RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
FOXN3-218ENST00000557718 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
FOXN3-218ENST00000557718 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
FOXN3-218ENST00000557718 ZBTB47Q9UFB7 747 aaPredicted RBP12.03□□□□□ -0.48
FOXN3-218ENST00000557718 KIF12Q96FN5 646 aa12□□□□□ -0.49
FOXN3-218ENST00000557718 FBXO3Q9UK99 471 aa11.99□□□□□ -0.49
FOXN3-218ENST00000557718 NUBP1P53384 320 aa11.97□□□□□ -0.49
FOXN3-218ENST00000557718 PELP1Q8IZL8 1130 aaKnown RBP11.96□□□□□ -0.49
FOXN3-218ENST00000557718 ASTLQ6HA08 431 aaPredicted RBP11.95□□□□□ -0.5
FOXN3-218ENST00000557718 MAP3K13O43283 966 aa11.93□□□□□ -0.5
FOXN3-218ENST00000557718 ATMINO43313 823 aaPredicted RBP11.93□□□□□ -0.5
FOXN3-218ENST00000557718 FAM212AQ96EL1 285 aa11.88□□□□□ -0.51
FOXN3-218ENST00000557718 TRPC6Q9Y210 931 aa11.87□□□□□ -0.51
FOXN3-218ENST00000557718 ABCC9O60706 1549 aa11.86□□□□□ -0.51
FOXN3-218ENST00000557718 POTEB2H3BUK9 544 aa11.86□□□□□ -0.51
FOXN3-218ENST00000557718 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
FOXN3-218ENST00000557718 ZCCHC6Q5VYS8 1495 aaKnown RBP11.84□□□□□ -0.51
FOXN3-218ENST00000557718 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
FOXN3-218ENST00000557718 SLC39A7Q92504 469 aa11.84□□□□□ -0.51
FOXN3-218ENST00000557718 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
FOXN3-218ENST00000557718 METRNQ9UJH8 293 aa11.84□□□□□ -0.51
FOXN3-218ENST00000557718 C7P10643 843 aa11.83□□□□□ -0.52
FOXN3-218ENST00000557718 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
FOXN3-218ENST00000557718 TIE1P35590 1138 aa11.82□□□□□ -0.52
FOXN3-218ENST00000557718 PCDHB13Q9Y5F0 798 aa11.82□□□□□ -0.52
FOXN3-218ENST00000557718 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
FOXN3-218ENST00000557718 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
FOXN3-218ENST00000557718 OTUD5Q96G74 571 aa11.79□□□□□ -0.52
FOXN3-218ENST00000557718 TTLL13PA6NNM8 815 aa11.76□□□□□ -0.53
FOXN3-218ENST00000557718 IFNL1Q8IU54 200 aa11.76□□□□□ -0.53
FOXN3-218ENST00000557718 PYGBP11216 843 aa11.72□□□□□ -0.53
FOXN3-218ENST00000557718 POTEJP0CG39 1038 aa11.71□□□□□ -0.53
FOXN3-218ENST00000557718 POTEFA5A3E0 1075 aa11.69□□□□□ -0.54
FOXN3-218ENST00000557718 DCAF1Q9Y4B6 1507 aa11.69□□□□□ -0.54
FOXN3-218ENST00000557718 TRIM35Q9UPQ4 493 aa11.68□□□□□ -0.54
FOXN3-218ENST00000557718 GSE1Q14687 1217 aa11.67□□□□□ -0.54
FOXN3-218ENST00000557718 TMEM106CQ9BVX2 250 aa11.67□□□□□ -0.54
FOXN3-218ENST00000557718 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
FOXN3-218ENST00000557718 MAMSTRQ6ZN01 415 aa11.64□□□□□ -0.55
FOXN3-218ENST00000557718 COLQQ9Y215 455 aaPredicted RBP11.64□□□□□ -0.55
FOXN3-218ENST00000557718 SEC24BO95487 1268 aa11.63□□□□□ -0.55
FOXN3-218ENST00000557718 IER5LQ5T953 404 aa11.63□□□□□ -0.55
FOXN3-218ENST00000557718 PCDHB8Q9UN66 801 aa11.63□□□□□ -0.55
FOXN3-218ENST00000557718 MYO15BQ96JP2 1530 aa11.61□□□□□ -0.55
FOXN3-218ENST00000557718 NACADO15069 1562 aa11.6□□□□□ -0.55
FOXN3-218ENST00000557718 SPOCK2Q92563 424 aa11.6□□□□□ -0.55
FOXN3-218ENST00000557718 CHRM1P11229 460 aaPredicted RBP11.58□□□□□ -0.56
FOXN3-218ENST00000557718 SCUBE2Q9NQ36 999 aa11.58□□□□□ -0.56
FOXN3-218ENST00000557718 ZNF467Q7Z7K2 595 aaPredicted RBP11.55□□□□□ -0.56
FOXN3-218ENST00000557718 RB1CC1Q8TDY2 1594 aa11.54□□□□□ -0.56
FOXN3-218ENST00000557718 UNC13AQ9UPW8 1703 aa11.52□□□□□ -0.56
FOXN3-218ENST00000557718 CIZ1Q9ULV3 898 aaPredicted RBP11.52□□□□□ -0.57
FOXN3-218ENST00000557718 DCAF8L2P0C7V8 631 aa11.51□□□□□ -0.57
FOXN3-218ENST00000557718 IRX5P78411 483 aaPredicted RBP11.51□□□□□ -0.57
FOXN3-218ENST00000557718 PLCG2P16885 1265 aa11.5□□□□□ -0.57
FOXN3-218ENST00000557718 OCEL1Q9H607 264 aa11.46□□□□□ -0.57
FOXN3-218ENST00000557718 PSEN1P49768 467 aa11.45□□□□□ -0.58
FOXN3-218ENST00000557718 POTEMA6NI47 508 aa11.41□□□□□ -0.58
FOXN3-218ENST00000557718 PDAP1Q13442 181 aaKnown RBP11.41□□□□□ -0.58
FOXN3-218ENST00000557718 SCRIBQ14160 1630 aa11.41□□□□□ -0.58
FOXN3-218ENST00000557718 GOLGA2Q08379 1002 aa11.4□□□□□ -0.58
FOXN3-218ENST00000557718 MKRN3Q13064 507 aaKnown RBP11.39□□□□□ -0.59
FOXN3-218ENST00000557718 POTEGQ6S5H5 508 aa11.39□□□□□ -0.59
FOXN3-218ENST00000557718 FAM163AQ96GL9 167 aaPredicted RBP11.39□□□□□ -0.59
FOXN3-218ENST00000557718 LCE2DQ5TA82 110 aaPredicted RBP11.38□□□□□ -0.59
FOXN3-218ENST00000557718 SLAIN1Q8ND83 568 aa11.37□□□□□ -0.59
FOXN3-218ENST00000557718 PDCD7Q8N8D1 485 aaKnown RBP11.36□□□□□ -0.59
FOXN3-218ENST00000557718 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
FOXN3-218ENST00000557718 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.62e-6■□□□□ 10.4
FOXN3-218ENST00000557718 CABP2Q9NPB3 220 aa11.31□□□□□ -0.6
FOXN3-218ENST00000557718 BICRAQ9NZM4 1560 aa11.29□□□□□ -0.6
FOXN3-218ENST00000557718 ILDR1Q86SU0 546 aaPredicted RBP11.29□□□□□ -0.6
FOXN3-218ENST00000557718 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.28□□□□□ -0.6
FOXN3-218ENST00000557718 SHROOM4Q9ULL8 1493 aa11.27□□□□□ -0.6
FOXN3-218ENST00000557718 L3MBTL3Q96JM7 780 aaPredicted RBP11.27□□□□□ -0.61
FOXN3-218ENST00000557718 RNF25Q96BH1 459 aaPredicted RBP11.24□□□□□ -0.61
FOXN3-218ENST00000557718 PLSCR2Q9NRY7 297 aa11.24□□□□□ -0.61
FOXN3-218ENST00000557718 DPY19L2Q6NUT2 758 aa11.23□□□□□ -0.61
FOXN3-218ENST00000557718 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
FOXN3-218ENST00000557718 RIOK3O14730 519 aaKnown RBP11.22□□□□□ -0.61
FOXN3-218ENST00000557718 PCDH10Q9P2E7 1040 aa11.22□□□□□ -0.61
FOXN3-218ENST00000557718 ST18O60284 1047 aa11.2□□□□□ -0.62
FOXN3-218ENST00000557718 EFCAB3Q8N7B9 438 aa11.19□□□□□ -0.62
FOXN3-218ENST00000557718 SNPHO15079 494 aa11.17□□□□□ -0.62
FOXN3-218ENST00000557718 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.16□□□□□ -0.62
FOXN3-218ENST00000557718 VGFO15240 615 aaPredicted RBP11.16□□□□□ -0.62
FOXN3-218ENST00000557718 ZFP91Q96JP5 570 aaPredicted RBP11.16□□□□□ -0.62
FOXN3-218ENST00000557718 BOLA1Q9Y3E2 137 aa11.15□□□□□ -0.62
FOXN3-218ENST00000557718 G3V3G9 751 aa11.13□□□□□ -0.63
FOXN3-218ENST00000557718 TMEM121BQ9BXQ6 578 aaPredicted RBP11.1□□□□□ -0.63
FOXN3-218ENST00000557718 SOX12O15370 315 aa11.09□□□□□ -0.63
FOXN3-218ENST00000557718 ECM2O94769 699 aaPredicted RBP11.07□□□□□ -0.64
FOXN3-218ENST00000557718 CDAN1Q8IWY9 1227 aa11.07□□□□□ -0.64
FOXN3-218ENST00000557718 TAOK2Q9UL54 1235 aa11.06□□□□□ -0.64
FOXN3-218ENST00000557718 PHF8Q9UPP1 1060 aa11.05□□□□□ -0.64
FOXN3-218ENST00000557718 PKD2Q13563 968 aa11.04□□□□□ -0.64
FOXN3-218ENST00000557718 MARVELD3Q96A59 401 aa11.04□□□□□ -0.64
FOXN3-218ENST00000557718 MS4A4AQ96JQ5 239 aa11.04□□□□□ -0.64
FOXN3-218ENST00000557718 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
FOXN3-218ENST00000557718 MICALL2Q8IY33 904 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms