RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 GALR2O43603 387 aaPredicted RBP13.53□□□□□ -0.24
ZEB1-211ENST00000558440 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
ZEB1-211ENST00000558440 PHF12Q96QT6 1004 aa13.52□□□□□ -0.25
ZEB1-211ENST00000558440 TSPYL2Q9H2G4 693 aaPredicted RBP13.51□□□□□ -0.25
ZEB1-211ENST00000558440 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
ZEB1-211ENST00000558440 PLSCR2Q9NRY7 297 aa13.48□□□□□ -0.25
ZEB1-211ENST00000558440 NUBP1P53384 320 aa13.46□□□□□ -0.25
ZEB1-211ENST00000558440 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
ZEB1-211ENST00000558440 OTUD5Q96G74 571 aa13.39□□□□□ -0.27
ZEB1-211ENST00000558440 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
ZEB1-211ENST00000558440 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
ZEB1-211ENST00000558440 POTEB2H3BUK9 544 aa13.35□□□□□ -0.27
ZEB1-211ENST00000558440 KIF12Q96FN5 646 aa13.35□□□□□ -0.27
ZEB1-211ENST00000558440 MS4A3Q96HJ5 214 aa13.35□□□□□ -0.27
ZEB1-211ENST00000558440 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
ZEB1-211ENST00000558440 MAP3K13O43283 966 aa13.28□□□□□ -0.28
ZEB1-211ENST00000558440 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
ZEB1-211ENST00000558440 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
ZEB1-211ENST00000558440 POTEMA6NI47 508 aa13.22□□□□□ -0.29
ZEB1-211ENST00000558440 SGIP1Q9BQI5 828 aa13.22□□□□□ -0.29
ZEB1-211ENST00000558440 RB1CC1Q8TDY2 1594 aa13.21□□□□□ -0.29
ZEB1-211ENST00000558440 SPOCK2Q92563 424 aa13.21□□□□□ -0.29
ZEB1-211ENST00000558440 METRNQ9UJH8 293 aa13.21□□□□□ -0.29
ZEB1-211ENST00000558440 ASTLQ6HA08 431 aaPredicted RBP13.2□□□□□ -0.3
ZEB1-211ENST00000558440 GSE1Q14687 1217 aa13.19□□□□□ -0.3
ZEB1-211ENST00000558440 PCDHB13Q9Y5F0 798 aa13.19□□□□□ -0.3
ZEB1-211ENST00000558440 ATMINO43313 823 aaPredicted RBP13.18□□□□□ -0.3
ZEB1-211ENST00000558440 SLC39A7Q92504 469 aa13.18□□□□□ -0.3
ZEB1-211ENST00000558440 C7P10643 843 aa13.17□□□□□ -0.3
ZEB1-211ENST00000558440 POTEGQ6S5H5 508 aa13.17□□□□□ -0.3
ZEB1-211ENST00000558440 TRPC6Q9Y210 931 aa13.17□□□□□ -0.3
ZEB1-211ENST00000558440 PYGBP11216 843 aa13.15□□□□□ -0.3
ZEB1-211ENST00000558440 TIE1P35590 1138 aa13.13□□□□□ -0.31
ZEB1-211ENST00000558440 IFNL1Q8IU54 200 aa13.13□□□□□ -0.31
ZEB1-211ENST00000558440 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
ZEB1-211ENST00000558440 ATN1P54259 1190 aaPredicted RBP13.1□□□□□ -0.31
ZEB1-211ENST00000558440 MAMSTRQ6ZN01 415 aa13.1□□□□□ -0.31
ZEB1-211ENST00000558440 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
ZEB1-211ENST00000558440 TTLL13PA6NNM8 815 aa13.07□□□□□ -0.32
ZEB1-211ENST00000558440 CHRM1P11229 460 aaPredicted RBP13.06□□□□□ -0.32
ZEB1-211ENST00000558440 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
ZEB1-211ENST00000558440 NACADO15069 1562 aa13.05□□□□□ -0.32
ZEB1-211ENST00000558440 PCDH10Q9P2E7 1040 aa13.03□□□□□ -0.32
ZEB1-211ENST00000558440 SCUBE2Q9NQ36 999 aa13.02□□□□□ -0.33
ZEB1-211ENST00000558440 PCDHB8Q9UN66 801 aa13.02□□□□□ -0.33
ZEB1-211ENST00000558440 ZNF467Q7Z7K2 595 aaPredicted RBP12.99□□□□□ -0.33
ZEB1-211ENST00000558440 TMEM106CQ9BVX2 250 aa12.99□□□□□ -0.33
ZEB1-211ENST00000558440 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
ZEB1-211ENST00000558440 TRIM35Q9UPQ4 493 aa12.98□□□□□ -0.33
ZEB1-211ENST00000558440 UNC13AQ9UPW8 1703 aa12.97□□□□□ -0.33
ZEB1-211ENST00000558440 TRIM41Q8WV44 630 aa12.94□□□□□ -0.34
ZEB1-211ENST00000558440 DCAF8L2P0C7V8 631 aa12.92□□□□□ -0.34
ZEB1-211ENST00000558440 IER5LQ5T953 404 aa12.91□□□□□ -0.34
ZEB1-211ENST00000558440 POTEFA5A3E0 1075 aa12.9□□□□□ -0.34
ZEB1-211ENST00000558440 LCE2DQ5TA82 110 aaPredicted RBP12.9□□□□□ -0.34
ZEB1-211ENST00000558440 SEC24BO95487 1268 aa12.87□□□□□ -0.35
ZEB1-211ENST00000558440 PSEN1P49768 467 aa12.86□□□□□ -0.35
ZEB1-211ENST00000558440 COLQQ9Y215 455 aaPredicted RBP12.85□□□□□ -0.35
ZEB1-211ENST00000558440 PDAP1Q13442 181 aaKnown RBP12.84□□□□□ -0.35
ZEB1-211ENST00000558440 BICRAQ9NZM4 1560 aa12.79□□□□□ -0.36
ZEB1-211ENST00000558440 IRX5P78411 483 aaPredicted RBP12.79□□□□□ -0.36
ZEB1-211ENST00000558440 MYO15BQ96JP2 1530 aa12.78□□□□□ -0.36
ZEB1-211ENST00000558440 PLCG2P16885 1265 aa12.77□□□□□ -0.37
ZEB1-211ENST00000558440 RNF25Q96BH1 459 aaPredicted RBP12.76□□□□□ -0.37
ZEB1-211ENST00000558440 GOLGA2Q08379 1002 aa12.75□□□□□ -0.37
ZEB1-211ENST00000558440 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
ZEB1-211ENST00000558440 OCEL1Q9H607 264 aa12.74□□□□□ -0.37
ZEB1-211ENST00000558440 MKRN3Q13064 507 aaKnown RBP12.73□□□□□ -0.37
ZEB1-211ENST00000558440 CABP2Q9NPB3 220 aa12.7□□□□□ -0.38
ZEB1-211ENST00000558440 PKD2Q13563 968 aa12.69□□□□□ -0.38
ZEB1-211ENST00000558440 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
ZEB1-211ENST00000558440 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
ZEB1-211ENST00000558440 CDAN1Q8IWY9 1227 aa12.68□□□□□ -0.38
ZEB1-211ENST00000558440 PDCD7Q8N8D1 485 aaKnown RBP12.67□□□□□ -0.38
ZEB1-211ENST00000558440 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
ZEB1-211ENST00000558440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.64□□□□□ -0.39
ZEB1-211ENST00000558440 ILDR1Q86SU0 546 aaPredicted RBP12.64□□□□□ -0.39
ZEB1-211ENST00000558440 ZFP91Q96JP5 570 aaPredicted RBP12.64□□□□□ -0.39
ZEB1-211ENST00000558440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.391e-7■■■■■ 28.4
ZEB1-211ENST00000558440 SHROOM4Q9ULL8 1493 aa12.62□□□□□ -0.39
ZEB1-211ENST00000558440 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
ZEB1-211ENST00000558440 CC2D2AQ9P2K1 1620 aa12.59□□□□□ -0.39
ZEB1-211ENST00000558440 ST18O60284 1047 aa12.59□□□□□ -0.39
ZEB1-211ENST00000558440 RGL2O15211 777 aa12.58□□□□□ -0.4
ZEB1-211ENST00000558440 EFCAB3Q8N7B9 438 aa12.58□□□□□ -0.4
ZEB1-211ENST00000558440 ZCCHC6Q5VYS8 1495 aaKnown RBP12.56□□□□□ -0.4
ZEB1-211ENST00000558440 CECR2Q9BXF3 1484 aa12.56□□□□□ -0.4
ZEB1-211ENST00000558440 DCAF1Q9Y4B6 1507 aa12.56□□□□□ -0.4
ZEB1-211ENST00000558440 L3MBTL3Q96JM7 780 aaPredicted RBP12.55□□□□□ -0.4
ZEB1-211ENST00000558440 SCRIBQ14160 1630 aa12.55□□□□□ -0.4
ZEB1-211ENST00000558440 BCL11BQ9C0K0 894 aaPredicted RBP12.53□□□□□ -0.4
ZEB1-211ENST00000558440 DPY19L2Q6NUT2 758 aa12.51□□□□□ -0.41
ZEB1-211ENST00000558440 EIF4G1Q04637 1599 aaKnown RBP12.51□□□□□ -0.41
ZEB1-211ENST00000558440 SOX12O15370 315 aa12.5□□□□□ -0.41
ZEB1-211ENST00000558440 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.5□□□□□ -0.41
ZEB1-211ENST00000558440 STK25O00506 426 aa12.49□□□□□ -0.41
ZEB1-211ENST00000558440 STK24Q9Y6E0 443 aa12.49□□□□□ -0.41
ZEB1-211ENST00000558440 C3orf67Q6ZVT6 689 aa12.47□□□□□ -0.41
ZEB1-211ENST00000558440 SNPHO15079 494 aa12.45□□□□□ -0.42
ZEB1-211ENST00000558440 BOLA1Q9Y3E2 137 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms