RNA–Protein interactions for RNA: ENST00000557684.5

CASC1-213, Transcript of cancer susceptibility 1, humanhuman

TSL 2

Gene CASC1, Length 1,626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-213ENST00000557684 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.77□□□□□ -0.53
CASC1-213ENST00000557684 C1orf115Q9H7X2 142 aa11.77□□□□□ -0.53
CASC1-213ENST00000557684 ARID3AQ99856 593 aa11.76□□□□□ -0.53
CASC1-213ENST00000557684 NECTIN2Q92692 538 aa11.73□□□□□ -0.53
CASC1-213ENST00000557684 MKRN4PQ13434 485 aaPredicted RBP11.72□□□□□ -0.53
CASC1-213ENST00000557684 HS6ST3Q8IZP7 471 aa11.72□□□□□ -0.53
CASC1-213ENST00000557684 ZBTB7CA1YPR0 619 aa11.71□□□□□ -0.53
CASC1-213ENST00000557684 NKX1-1Q15270 411 aaPredicted RBP11.66□□□□□ -0.54
CASC1-213ENST00000557684 IGSF3O75054 1194 aa11.65□□□□□ -0.54
CASC1-213ENST00000557684 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
CASC1-213ENST00000557684 GTPBP6O43824 516 aaPredicted RBP11.63□□□□□ -0.55
CASC1-213ENST00000557684 PDIA4P13667 645 aaKnown RBP11.63□□□□□ -0.55
CASC1-213ENST00000557684 U3KPZ7 1027 aaPredicted RBP11.61□□□□□ -0.55
CASC1-213ENST00000557684 SAMD1Q6SPF0 538 aaPredicted RBP11.6□□□□□ -0.55
CASC1-213ENST00000557684 SHROOM4Q9ULL8 1493 aa11.59□□□□□ -0.55
CASC1-213ENST00000557684 SLC24A3Q9HC58 644 aa11.59□□□□□ -0.55
CASC1-213ENST00000557684 ZC3H15Q8WU90 426 aaKnown RBP11.58□□□□□ -0.56
CASC1-213ENST00000557684 P3H3Q8IVL6 736 aa11.57□□□□□ -0.56
CASC1-213ENST00000557684 ARID3CA6NKF2 412 aa11.53□□□□□ -0.56
CASC1-213ENST00000557684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.51□□□□□ -0.57
CASC1-213ENST00000557684 HNRNPUL2Q1KMD3 747 aaKnown RBP11.51□□□□□ -0.57
CASC1-213ENST00000557684 KCNV2Q8TDN2 545 aa11.5□□□□□ -0.57
CASC1-213ENST00000557684 APBB1O00213 710 aa11.46□□□□□ -0.57
CASC1-213ENST00000557684 RNF25Q96BH1 459 aaPredicted RBP11.46□□□□□ -0.57
CASC1-213ENST00000557684 KCTD17Q8N5Z5 321 aa11.46□□□□□ -0.58
CASC1-213ENST00000557684 CIZ1Q9ULV3 898 aaPredicted RBP11.45□□□□□ -0.58
CASC1-213ENST00000557684 RGS22Q8NE09 1264 aa11.43□□□□□ -0.58
CASC1-213ENST00000557684 SPINK5Q9NQ38 1064 aaPredicted RBP11.41□□□□□ -0.58
CASC1-213ENST00000557684 RAD21O60216 631 aa11.4□□□□□ -0.58
CASC1-213ENST00000557684 CDK11BP21127 795 aaKnown RBP11.39□□□□□ -0.59
CASC1-213ENST00000557684 CDK11AQ9UQ88 783 aaPredicted RBP11.39□□□□□ -0.59
CASC1-213ENST00000557684 CAPN15O75808 1086 aa11.38□□□□□ -0.59
CASC1-213ENST00000557684 HSP90B1P14625 803 aaKnown RBP11.36□□□□□ -0.59
CASC1-213ENST00000557684 DSG3P32926 999 aa11.36□□□□□ -0.59
CASC1-213ENST00000557684 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
CASC1-213ENST00000557684 HMGB1P09429 215 aaKnown RBP11.35□□□□□ -0.59
CASC1-213ENST00000557684 PLCD3Q8N3E9 789 aa11.35□□□□□ -0.59
CASC1-213ENST00000557684 ZMYND10O75800 440 aa11.34□□□□□ -0.59
CASC1-213ENST00000557684 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
CASC1-213ENST00000557684 GPBP1L1Q9HC44 474 aaPredicted RBP11.34□□□□□ -0.59
CASC1-213ENST00000557684 IL27Q8NEV9 243 aa11.33□□□□□ -0.6
CASC1-213ENST00000557684 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
CASC1-213ENST00000557684 MTMR7Q9Y216 660 aa11.33□□□□□ -0.6
CASC1-213ENST00000557684 CCDC82Q8N4S0 544 aa11.31□□□□□ -0.6
CASC1-213ENST00000557684 ZNF428Q96B54 188 aa11.31□□□□□ -0.6
CASC1-213ENST00000557684 PUS7Q96PZ0 661 aaKnown RBP11.31□□□□□ -0.6
CASC1-213ENST00000557684 TRAIPQ9BWF2 469 aa11.31□□□□□ -0.6
CASC1-213ENST00000557684 CHMP4AQ9BY43 222 aa11.29□□□□□ -0.6
CASC1-213ENST00000557684 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
CASC1-213ENST00000557684 FOXD4L5Q5VV16 416 aaPredicted RBP11.24□□□□□ -0.61
CASC1-213ENST00000557684 CADPS2Q86UW7 1296 aa11.24□□□□□ -0.61
CASC1-213ENST00000557684 FOXD4L4Q8WXT5 416 aaPredicted RBP11.24□□□□□ -0.61
CASC1-213ENST00000557684 RBM25P49756 843 aaKnown RBP11.23□□□□□ -0.61
CASC1-213ENST00000557684 POLA2Q14181 598 aa11.22□□□□□ -0.61
CASC1-213ENST00000557684 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
CASC1-213ENST00000557684 MIER1Q8N108 512 aa11.2□□□□□ -0.62
CASC1-213ENST00000557684 WDR70Q9NW82 654 aa11.2□□□□□ -0.62
CASC1-213ENST00000557684 MFAP1P55081 439 aaKnown RBP11.2□□□□□ -0.62
CASC1-213ENST00000557684 BARGINQ6ZT62 677 aa11.2□□□□□ -0.62
CASC1-213ENST00000557684 AEBP1Q8IUX7 1158 aa11.2□□□□□ -0.62
CASC1-213ENST00000557684 KDM4CQ9H3R0 1056 aa11.2□□□□□ -0.62
CASC1-213ENST00000557684 STK25O00506 426 aa11.19□□□□□ -0.62
CASC1-213ENST00000557684 TMCO4Q5TGY1 634 aa11.19□□□□□ -0.62
CASC1-213ENST00000557684 RIOK3O14730 519 aaKnown RBP11.18□□□□□ -0.62
CASC1-213ENST00000557684 SEMA3EO15041 775 aa11.18□□□□□ -0.62
CASC1-213ENST00000557684 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
CASC1-213ENST00000557684 AK7Q96M32 723 aa11.13□□□□□ -0.63
CASC1-213ENST00000557684 TRAK2O60296 914 aa11.13□□□□□ -0.63
CASC1-213ENST00000557684 RYDENQ9NUL5 291 aaKnown RBP11.13□□□□□ -0.63
CASC1-213ENST00000557684 FLIIQ13045 1269 aa11.12□□□□□ -0.63
CASC1-213ENST00000557684 GZF1Q9H116 711 aaPredicted RBP11.11□□□□□ -0.63
CASC1-213ENST00000557684 ONECUT3O60422 494 aaPredicted RBP11.1□□□□□ -0.63
CASC1-213ENST00000557684 A6NJR5 290 aa11.09□□□□□ -0.63
CASC1-213ENST00000557684 ABCB7O75027 752 aa11.09□□□□□ -0.63
CASC1-213ENST00000557684 CLUAP1Q96AJ1 413 aa11.09□□□□□ -0.63
CASC1-213ENST00000557684 E9PSI1 815 aa11.06□□□□□ -0.64
CASC1-213ENST00000557684 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
CASC1-213ENST00000557684 FAM117AQ9C073 453 aa11.02□□□□□ -0.64
CASC1-213ENST00000557684 BCL11BQ9C0K0 894 aaPredicted RBP11.02□□□□□ -0.64
CASC1-213ENST00000557684 ZBTB47Q9UFB7 747 aaPredicted RBP11.02□□□□□ -0.64
CASC1-213ENST00000557684 PDE4DQ08499 809 aa11.02□□□□□ -0.65
CASC1-213ENST00000557684 IRF5Q13568 498 aa11.02□□□□□ -0.65
CASC1-213ENST00000557684 RETREG2Q8NC44 543 aa11.01□□□□□ -0.65
CASC1-213ENST00000557684 STK24Q9Y6E0 443 aa11.01□□□□□ -0.65
CASC1-213ENST00000557684 TRIM66O15016 1216 aa11□□□□□ -0.65
CASC1-213ENST00000557684 GSE1Q14687 1217 aa11□□□□□ -0.65
CASC1-213ENST00000557684 ZNF316A6NFI3 1004 aaPredicted RBP10.99□□□□□ -0.65
CASC1-213ENST00000557684 PLEKHG3A1L390 1219 aa10.98□□□□□ -0.65
CASC1-213ENST00000557684 SGIP1Q9BQI5 828 aa10.98□□□□□ -0.65
CASC1-213ENST00000557684 USP35Q9P2H5 1018 aa10.98□□□□□ -0.65
CASC1-213ENST00000557684 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.96□□□□□ -0.65
CASC1-213ENST00000557684 ZFP91Q96JP5 570 aaPredicted RBP10.96□□□□□ -0.65
CASC1-213ENST00000557684 E2F4Q16254 413 aa10.95□□□□□ -0.66
CASC1-213ENST00000557684 ZNF777Q9ULD5 760 aaPredicted RBP10.94□□□□□ -0.66
CASC1-213ENST00000557684 DHX37Q8IY37 1157 aaKnown RBP10.93□□□□□ -0.66
CASC1-213ENST00000557684 FAM177A1Q8N128 213 aaPredicted RBP10.92□□□□□ -0.66
CASC1-213ENST00000557684 KRI1Q8N9T8 703 aaKnown RBP10.91□□□□□ -0.66
CASC1-213ENST00000557684 SERPINA10Q9UK55 444 aa10.91□□□□□ -0.66
CASC1-213ENST00000557684 SMYD5Q6GMV2 418 aa10.91□□□□□ -0.66
CASC1-213ENST00000557684 FBXW7Q969H0 707 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms