RNA–Protein interactions for RNA: ENST00000558990.5

RAB8B-203, Transcript of RAB8B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB8B, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8B-203ENST00000558990 MS4A3Q96HJ5 214 aa14.27□□□□□ -0.13
RAB8B-203ENST00000558990 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.13
RAB8B-203ENST00000558990 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
RAB8B-203ENST00000558990 SLC39A7Q92504 469 aa14.24□□□□□ -0.13
RAB8B-203ENST00000558990 C7P10643 843 aa14.23□□□□□ -0.13
RAB8B-203ENST00000558990 ZBTB47Q9UFB7 747 aaPredicted RBP14.23□□□□□ -0.13
RAB8B-203ENST00000558990 ATMINO43313 823 aaPredicted RBP14.21□□□□□ -0.13
RAB8B-203ENST00000558990 PELP1Q8IZL8 1130 aaKnown RBP14.19□□□□□ -0.14
RAB8B-203ENST00000558990 PLCD3Q8N3E9 789 aa14.18□□□□□ -0.14
RAB8B-203ENST00000558990 KIF12Q96FN5 646 aa14.18□□□□□ -0.14
RAB8B-203ENST00000558990 OTUD5Q96G74 571 aa14.18□□□□□ -0.14
RAB8B-203ENST00000558990 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
RAB8B-203ENST00000558990 METRNQ9UJH8 293 aa14.17□□□□□ -0.14
RAB8B-203ENST00000558990 POTEB2H3BUK9 544 aa14.13□□□□□ -0.15
RAB8B-203ENST00000558990 MAMSTRQ6ZN01 415 aa14.13□□□□□ -0.15
RAB8B-203ENST00000558990 FKBP8Q14318 412 aa14.11□□□□□ -0.15
RAB8B-203ENST00000558990 RASEFQ8IZ41 740 aa14.1□□□□□ -0.15
RAB8B-203ENST00000558990 SLC24A1O60721 1099 aa14.08□□□□□ -0.16
RAB8B-203ENST00000558990 TIE1P35590 1138 aa14.08□□□□□ -0.16
RAB8B-203ENST00000558990 SGIP1Q9BQI5 828 aa14.08□□□□□ -0.16
RAB8B-203ENST00000558990 MAP3K13O43283 966 aa14.05□□□□□ -0.16
RAB8B-203ENST00000558990 ATN1P54259 1190 aaPredicted RBP14.05□□□□□ -0.16
RAB8B-203ENST00000558990 BMP2KQ9NSY1 1161 aaPredicted RBP14.02□□□□□ -0.17
RAB8B-203ENST00000558990 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
RAB8B-203ENST00000558990 SCUBE2Q9NQ36 999 aa13.99□□□□□ -0.17
RAB8B-203ENST00000558990 NUBP1P53384 320 aa13.98□□□□□ -0.17
RAB8B-203ENST00000558990 FBXO3Q9UK99 471 aa13.97□□□□□ -0.17
RAB8B-203ENST00000558990 PCDHB13Q9Y5F0 798 aa13.95□□□□□ -0.18
RAB8B-203ENST00000558990 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
RAB8B-203ENST00000558990 IER5LQ5T953 404 aa13.93□□□□□ -0.18
RAB8B-203ENST00000558990 POTEJP0CG39 1038 aa13.92□□□□□ -0.18
RAB8B-203ENST00000558990 TRPC6Q9Y210 931 aa13.92□□□□□ -0.18
RAB8B-203ENST00000558990 CCDC180Q9P1Z9 1646 aa13.92□□□□□ -0.18
RAB8B-203ENST00000558990 SEC24BO95487 1268 aa13.9□□□□□ -0.18
RAB8B-203ENST00000558990 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
RAB8B-203ENST00000558990 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
RAB8B-203ENST00000558990 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
RAB8B-203ENST00000558990 POTEMA6NI47 508 aa13.87□□□□□ -0.19
RAB8B-203ENST00000558990 PCDH10Q9P2E7 1040 aa13.86□□□□□ -0.19
RAB8B-203ENST00000558990 POTEFA5A3E0 1075 aa13.84□□□□□ -0.19
RAB8B-203ENST00000558990 PLSCR2Q9NRY7 297 aa13.84□□□□□ -0.19
RAB8B-203ENST00000558990 TRIM35Q9UPQ4 493 aa13.84□□□□□ -0.19
RAB8B-203ENST00000558990 POTEGQ6S5H5 508 aa13.83□□□□□ -0.2
RAB8B-203ENST00000558990 IFNL1Q8IU54 200 aa13.82□□□□□ -0.2
RAB8B-203ENST00000558990 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
RAB8B-203ENST00000558990 DCAF8Q5TAQ9 597 aa13.77□□□□□ -0.21
RAB8B-203ENST00000558990 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
RAB8B-203ENST00000558990 PLCG2P16885 1265 aa13.71□□□□□ -0.21
RAB8B-203ENST00000558990 FAM163AQ96GL9 167 aaPredicted RBP13.71□□□□□ -0.21
RAB8B-203ENST00000558990 GSE1Q14687 1217 aa13.7□□□□□ -0.22
RAB8B-203ENST00000558990 CC2D2AQ9P2K1 1620 aa13.68□□□□□ -0.22
RAB8B-203ENST00000558990 PYGBP11216 843 aa13.67□□□□□ -0.22
RAB8B-203ENST00000558990 VASPP50552 380 aaPredicted RBP13.67□□□□□ -0.22
RAB8B-203ENST00000558990 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
RAB8B-203ENST00000558990 CUX2O14529 1486 aa13.63□□□□□ -0.23
RAB8B-203ENST00000558990 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
RAB8B-203ENST00000558990 OCEL1Q9H607 264 aa13.63□□□□□ -0.23
RAB8B-203ENST00000558990 BICRAQ9NZM4 1560 aa13.62□□□□□ -0.23
RAB8B-203ENST00000558990 LCE2DQ5TA82 110 aaPredicted RBP13.62□□□□□ -0.23
RAB8B-203ENST00000558990 ZNF467Q7Z7K2 595 aaPredicted RBP13.62□□□□□ -0.23
RAB8B-203ENST00000558990 CHRM1P11229 460 aaPredicted RBP13.59□□□□□ -0.23
RAB8B-203ENST00000558990 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
RAB8B-203ENST00000558990 PCDHB8Q9UN66 801 aa13.57□□□□□ -0.24
RAB8B-203ENST00000558990 GOLGA2Q08379 1002 aa13.52□□□□□ -0.25
RAB8B-203ENST00000558990 UNC13AQ9UPW8 1703 aa13.5□□□□□ -0.25
RAB8B-203ENST00000558990 SNPHO15079 494 aa13.5□□□□□ -0.25
RAB8B-203ENST00000558990 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.49□□□□□ -0.25
RAB8B-203ENST00000558990 NACADO15069 1562 aa13.49□□□□□ -0.25
RAB8B-203ENST00000558990 MKRN3Q13064 507 aaKnown RBP13.48□□□□□ -0.25
RAB8B-203ENST00000558990 SPOCK2Q92563 424 aa13.45□□□□□ -0.26
RAB8B-203ENST00000558990 L3MBTL3Q96JM7 780 aaPredicted RBP13.45□□□□□ -0.26
RAB8B-203ENST00000558990 TMEM121BQ9BXQ6 578 aaPredicted RBP13.44□□□□□ -0.26
RAB8B-203ENST00000558990 ST18O60284 1047 aa13.43□□□□□ -0.26
RAB8B-203ENST00000558990 PSEN1P49768 467 aa13.42□□□□□ -0.26
RAB8B-203ENST00000558990 PDAP1Q13442 181 aaKnown RBP13.4□□□□□ -0.26
RAB8B-203ENST00000558990 CDAN1Q8IWY9 1227 aa13.4□□□□□ -0.26
RAB8B-203ENST00000558990 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
RAB8B-203ENST00000558990 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
RAB8B-203ENST00000558990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.36□□□□□ -0.27
RAB8B-203ENST00000558990 EIF4G1Q04637 1599 aaKnown RBP13.36□□□□□ -0.27
RAB8B-203ENST00000558990 IFNLR1Q8IU57 520 aaPredicted RBP13.35□□□□□ -0.27
RAB8B-203ENST00000558990 CIZ1Q9ULV3 898 aaPredicted RBP13.35□□□□□ -0.27
RAB8B-203ENST00000558990 ILDR1Q86SU0 546 aaPredicted RBP13.31□□□□□ -0.28
RAB8B-203ENST00000558990 G3V3G9 751 aa13.26□□□□□ -0.29
RAB8B-203ENST00000558990 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
RAB8B-203ENST00000558990 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
RAB8B-203ENST00000558990 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
RAB8B-203ENST00000558990 BOLA1Q9Y3E2 137 aa13.18□□□□□ -0.3
RAB8B-203ENST00000558990 DCAF8L2P0C7V8 631 aa13.15□□□□□ -0.3
RAB8B-203ENST00000558990 EMP3P54852 163 aa13.14□□□□□ -0.31
RAB8B-203ENST00000558990 MARVELD3Q96A59 401 aa13.14□□□□□ -0.31
RAB8B-203ENST00000558990 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
RAB8B-203ENST00000558990 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
RAB8B-203ENST00000558990 SPNS2Q8IVW8 549 aa13.07□□□□□ -0.32
RAB8B-203ENST00000558990 RIOK3O14730 519 aaKnown RBP13.05□□□□□ -0.32
RAB8B-203ENST00000558990 MMRN1Q13201 1228 aa13.04□□□□□ -0.32
RAB8B-203ENST00000558990 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
RAB8B-203ENST00000558990 EFCAB3Q8N7B9 438 aa13.04□□□□□ -0.32
RAB8B-203ENST00000558990 SOX12O15370 315 aa13.03□□□□□ -0.32
RAB8B-203ENST00000558990 ZNF710Q8N1W2 664 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms