RNA–Protein interactions for RNA: ENST00000559196.1

SEMA6D-213, Transcript of semaphorin 6D, humanhuman

TSL 2

Gene SEMA6D, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-213ENST00000559196 KIF12Q96FN5 646 aa12.26□□□□□ -0.45
SEMA6D-213ENST00000559196 ATMINO43313 823 aaPredicted RBP12.25□□□□□ -0.45
SEMA6D-213ENST00000559196 OTUD5Q96G74 571 aa12.24□□□□□ -0.45
SEMA6D-213ENST00000559196 RASEFQ8IZ41 740 aa12.23□□□□□ -0.45
SEMA6D-213ENST00000559196 MIER1Q8N108 512 aa12.23□□□□□ -0.45
SEMA6D-213ENST00000559196 TSPYL2Q9H2G4 693 aaPredicted RBP12.23□□□□□ -0.45
SEMA6D-213ENST00000559196 NUBP1P53384 320 aa12.16□□□□□ -0.46
SEMA6D-213ENST00000559196 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
SEMA6D-213ENST00000559196 POTEJP0CG39 1038 aa12.15□□□□□ -0.46
SEMA6D-213ENST00000559196 C7P10643 843 aa12.15□□□□□ -0.46
SEMA6D-213ENST00000559196 FKBP8Q14318 412 aa12.15□□□□□ -0.46
SEMA6D-213ENST00000559196 SLC39A7Q92504 469 aa12.14□□□□□ -0.47
SEMA6D-213ENST00000559196 MAP3K13O43283 966 aa12.13□□□□□ -0.47
SEMA6D-213ENST00000559196 TRPC6Q9Y210 931 aa12.13□□□□□ -0.47
SEMA6D-213ENST00000559196 ATN1P54259 1190 aaPredicted RBP12.12□□□□□ -0.47
SEMA6D-213ENST00000559196 METRNQ9UJH8 293 aa12.12□□□□□ -0.47
SEMA6D-213ENST00000559196 BMP2KQ9NSY1 1161 aaPredicted RBP12.11□□□□□ -0.47
SEMA6D-213ENST00000559196 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
SEMA6D-213ENST00000559196 SGIP1Q9BQI5 828 aa12.09□□□□□ -0.47
SEMA6D-213ENST00000559196 POTEFA5A3E0 1075 aa12.08□□□□□ -0.48
SEMA6D-213ENST00000559196 TIE1P35590 1138 aa12.08□□□□□ -0.48
SEMA6D-213ENST00000559196 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
SEMA6D-213ENST00000559196 ABCC9O60706 1549 aa12.03□□□□□ -0.48
SEMA6D-213ENST00000559196 TTLL13PA6NNM8 815 aa12□□□□□ -0.49
SEMA6D-213ENST00000559196 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
SEMA6D-213ENST00000559196 PCDHB13Q9Y5F0 798 aa11.95□□□□□ -0.5
SEMA6D-213ENST00000559196 MAMSTRQ6ZN01 415 aa11.94□□□□□ -0.5
SEMA6D-213ENST00000559196 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
SEMA6D-213ENST00000559196 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
SEMA6D-213ENST00000559196 COLQQ9Y215 455 aaPredicted RBP11.93□□□□□ -0.5
SEMA6D-213ENST00000559196 IER5LQ5T953 404 aa11.92□□□□□ -0.5
SEMA6D-213ENST00000559196 LCE2DQ5TA82 110 aaPredicted RBP11.89□□□□□ -0.51
SEMA6D-213ENST00000559196 TRIM35Q9UPQ4 493 aa11.88□□□□□ -0.51
SEMA6D-213ENST00000559196 VASPP50552 380 aaPredicted RBP11.84□□□□□ -0.51
SEMA6D-213ENST00000559196 POTEMA6NI47 508 aa11.82□□□□□ -0.52
SEMA6D-213ENST00000559196 SCUBE2Q9NQ36 999 aa11.82□□□□□ -0.52
SEMA6D-213ENST00000559196 TMEM106CQ9BVX2 250 aa11.81□□□□□ -0.52
SEMA6D-213ENST00000559196 IRX5P78411 483 aaPredicted RBP11.8□□□□□ -0.52
SEMA6D-213ENST00000559196 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
SEMA6D-213ENST00000559196 PYGBP11216 843 aa11.78□□□□□ -0.52
SEMA6D-213ENST00000559196 DCAF8Q5TAQ9 597 aa11.78□□□□□ -0.52
SEMA6D-213ENST00000559196 CHRM1P11229 460 aaPredicted RBP11.77□□□□□ -0.53
SEMA6D-213ENST00000559196 SEC24BO95487 1268 aa11.76□□□□□ -0.53
SEMA6D-213ENST00000559196 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
SEMA6D-213ENST00000559196 GSE1Q14687 1217 aa11.71□□□□□ -0.53
SEMA6D-213ENST00000559196 PCDH10Q9P2E7 1040 aa11.71□□□□□ -0.53
SEMA6D-213ENST00000559196 ZCCHC6Q5VYS8 1495 aaKnown RBP11.69□□□□□ -0.54
SEMA6D-213ENST00000559196 IFNLR1Q8IU57 520 aaPredicted RBP11.67□□□□□ -0.54
SEMA6D-213ENST00000559196 OCEL1Q9H607 264 aa11.67□□□□□ -0.54
SEMA6D-213ENST00000559196 FAM163AQ96GL9 167 aaPredicted RBP11.66□□□□□ -0.54
SEMA6D-213ENST00000559196 PLCG2P16885 1265 aa11.65□□□□□ -0.54
SEMA6D-213ENST00000559196 ZNF467Q7Z7K2 595 aaPredicted RBP11.65□□□□□ -0.54
SEMA6D-213ENST00000559196 KLHL34Q8N239 644 aa11.65□□□□□ -0.54
SEMA6D-213ENST00000559196 ILDR1Q86SU0 546 aaPredicted RBP11.63□□□□□ -0.55
SEMA6D-213ENST00000559196 PLSCR2Q9NRY7 297 aa11.63□□□□□ -0.55
SEMA6D-213ENST00000559196 PDCD7Q8N8D1 485 aaKnown RBP11.62□□□□□ -0.55
SEMA6D-213ENST00000559196 UNC13AQ9UPW8 1703 aa11.6□□□□□ -0.55
SEMA6D-213ENST00000559196 NACADO15069 1562 aa11.6□□□□□ -0.55
SEMA6D-213ENST00000559196 RB1CC1Q8TDY2 1594 aa11.59□□□□□ -0.55
SEMA6D-213ENST00000559196 DCAF8L2P0C7V8 631 aa11.59□□□□□ -0.55
SEMA6D-213ENST00000559196 SLAIN1Q8ND83 568 aa11.58□□□□□ -0.56
SEMA6D-213ENST00000559196 SPOCK2Q92563 424 aa11.58□□□□□ -0.56
SEMA6D-213ENST00000559196 DCAF1Q9Y4B6 1507 aa11.55□□□□□ -0.56
SEMA6D-213ENST00000559196 PSEN1P49768 467 aa11.55□□□□□ -0.56
SEMA6D-213ENST00000559196 ST18O60284 1047 aa11.53□□□□□ -0.56
SEMA6D-213ENST00000559196 MYO15BQ96JP2 1530 aa11.53□□□□□ -0.56
SEMA6D-213ENST00000559196 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
SEMA6D-213ENST00000559196 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.57
SEMA6D-213ENST00000559196 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.46□□□□□ -0.57
SEMA6D-213ENST00000559196 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
SEMA6D-213ENST00000559196 TMEM121BQ9BXQ6 578 aaPredicted RBP11.43□□□□□ -0.58
SEMA6D-213ENST00000559196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.43□□□□□ -0.58
SEMA6D-213ENST00000559196 CDAN1Q8IWY9 1227 aa11.42□□□□□ -0.58
SEMA6D-213ENST00000559196 CIZ1Q9ULV3 898 aaPredicted RBP11.42□□□□□ -0.58
SEMA6D-213ENST00000559196 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
SEMA6D-213ENST00000559196 GOLGA2Q08379 1002 aa11.4□□□□□ -0.58
SEMA6D-213ENST00000559196 SNPHO15079 494 aa11.39□□□□□ -0.59
SEMA6D-213ENST00000559196 DPY19L2Q6NUT2 758 aa11.39□□□□□ -0.59
SEMA6D-213ENST00000559196 SCRIBQ14160 1630 aa11.38□□□□□ -0.59
SEMA6D-213ENST00000559196 BICRAQ9NZM4 1560 aa11.37□□□□□ -0.59
SEMA6D-213ENST00000559196 CABP2Q9NPB3 220 aa11.36□□□□□ -0.59
SEMA6D-213ENST00000559196 C3orf67Q6ZVT6 689 aa11.33□□□□□ -0.6
SEMA6D-213ENST00000559196 RNF25Q96BH1 459 aaPredicted RBP11.32□□□□□ -0.6
SEMA6D-213ENST00000559196 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
SEMA6D-213ENST00000559196 EFCAB3Q8N7B9 438 aa11.27□□□□□ -0.61
SEMA6D-213ENST00000559196 HOXB3P14651 431 aaPredicted RBP11.26□□□□□ -0.61
SEMA6D-213ENST00000559196 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
SEMA6D-213ENST00000559196 POTEB3A0JP26 581 aa11.25□□□□□ -0.61
SEMA6D-213ENST00000559196 POTEBQ6S5H4 581 aa11.25□□□□□ -0.61
SEMA6D-213ENST00000559196 RIOK3O14730 519 aaKnown RBP11.24□□□□□ -0.61
SEMA6D-213ENST00000559196 MS4A4AQ96JQ5 239 aa11.21□□□□□ -0.61
SEMA6D-213ENST00000559196 SOX12O15370 315 aa11.2□□□□□ -0.62
SEMA6D-213ENST00000559196 SPNS2Q8IVW8 549 aa11.2□□□□□ -0.62
SEMA6D-213ENST00000559196 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.18□□□□□ -0.62
SEMA6D-213ENST00000559196 VGFO15240 615 aaPredicted RBP11.18□□□□□ -0.62
SEMA6D-213ENST00000559196 ZFP91Q96JP5 570 aaPredicted RBP11.18□□□□□ -0.62
SEMA6D-213ENST00000559196 TMEM92Q6UXU6 159 aa11.17□□□□□ -0.62
SEMA6D-213ENST00000559196 KRTAP3-3Q9BYR6 98 aa11.17□□□□□ -0.62
SEMA6D-213ENST00000559196 KRTAP3-2Q9BYR7 98 aa11.17□□□□□ -0.62
SEMA6D-213ENST00000559196 EMP3P54852 163 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms