RNA–Protein interactions for RNA: ENST00000557473.1

PRKCH-224, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-224ENST00000557473 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
PRKCH-224ENST00000557473 ZCCHC6Q5VYS8 1495 aaKnown RBP12.27□□□□□ -0.45
PRKCH-224ENST00000557473 DCAF1Q9Y4B6 1507 aa12.27□□□□□ -0.45
PRKCH-224ENST00000557473 TSPYL2Q9H2G4 693 aaPredicted RBP12.26□□□□□ -0.45
PRKCH-224ENST00000557473 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
PRKCH-224ENST00000557473 SHROOM4Q9ULL8 1493 aa12.21□□□□□ -0.45
PRKCH-224ENST00000557473 POTEIP0CG38 1075 aa12.2□□□□□ -0.46
PRKCH-224ENST00000557473 DCBLD2Q96PD2 775 aa12.19□□□□□ -0.46
PRKCH-224ENST00000557473 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
PRKCH-224ENST00000557473 CLCN6P51797 869 aa12.15□□□□□ -0.46
PRKCH-224ENST00000557473 MS4A3Q96HJ5 214 aa12.11□□□□□ -0.47
PRKCH-224ENST00000557473 FBXO3Q9UK99 471 aa12.11□□□□□ -0.47
PRKCH-224ENST00000557473 CCDC61Q9Y6R9 512 aa12.1□□□□□ -0.47
PRKCH-224ENST00000557473 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
PRKCH-224ENST00000557473 SCRIBQ14160 1630 aa12.06□□□□□ -0.48
PRKCH-224ENST00000557473 VASPP50552 380 aaPredicted RBP12.03□□□□□ -0.48
PRKCH-224ENST00000557473 NUBP1P53384 320 aa12.03□□□□□ -0.48
PRKCH-224ENST00000557473 LHX8Q68G74 356 aa12.03□□□□□ -0.48
PRKCH-224ENST00000557473 KIF12Q96FN5 646 aa12.01□□□□□ -0.49
PRKCH-224ENST00000557473 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
PRKCH-224ENST00000557473 MAP3K13O43283 966 aa12□□□□□ -0.49
PRKCH-224ENST00000557473 KLHL34Q8N239 644 aa12□□□□□ -0.49
PRKCH-224ENST00000557473 EIF4G1Q04637 1599 aaKnown RBP12□□□□□ -0.49
PRKCH-224ENST00000557473 CECR2Q9BXF3 1484 aa11.98□□□□□ -0.49
PRKCH-224ENST00000557473 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
PRKCH-224ENST00000557473 PELP1Q8IZL8 1130 aaKnown RBP11.96□□□□□ -0.49
PRKCH-224ENST00000557473 TRPC6Q9Y210 931 aa11.96□□□□□ -0.49
PRKCH-224ENST00000557473 DCAF8Q5TAQ9 597 aa11.93□□□□□ -0.5
PRKCH-224ENST00000557473 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
PRKCH-224ENST00000557473 PCDHB13Q9Y5F0 798 aa11.91□□□□□ -0.5
PRKCH-224ENST00000557473 ASTLQ6HA08 431 aaPredicted RBP11.9□□□□□ -0.5
PRKCH-224ENST00000557473 ATN1P54259 1190 aaPredicted RBP11.88□□□□□ -0.51
PRKCH-224ENST00000557473 BMP2KQ9NSY1 1161 aaPredicted RBP11.88□□□□□ -0.51
PRKCH-224ENST00000557473 PYGBP11216 843 aa11.87□□□□□ -0.51
PRKCH-224ENST00000557473 METRNQ9UJH8 293 aa11.86□□□□□ -0.51
PRKCH-224ENST00000557473 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
PRKCH-224ENST00000557473 IFNLR1Q8IU57 520 aaPredicted RBP11.83□□□□□ -0.52
PRKCH-224ENST00000557473 POTEB2H3BUK9 544 aa11.82□□□□□ -0.52
PRKCH-224ENST00000557473 SLC39A7Q92504 469 aa11.81□□□□□ -0.52
PRKCH-224ENST00000557473 TIE1P35590 1138 aa11.8□□□□□ -0.52
PRKCH-224ENST00000557473 TTLL13PA6NNM8 815 aa11.79□□□□□ -0.52
PRKCH-224ENST00000557473 C7P10643 843 aa11.77□□□□□ -0.53
PRKCH-224ENST00000557473 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.53
PRKCH-224ENST00000557473 PCDHB8Q9UN66 801 aa11.76□□□□□ -0.53
PRKCH-224ENST00000557473 GSE1Q14687 1217 aa11.75□□□□□ -0.53
PRKCH-224ENST00000557473 SPOCK2Q92563 424 aa11.75□□□□□ -0.53
PRKCH-224ENST00000557473 CIZ1Q9ULV3 898 aaPredicted RBP11.75□□□□□ -0.53
PRKCH-224ENST00000557473 TMEM106CQ9BVX2 250 aa11.74□□□□□ -0.53
PRKCH-224ENST00000557473 TRIM35Q9UPQ4 493 aa11.74□□□□□ -0.53
PRKCH-224ENST00000557473 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
PRKCH-224ENST00000557473 SEC24BO95487 1268 aa11.69□□□□□ -0.54
PRKCH-224ENST00000557473 POTEFA5A3E0 1075 aa11.68□□□□□ -0.54
PRKCH-224ENST00000557473 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
PRKCH-224ENST00000557473 COLQQ9Y215 455 aaPredicted RBP11.68□□□□□ -0.54
PRKCH-224ENST00000557473 NCAPD3P42695 1498 aa11.62□□□□□ -0.55
PRKCH-224ENST00000557473 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
PRKCH-224ENST00000557473 IER5LQ5T953 404 aa11.58□□□□□ -0.56
PRKCH-224ENST00000557473 CHRM1P11229 460 aaPredicted RBP11.57□□□□□ -0.56
PRKCH-224ENST00000557473 PLCG2P16885 1265 aa11.56□□□□□ -0.56
PRKCH-224ENST00000557473 PSEN1P49768 467 aa11.56□□□□□ -0.56
PRKCH-224ENST00000557473 SCUBE2Q9NQ36 999 aa11.56□□□□□ -0.56
PRKCH-224ENST00000557473 ATAD2BQ9ULI0 1458 aa11.56□□□□□ -0.56
PRKCH-224ENST00000557473 HMGXB3Q12766 1538 aa11.55□□□□□ -0.56
PRKCH-224ENST00000557473 MAMSTRQ6ZN01 415 aa11.55□□□□□ -0.56
PRKCH-224ENST00000557473 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
PRKCH-224ENST00000557473 SMARCA4P51532 1647 aa11.53□□□□□ -0.56
PRKCH-224ENST00000557473 GOLGA2Q08379 1002 aa11.53□□□□□ -0.56
PRKCH-224ENST00000557473 CUX2O14529 1486 aa11.52□□□□□ -0.56
PRKCH-224ENST00000557473 IRX5P78411 483 aaPredicted RBP11.51□□□□□ -0.57
PRKCH-224ENST00000557473 DNAJC5Q9H3Z4 198 aa11.5□□□□□ -0.57
PRKCH-224ENST00000557473 PDAP1Q13442 181 aaKnown RBP11.49□□□□□ -0.57
PRKCH-224ENST00000557473 BAZ1AQ9NRL2 1556 aaPredicted RBP11.49□□□□□ -0.57
PRKCH-224ENST00000557473 PEG3Q9GZU2 1588 aa11.47□□□□□ -0.57
PRKCH-224ENST00000557473 ERCC6Q03468 1493 aa11.47□□□□□ -0.57
PRKCH-224ENST00000557473 MKRN3Q13064 507 aaKnown RBP11.47□□□□□ -0.57
PRKCH-224ENST00000557473 OCEL1Q9H607 264 aa11.47□□□□□ -0.57
PRKCH-224ENST00000557473 CABP2Q9NPB3 220 aa11.46□□□□□ -0.57
PRKCH-224ENST00000557473 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
PRKCH-224ENST00000557473 TRIM41Q8WV44 630 aa11.42□□□□□ -0.58
PRKCH-224ENST00000557473 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.41□□□□□ -0.58
PRKCH-224ENST00000557473 SLAIN1Q8ND83 568 aa11.4□□□□□ -0.58
PRKCH-224ENST00000557473 RNF25Q96BH1 459 aaPredicted RBP11.4□□□□□ -0.58
PRKCH-224ENST00000557473 FAM163AQ96GL9 167 aaPredicted RBP11.4□□□□□ -0.58
PRKCH-224ENST00000557473 PDCD7Q8N8D1 485 aaKnown RBP11.39□□□□□ -0.59
PRKCH-224ENST00000557473 NESP48681 1621 aa11.38□□□□□ -0.59
PRKCH-224ENST00000557473 MROH2BQ7Z745 1585 aa11.37□□□□□ -0.59
PRKCH-224ENST00000557473 LAMC3Q9Y6N6 1575 aa11.37□□□□□ -0.59
PRKCH-224ENST00000557473 RIOK3O14730 519 aaKnown RBP11.36□□□□□ -0.59
PRKCH-224ENST00000557473 POTEMA6NI47 508 aa11.35□□□□□ -0.59
PRKCH-224ENST00000557473 THOC2Q8NI27 1593 aaKnown RBP11.34□□□□□ -0.59
PRKCH-224ENST00000557473 DPY19L2Q6NUT2 758 aa11.33□□□□□ -0.6
PRKCH-224ENST00000557473 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.32□□□□□ -0.6
PRKCH-224ENST00000557473 POTEGQ6S5H5 508 aa11.32□□□□□ -0.6
PRKCH-224ENST00000557473 EFCAB3Q8N7B9 438 aa11.32□□□□□ -0.6
PRKCH-224ENST00000557473 ZFP91Q96JP5 570 aaPredicted RBP11.32□□□□□ -0.6
PRKCH-224ENST00000557473 LCE2DQ5TA82 110 aaPredicted RBP11.31□□□□□ -0.6
PRKCH-224ENST00000557473 C3orf67Q6ZVT6 689 aa11.31□□□□□ -0.6
PRKCH-224ENST00000557473 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.31□□□□□ -0.6
PRKCH-224ENST00000557473 ECM2O94769 699 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-224ENST00000557473 VGFO15240 615 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms