RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
CRNDE-207ENST00000559598 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
CRNDE-207ENST00000559598 PHF12Q96QT6 1004 aa13.65□□□□□ -0.22
CRNDE-207ENST00000559598 GALR2O43603 387 aaPredicted RBP13.63□□□□□ -0.23
CRNDE-207ENST00000559598 LHX8Q68G74 356 aa13.6□□□□□ -0.23
CRNDE-207ENST00000559598 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
CRNDE-207ENST00000559598 SPOCK2Q92563 424 aa13.55□□□□□ -0.24
CRNDE-207ENST00000559598 CCDC61Q9Y6R9 512 aa13.54□□□□□ -0.24
CRNDE-207ENST00000559598 NUBP1P53384 320 aa13.53□□□□□ -0.24
CRNDE-207ENST00000559598 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
CRNDE-207ENST00000559598 RASEFQ8IZ41 740 aa13.48□□□□□ -0.25
CRNDE-207ENST00000559598 KIF12Q96FN5 646 aa13.44□□□□□ -0.26
CRNDE-207ENST00000559598 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
CRNDE-207ENST00000559598 ASTLQ6HA08 431 aaPredicted RBP13.4□□□□□ -0.26
CRNDE-207ENST00000559598 DCAF8Q5TAQ9 597 aa13.38□□□□□ -0.27
CRNDE-207ENST00000559598 GSE1Q14687 1217 aa13.37□□□□□ -0.27
CRNDE-207ENST00000559598 MAP3K13O43283 966 aa13.36□□□□□ -0.27
CRNDE-207ENST00000559598 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
CRNDE-207ENST00000559598 SGIP1Q9BQI5 828 aa13.35□□□□□ -0.27
CRNDE-207ENST00000559598 CIZ1Q9ULV3 898 aaPredicted RBP13.35□□□□□ -0.27
CRNDE-207ENST00000559598 SLC39A7Q92504 469 aa13.34□□□□□ -0.27
CRNDE-207ENST00000559598 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
CRNDE-207ENST00000559598 C7P10643 843 aa13.31□□□□□ -0.28
CRNDE-207ENST00000559598 RB1CC1Q8TDY2 1594 aa13.3□□□□□ -0.28
CRNDE-207ENST00000559598 TIE1P35590 1138 aa13.3□□□□□ -0.28
CRNDE-207ENST00000559598 METRNQ9UJH8 293 aa13.28□□□□□ -0.28
CRNDE-207ENST00000559598 PCDHB13Q9Y5F0 798 aa13.28□□□□□ -0.28
CRNDE-207ENST00000559598 ATN1P54259 1190 aaPredicted RBP13.26□□□□□ -0.29
CRNDE-207ENST00000559598 BMP2KQ9NSY1 1161 aaPredicted RBP13.26□□□□□ -0.29
CRNDE-207ENST00000559598 PKD2Q13563 968 aa13.23□□□□□ -0.29
CRNDE-207ENST00000559598 AMER1Q5JTC6 1135 aaPredicted RBP13.23□□□□□ -0.29
CRNDE-207ENST00000559598 PYGBP11216 843 aa13.22□□□□□ -0.29
CRNDE-207ENST00000559598 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
CRNDE-207ENST00000559598 TRPC6Q9Y210 931 aa13.22□□□□□ -0.29
CRNDE-207ENST00000559598 POTEB2H3BUK9 544 aa13.2□□□□□ -0.3
CRNDE-207ENST00000559598 CHRM1P11229 460 aaPredicted RBP13.19□□□□□ -0.3
CRNDE-207ENST00000559598 TTLL13PA6NNM8 815 aa13.18□□□□□ -0.3
CRNDE-207ENST00000559598 ECM2O94769 699 aaPredicted RBP13.17□□□□□ -0.3
CRNDE-207ENST00000559598 IFNL1Q8IU54 200 aa13.17□□□□□ -0.3
CRNDE-207ENST00000559598 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
CRNDE-207ENST00000559598 OTUD5Q96G74 571 aa13.16□□□□□ -0.3
CRNDE-207ENST00000559598 MAMSTRQ6ZN01 415 aa13.14□□□□□ -0.31
CRNDE-207ENST00000559598 NACADO15069 1562 aa13.13□□□□□ -0.31
CRNDE-207ENST00000559598 IER5LQ5T953 404 aa13.11□□□□□ -0.31
CRNDE-207ENST00000559598 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
CRNDE-207ENST00000559598 SEC24BO95487 1268 aa13.08□□□□□ -0.32
CRNDE-207ENST00000559598 TMEM106CQ9BVX2 250 aa13.08□□□□□ -0.32
CRNDE-207ENST00000559598 SCUBE2Q9NQ36 999 aa13.06□□□□□ -0.32
CRNDE-207ENST00000559598 ZNF467Q7Z7K2 595 aaPredicted RBP13.05□□□□□ -0.32
CRNDE-207ENST00000559598 RNF25Q96BH1 459 aaPredicted RBP13.04□□□□□ -0.32
CRNDE-207ENST00000559598 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
CRNDE-207ENST00000559598 RGL2O15211 777 aa13.03□□□□□ -0.32
CRNDE-207ENST00000559598 PCDHB8Q9UN66 801 aa13.03□□□□□ -0.32
CRNDE-207ENST00000559598 POTEJP0CG39 1038 aa13.02□□□□□ -0.33
CRNDE-207ENST00000559598 RIOK3O14730 519 aaKnown RBP13.01□□□□□ -0.33
CRNDE-207ENST00000559598 UNC13AQ9UPW8 1703 aa13□□□□□ -0.33
CRNDE-207ENST00000559598 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
CRNDE-207ENST00000559598 PLCG2P16885 1265 aa12.95□□□□□ -0.34
CRNDE-207ENST00000559598 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
CRNDE-207ENST00000559598 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
CRNDE-207ENST00000559598 PDAP1Q13442 181 aaKnown RBP12.92□□□□□ -0.34
CRNDE-207ENST00000559598 PSEN1P49768 467 aa12.91□□□□□ -0.34
CRNDE-207ENST00000559598 IRX5P78411 483 aaPredicted RBP12.9□□□□□ -0.34
CRNDE-207ENST00000559598 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
CRNDE-207ENST00000559598 GOLGA2Q08379 1002 aa12.88□□□□□ -0.35
CRNDE-207ENST00000559598 OCEL1Q9H607 264 aa12.88□□□□□ -0.35
CRNDE-207ENST00000559598 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
CRNDE-207ENST00000559598 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.86□□□□□ -0.35
CRNDE-207ENST00000559598 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
CRNDE-207ENST00000559598 ZFP91Q96JP5 570 aaPredicted RBP12.86□□□□□ -0.35
CRNDE-207ENST00000559598 MKRN3Q13064 507 aaKnown RBP12.84□□□□□ -0.35
CRNDE-207ENST00000559598 SHROOM4Q9ULL8 1493 aa12.81□□□□□ -0.36
CRNDE-207ENST00000559598 STK25O00506 426 aa12.8□□□□□ -0.36
CRNDE-207ENST00000559598 POTEMA6NI47 508 aa12.79□□□□□ -0.36
CRNDE-207ENST00000559598 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
CRNDE-207ENST00000559598 CHGAP10645 457 aaKnown RBP12.77□□□□□ -0.37
CRNDE-207ENST00000559598 STK24Q9Y6E0 443 aa12.77□□□□□ -0.37
CRNDE-207ENST00000559598 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
CRNDE-207ENST00000559598 HS6ST3Q8IZP7 471 aa12.76□□□□□ -0.37
CRNDE-207ENST00000559598 SLAIN1Q8ND83 568 aa12.76□□□□□ -0.37
CRNDE-207ENST00000559598 FAM163AQ96GL9 167 aaPredicted RBP12.75□□□□□ -0.37
CRNDE-207ENST00000559598 CABP2Q9NPB3 220 aa12.75□□□□□ -0.37
CRNDE-207ENST00000559598 L3MBTL3Q96JM7 780 aaPredicted RBP12.72□□□□□ -0.37
CRNDE-207ENST00000559598 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.72□□□□□ -0.37
CRNDE-207ENST00000559598 PDCD7Q8N8D1 485 aaKnown RBP12.71□□□□□ -0.37
CRNDE-207ENST00000559598 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.71□□□□□ -0.37
CRNDE-207ENST00000559598 PCDH10Q9P2E7 1040 aa12.69□□□□□ -0.38
CRNDE-207ENST00000559598 CC2D2AQ9P2K1 1620 aa12.69□□□□□ -0.38
CRNDE-207ENST00000559598 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
CRNDE-207ENST00000559598 EFCAB3Q8N7B9 438 aa12.68□□□□□ -0.38
CRNDE-207ENST00000559598 LCE2DQ5TA82 110 aaPredicted RBP12.66□□□□□ -0.38
CRNDE-207ENST00000559598 C3orf67Q6ZVT6 689 aa12.65□□□□□ -0.38
CRNDE-207ENST00000559598 DNAJC5Q9H3Z4 198 aa12.65□□□□□ -0.38
CRNDE-207ENST00000559598 ILDR1Q86SU0 546 aaPredicted RBP12.64□□□□□ -0.39
CRNDE-207ENST00000559598 SNPHO15079 494 aa12.62□□□□□ -0.39
CRNDE-207ENST00000559598 SOX12O15370 315 aa12.61□□□□□ -0.39
CRNDE-207ENST00000559598 EIF4G1Q04637 1599 aaKnown RBP12.6□□□□□ -0.39
CRNDE-207ENST00000559598 G3V3G9 751 aa12.6□□□□□ -0.39
CRNDE-207ENST00000559598 DCAF1Q9Y4B6 1507 aa12.58□□□□□ -0.4
CRNDE-207ENST00000559598 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms