RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-233	ENST00000557768	SPOCK2	Q92563	424 aa		12.08	□□□□□ -0.48
HNRNPC-233	ENST00000557768	DCAF8	Q5TAQ9	597 aa		12.06	□□□□□ -0.48
HNRNPC-233	ENST00000557768	ZNF579	Q8NAF0	562 aa	Known RBP	12.06	□□□□□ -0.48
HNRNPC-233	ENST00000557768	FAM212A	Q96EL1	285 aa		12.06	□□□□□ -0.48
HNRNPC-233	ENST00000557768	PHF12	Q96QT6	1004 aa		12.06	□□□□□ -0.48
HNRNPC-233	ENST00000557768	GABBR2	O75899	941 aa		12.02	□□□□□ -0.49
HNRNPC-233	ENST00000557768	CCDC61	Q9Y6R9	512 aa		12.02	□□□□□ -0.49
HNRNPC-233	ENST00000557768	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.97	□□□□□ -0.49
HNRNPC-233	ENST00000557768	GSE1	Q14687	1217 aa		11.96	□□□□□ -0.49
HNRNPC-233	ENST00000557768	GALR2	O43603	387 aa	Predicted RBP	11.92	□□□□□ -0.5
HNRNPC-233	ENST00000557768	CLCN6	P51797	869 aa		11.92	□□□□□ -0.5
HNRNPC-233	ENST00000557768	KIF12	Q96FN5	646 aa		11.92	□□□□□ -0.5
HNRNPC-233	ENST00000557768	PYGB	P11216	843 aa		11.91	□□□□□ -0.5
HNRNPC-233	ENST00000557768	MAP3K13	O43283	966 aa		11.9	□□□□□ -0.5
HNRNPC-233	ENST00000557768	MS4A3	Q96HJ5	214 aa		11.89	□□□□□ -0.51
HNRNPC-233	ENST00000557768	PCDHB13	Q9Y5F0	798 aa		11.85	□□□□□ -0.51
HNRNPC-233	ENST00000557768	DCBLD2	Q96PD2	775 aa		11.82	□□□□□ -0.52
HNRNPC-233	ENST00000557768	IFNL1	Q8IU54	200 aa		11.79	□□□□□ -0.52
HNRNPC-233	ENST00000557768	SGIP1	Q9BQI5	828 aa		11.78	□□□□□ -0.52
HNRNPC-233	ENST00000557768	CHRM1	P11229	460 aa	Predicted RBP	11.77	□□□□□ -0.53
HNRNPC-233	ENST00000557768	PCDHB8	Q9UN66	801 aa		11.77	□□□□□ -0.53
HNRNPC-233	ENST00000557768	TRPC6	Q9Y210	931 aa		11.77	□□□□□ -0.53
HNRNPC-233	ENST00000557768	POTEI	P0CG38	1075 aa		11.75	□□□□□ -0.53
HNRNPC-233	ENST00000557768	TRIM41	Q8WV44	630 aa		11.75	□□□□□ -0.53
HNRNPC-233	ENST00000557768	SLC24A1	O60721	1099 aa		11.74	□□□□□ -0.53
HNRNPC-233	ENST00000557768	RTN4	Q9NQC3	1192 aa	Known RBP	11.74	□□□□□ -0.53
HNRNPC-233	ENST00000557768	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.73	□□□□□ -0.53
HNRNPC-233	ENST00000557768	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.72	□□□□□ -0.53
HNRNPC-233	ENST00000557768	PKD2	Q13563	968 aa		11.71	□□□□□ -0.53
HNRNPC-233	ENST00000557768	ECM2	O94769	699 aa	Predicted RBP	11.7	□□□□□ -0.54
HNRNPC-233	ENST00000557768	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.69	□□□□□ -0.54
HNRNPC-233	ENST00000557768	RB1CC1	Q8TDY2	1594 aa		11.68	□□□□□ -0.54
HNRNPC-233	ENST00000557768	ATMIN	O43313	823 aa	Predicted RBP	11.68	□□□□□ -0.54
HNRNPC-233	ENST00000557768	TIE1	P35590	1138 aa		11.68	□□□□□ -0.54
HNRNPC-233	ENST00000557768	ATN1	P54259	1190 aa	Predicted RBP	11.66	□□□□□ -0.54
HNRNPC-233	ENST00000557768	ASTL	Q6HA08	431 aa	Predicted RBP	11.66	□□□□□ -0.54
HNRNPC-233	ENST00000557768	TMEM106C	Q9BVX2	250 aa		11.66	□□□□□ -0.54
HNRNPC-233	ENST00000557768	TTLL13P	A6NNM8	815 aa		11.65	□□□□□ -0.54
HNRNPC-233	ENST00000557768	PELP1	Q8IZL8	1130 aa	Known RBP	11.64	□□□□□ -0.55
HNRNPC-233	ENST00000557768	PSEN1	P49768	467 aa		11.62	□□□□□ -0.55
HNRNPC-233	ENST00000557768	RNF25	Q96BH1	459 aa	Predicted RBP	11.62	□□□□□ -0.55
HNRNPC-233	ENST00000557768	RIOK3	O14730	519 aa	Known RBP	11.61	□□□□□ -0.55
HNRNPC-233	ENST00000557768	PDAP1	Q13442	181 aa	Known RBP	11.6	□□□□□ -0.55
HNRNPC-233	ENST00000557768	TRIM35	Q9UPQ4	493 aa		11.59	□□□□□ -0.55
HNRNPC-233	ENST00000557768	RGL2	O15211	777 aa		11.58	□□□□□ -0.56
HNRNPC-233	ENST00000557768	NACAD	O15069	1562 aa		11.56	□□□□□ -0.56
HNRNPC-233	ENST00000557768	UNC13A	Q9UPW8	1703 aa		11.55	□□□□□ -0.56
HNRNPC-233	ENST00000557768	SLC39A7	Q92504	469 aa		11.54	□□□□□ -0.56
HNRNPC-233	ENST00000557768	VGF	O15240	615 aa	Predicted RBP	11.53	□□□□□ -0.56
HNRNPC-233	ENST00000557768	METRN	Q9UJH8	293 aa		11.53	□□□□□ -0.56
HNRNPC-233	ENST00000557768	C7	P10643	843 aa		11.52	□□□□□ -0.57
HNRNPC-233	ENST00000557768	GOLGA2	Q08379	1002 aa		11.52	□□□□□ -0.57
HNRNPC-233	ENST00000557768	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.51	□□□□□ -0.57
HNRNPC-233	ENST00000557768	ZFP91	Q96JP5	570 aa	Predicted RBP	11.51	□□□□□ -0.57
HNRNPC-233	ENST00000557768	TAOK2	Q9UL54	1235 aa		11.5	□□□□□ -0.57
HNRNPC-233	ENST00000557768	CABP2	Q9NPB3	220 aa		11.49	□□□□□ -0.57
HNRNPC-233	ENST00000557768	DCAF8L2	P0C7V8	631 aa		11.48	□□□□□ -0.57
HNRNPC-233	ENST00000557768	SEC24B	O95487	1268 aa		11.47	□□□□□ -0.57
HNRNPC-233	ENST00000557768	MKRN3	Q13064	507 aa	Known RBP	11.46	□□□□□ -0.57
HNRNPC-233	ENST00000557768	IER5L	Q5T953	404 aa		11.46	□□□□□ -0.57
HNRNPC-233	ENST00000557768	STK25	O00506	426 aa		11.44	□□□□□ -0.58
HNRNPC-233	ENST00000557768	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.44	□□□□□ -0.58
HNRNPC-233	ENST00000557768	LHX8	Q68G74	356 aa		11.43	□□□□□ -0.58
HNRNPC-233	ENST00000557768	COLQ	Q9Y215	455 aa	Predicted RBP	11.43	□□□□□ -0.58
HNRNPC-233	ENST00000557768	STK24	Q9Y6E0	443 aa		11.43	□□□□□ -0.58
HNRNPC-233	ENST00000557768	POTEF	A5A3E0	1075 aa		11.41	□□□□□ -0.58
HNRNPC-233	ENST00000557768	PLCG2	P16885	1265 aa		11.4	□□□□□ -0.58
HNRNPC-233	ENST00000557768	EFCAB3	Q8N7B9	438 aa		11.4	□□□□□ -0.58
HNRNPC-233	ENST00000557768	POTEB2	H3BUK9	544 aa		11.39	□□□□□ -0.59
HNRNPC-233	ENST00000557768	IRX5	P78411	483 aa	Predicted RBP	11.39	□□□□□ -0.59
HNRNPC-233	ENST00000557768	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.38	□□□□□ -0.59	2e-20	■□□□□ 8.3
HNRNPC-233	ENST00000557768	OCEL1	Q9H607	264 aa		11.37	□□□□□ -0.59
HNRNPC-233	ENST00000557768	BICRA	Q9NZM4	1560 aa		11.37	□□□□□ -0.59
HNRNPC-233	ENST00000557768	CHGA	P10645	457 aa	Known RBP	11.36	□□□□□ -0.59
HNRNPC-233	ENST00000557768	MYO15B	Q96JP2	1530 aa		11.31	□□□□□ -0.6
HNRNPC-233	ENST00000557768	PDCD7	Q8N8D1	485 aa	Known RBP	11.31	□□□□□ -0.6
HNRNPC-233	ENST00000557768	POTEJ	P0CG39	1038 aa		11.3	□□□□□ -0.6
HNRNPC-233	ENST00000557768	HS6ST3	Q8IZP7	471 aa		11.3	□□□□□ -0.6
HNRNPC-233	ENST00000557768	SOX12	O15370	315 aa		11.29	□□□□□ -0.6
HNRNPC-233	ENST00000557768	DPY19L2	Q6NUT2	758 aa		11.28	□□□□□ -0.6
HNRNPC-233	ENST00000557768	PHF8	Q9UPP1	1060 aa		11.28	□□□□□ -0.6
HNRNPC-233	ENST00000557768	ILDR1	Q86SU0	546 aa	Predicted RBP	11.26	□□□□□ -0.61
HNRNPC-233	ENST00000557768	NLRP6	P59044	892 aa		11.24	□□□□□ -0.61
HNRNPC-233	ENST00000557768	MAMSTR	Q6ZN01	415 aa		11.23	□□□□□ -0.61
HNRNPC-233	ENST00000557768	OTUD5	Q96G74	571 aa		11.23	□□□□□ -0.61
HNRNPC-233	ENST00000557768	MFRP	Q9BY79	579 aa		11.23	□□□□□ -0.61
HNRNPC-233	ENST00000557768	SCUBE2	Q9NQ36	999 aa		11.22	□□□□□ -0.61
HNRNPC-233	ENST00000557768	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.21	□□□□□ -0.61
HNRNPC-233	ENST00000557768	MS4A4A	Q96JQ5	239 aa		11.21	□□□□□ -0.61
HNRNPC-233	ENST00000557768		G3V3G9	751 aa		11.2	□□□□□ -0.62
HNRNPC-233	ENST00000557768	FBXO22	Q8NEZ5	403 aa		11.19	□□□□□ -0.62
HNRNPC-233	ENST00000557768	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.19	□□□□□ -0.62
HNRNPC-233	ENST00000557768	SCRIB	Q14160	1630 aa		11.17	□□□□□ -0.62
HNRNPC-233	ENST00000557768	NKX1-1	Q15270	411 aa	Predicted RBP	11.16	□□□□□ -0.62
HNRNPC-233	ENST00000557768	BOLA1	Q9Y3E2	137 aa		11.16	□□□□□ -0.62
HNRNPC-233	ENST00000557768	CC2D2A	Q9P2K1	1620 aa		11.16	□□□□□ -0.62
HNRNPC-233	ENST00000557768	DCAF1	Q9Y4B6	1507 aa		11.14	□□□□□ -0.63
HNRNPC-233	ENST00000557768	C3orf67	Q6ZVT6	689 aa		11.14	□□□□□ -0.63
HNRNPC-233	ENST00000557768	DNAJC5	Q9H3Z4	198 aa		11.13	□□□□□ -0.63
HNRNPC-233	ENST00000557768	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.13	□□□□□ -0.63

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