RNA–Protein interactions for RNA: ENST00000560047.1

CRTC3-207, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-207ENST00000560047 RTN4Q9NQC3 1192 aaKnown RBP17.07■□□□□ 0.32
CRTC3-207ENST00000560047 ZRANB1Q9UGI0 708 aa17.03■□□□□ 0.32
CRTC3-207ENST00000560047 PKD2Q13563 968 aa17.01■□□□□ 0.31
CRTC3-207ENST00000560047 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
CRTC3-207ENST00000560047 CCDC61Q9Y6R9 512 aa16.96■□□□□ 0.31
CRTC3-207ENST00000560047 ECM2O94769 699 aaPredicted RBP16.92■□□□□ 0.3
CRTC3-207ENST00000560047 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
CRTC3-207ENST00000560047 CHRM1P11229 460 aaPredicted RBP16.91■□□□□ 0.3
CRTC3-207ENST00000560047 EVX2Q03828 476 aa16.9■□□□□ 0.3
CRTC3-207ENST00000560047 ZNF579Q8NAF0 562 aaKnown RBP16.89■□□□□ 0.29
CRTC3-207ENST00000560047 PYGBP11216 843 aa16.88■□□□□ 0.29
CRTC3-207ENST00000560047 PHF12Q96QT6 1004 aa16.83■□□□□ 0.28
CRTC3-207ENST00000560047 KIF12Q96FN5 646 aa16.81■□□□□ 0.28
CRTC3-207ENST00000560047 CLCN6P51797 869 aa16.77■□□□□ 0.28
CRTC3-207ENST00000560047 MAP3K13O43283 966 aa16.76■□□□□ 0.27
CRTC3-207ENST00000560047 SGIP1Q9BQI5 828 aa16.76■□□□□ 0.27
CRTC3-207ENST00000560047 PCDHB13Q9Y5F0 798 aa16.74■□□□□ 0.27
CRTC3-207ENST00000560047 RGL2O15211 777 aa16.72■□□□□ 0.27
CRTC3-207ENST00000560047 ZNF467Q7Z7K2 595 aaPredicted RBP16.7■□□□□ 0.26
CRTC3-207ENST00000560047 RIOK3O14730 519 aaKnown RBP16.68■□□□□ 0.26
CRTC3-207ENST00000560047 RNF25Q96BH1 459 aaPredicted RBP16.67■□□□□ 0.26
CRTC3-207ENST00000560047 IFNL1Q8IU54 200 aa16.65■□□□□ 0.26
CRTC3-207ENST00000560047 TAOK2Q9UL54 1235 aa16.65■□□□□ 0.26
CRTC3-207ENST00000560047 PCDHB8Q9UN66 801 aa16.65■□□□□ 0.26
CRTC3-207ENST00000560047 SP7Q8TDD2 431 aaPredicted RBP16.64■□□□□ 0.25
CRTC3-207ENST00000560047 MS4A3Q96HJ5 214 aa16.63■□□□□ 0.25
CRTC3-207ENST00000560047 GABBR2O75899 941 aa16.62■□□□□ 0.25
CRTC3-207ENST00000560047 DCAF8L2P0C7V8 631 aa16.61■□□□□ 0.25
CRTC3-207ENST00000560047 VGFO15240 615 aaPredicted RBP16.58■□□□□ 0.24
CRTC3-207ENST00000560047 GALR2O43603 387 aaPredicted RBP16.58■□□□□ 0.24
CRTC3-207ENST00000560047 PDAP1Q13442 181 aaKnown RBP16.55■□□□□ 0.24
CRTC3-207ENST00000560047 PSEN1P49768 467 aa16.51■□□□□ 0.23
CRTC3-207ENST00000560047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.47■□□□□ 0.23
CRTC3-207ENST00000560047 ZFP91Q96JP5 570 aaPredicted RBP16.47■□□□□ 0.23
CRTC3-207ENST00000560047 TRPC6Q9Y210 931 aa16.47■□□□□ 0.23
CRTC3-207ENST00000560047 TIE1P35590 1138 aa16.46■□□□□ 0.23
CRTC3-207ENST00000560047 CHGAP10645 457 aaKnown RBP16.44■□□□□ 0.22
CRTC3-207ENST00000560047 STK25O00506 426 aa16.42■□□□□ 0.22
CRTC3-207ENST00000560047 TMEM106CQ9BVX2 250 aa16.42■□□□□ 0.22
CRTC3-207ENST00000560047 DCBLD2Q96PD2 775 aa16.41■□□□□ 0.22
CRTC3-207ENST00000560047 HS6ST3Q8IZP7 471 aa16.39■□□□□ 0.21
CRTC3-207ENST00000560047 BCL11BQ9C0K0 894 aaPredicted RBP16.39■□□□□ 0.21
CRTC3-207ENST00000560047 BMP2KQ9NSY1 1161 aaPredicted RBP16.39■□□□□ 0.21
CRTC3-207ENST00000560047 STK24Q9Y6E0 443 aa16.37■□□□□ 0.21
CRTC3-207ENST00000560047 TTLL13PA6NNM8 815 aa16.36■□□□□ 0.21
CRTC3-207ENST00000560047 ATMINO43313 823 aaPredicted RBP16.33■□□□□ 0.2
CRTC3-207ENST00000560047 ASTLQ6HA08 431 aaPredicted RBP16.33■□□□□ 0.2
CRTC3-207ENST00000560047 ATN1P54259 1190 aaPredicted RBP16.29■□□□□ 0.2
CRTC3-207ENST00000560047 GOLGA2Q08379 1002 aa16.29■□□□□ 0.2
CRTC3-207ENST00000560047 CABP2Q9NPB3 220 aa16.29■□□□□ 0.2
CRTC3-207ENST00000560047 TRIM35Q9UPQ4 493 aa16.27■□□□□ 0.2
CRTC3-207ENST00000560047 BBXQ8WY36 941 aaPredicted RBP16.25■□□□□ 0.19
CRTC3-207ENST00000560047 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
CRTC3-207ENST00000560047 POTEIP0CG38 1075 aa16.23■□□□□ 0.19
CRTC3-207ENST00000560047 MKRN3Q13064 507 aaKnown RBP16.22■□□□□ 0.19
CRTC3-207ENST00000560047 EFCAB3Q8N7B9 438 aa16.2■□□□□ 0.18
CRTC3-207ENST00000560047 PELP1Q8IZL8 1130 aaKnown RBP16.18■□□□□ 0.18
CRTC3-207ENST00000560047 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.18■□□□□ 0.18
CRTC3-207ENST00000560047 SOX12O15370 315 aa16.17■□□□□ 0.18
CRTC3-207ENST00000560047 IER5LQ5T953 404 aa16.15■□□□□ 0.18
CRTC3-207ENST00000560047 SLC39A7Q92504 469 aa16.13■□□□□ 0.17
CRTC3-207ENST00000560047 NKX1-1Q15270 411 aaPredicted RBP16.12■□□□□ 0.17
CRTC3-207ENST00000560047 C7P10643 843 aa16.11■□□□□ 0.17
CRTC3-207ENST00000560047 NLRP6P59044 892 aa16.08■□□□□ 0.16
CRTC3-207ENST00000560047 RYDENQ9NUL5 291 aaKnown RBP16.08■□□□□ 0.16
CRTC3-207ENST00000560047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.08■□□□□ 0.16
CRTC3-207ENST00000560047 MFRPQ9BY79 579 aa16.07■□□□□ 0.16
CRTC3-207ENST00000560047 PHF8Q9UPP1 1060 aa16.06■□□□□ 0.16
CRTC3-207ENST00000560047 SEC24BO95487 1268 aa16.04■□□□□ 0.16
CRTC3-207ENST00000560047 SPRYD3Q8NCJ5 442 aa16.04■□□□□ 0.16
CRTC3-207ENST00000560047 OCEL1Q9H607 264 aa16.04■□□□□ 0.16
CRTC3-207ENST00000560047 METRNQ9UJH8 293 aa16.04■□□□□ 0.16
CRTC3-207ENST00000560047 IRX5P78411 483 aaPredicted RBP16.03■□□□□ 0.16
CRTC3-207ENST00000560047 ILDR1Q86SU0 546 aaPredicted RBP16.02■□□□□ 0.16
CRTC3-207ENST00000560047 PLCG2P16885 1265 aa16.01■□□□□ 0.15
CRTC3-207ENST00000560047 PAXIP1Q6ZW49 1069 aaPredicted RBP16.01■□□□□ 0.15
CRTC3-207ENST00000560047 FBXO22Q8NEZ5 403 aa16.01■□□□□ 0.15
CRTC3-207ENST00000560047 GTPBP6O43824 516 aaPredicted RBP16■□□□□ 0.15
CRTC3-207ENST00000560047 CFAP44Q96MT7 982 aa15.98■□□□□ 0.15
CRTC3-207ENST00000560047 COLQQ9Y215 455 aaPredicted RBP15.97■□□□□ 0.15
CRTC3-207ENST00000560047 PDCD7Q8N8D1 485 aaKnown RBP15.94■□□□□ 0.14
CRTC3-207ENST00000560047 MS4A4AQ96JQ5 239 aa15.94■□□□□ 0.14
CRTC3-207ENST00000560047 POTEFA5A3E0 1075 aa15.92■□□□□ 0.14
CRTC3-207ENST00000560047 PLCB2Q00722 1185 aa15.92■□□□□ 0.14
CRTC3-207ENST00000560047 DPY19L2Q6NUT2 758 aa15.89■□□□□ 0.13
CRTC3-207ENST00000560047 PPP1R37O75864 691 aa15.85■□□□□ 0.13
CRTC3-207ENST00000560047 L3MBTL3Q96JM7 780 aaPredicted RBP15.85■□□□□ 0.13
CRTC3-207ENST00000560047 G3V3G9 751 aa15.82■□□□□ 0.12
CRTC3-207ENST00000560047 BOLA1Q9Y3E2 137 aa15.79■□□□□ 0.12
CRTC3-207ENST00000560047 MICALL2Q8IY33 904 aa15.74■□□□□ 0.11
CRTC3-207ENST00000560047 TMEM121BQ9BXQ6 578 aaPredicted RBP15.73■□□□□ 0.11
CRTC3-207ENST00000560047 POTEB2H3BUK9 544 aa15.72■□□□□ 0.11
CRTC3-207ENST00000560047 HAP1P54257 671 aaPredicted RBP15.69■□□□□ 0.1
CRTC3-207ENST00000560047 TSHZ2Q9NRE2 1034 aa15.68■□□□□ 0.1
CRTC3-207ENST00000560047 POTEJP0CG39 1038 aa15.66■□□□□ 0.1
CRTC3-207ENST00000560047 MAMSTRQ6ZN01 415 aa15.65■□□□□ 0.1
CRTC3-207ENST00000560047 C3orf67Q6ZVT6 689 aa15.65■□□□□ 0.1
CRTC3-207ENST00000560047 LHX8Q68G74 356 aa15.64■□□□□ 0.09
CRTC3-207ENST00000560047 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.62■□□□□ 0.09
CRTC3-207ENST00000560047 SCUBE2Q9NQ36 999 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms