLPX-206ENST00000560166 EIF4G1Q04637 1599 aaKnown RBP11.46□□□□□ -0.57
CLPX-206ENST00000560166 HOXB3P14651 431 aaPredicted RBP11.46□□□□□ -0.57
CLPX-206ENST00000560166 CHRM1P11229 460 aaPredicted RBP11.45□□□□□ -0.58
CLPX-206ENST00000560166 SHROOM4Q9ULL8 1493 aa11.44□□□□□ -0.58
CLPX-206ENST00000560166 HOXB1P14653 301 aaPredicted RBP11.43□□□□□ -0.58
CLPX-206ENST00000560166 PSEN1P49768 467 aa11.42□□□□□ -0.58
CLPX-206ENST00000560166 GSE1Q14687 1217 aa11.42□□□□□ -0.58
CLPX-206ENST00000560166 DPY19L2Q6NUT2 758 aa11.41□□□□□ -0.58
CLPX-206ENST00000560166 RNF166Q96A37 237 aaPredicted RBP11.38□□□□□ -0.59
CLPX-206ENST00000560166 SLC24A1O60721 1099 aa11.37□□□□□ -0.59
CLPX-206ENST00000560166 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
CLPX-206ENST00000560166 ERBB3P21860 1342 aa11.36□□□□□ -0.59
CLPX-206ENST00000560166 ZNF710Q8N1W2 664 aa11.35□□□□□ -0.59
CLPX-206ENST00000560166 SCRIBQ14160 1630 aa11.35□□□□□ -0.59
CLPX-206ENST00000560166 DOK7Q18PE1 504 aa11.34□□□□□ -0.59
CLPX-206ENST00000560166 FBXO3Q9UK99 471 aa11.32□□□□□ -0.6
CLPX-206ENST00000560166 G3V3G9 751 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms