RNA–Protein interactions for RNA: ENST00000556938.1

SLC38A6-220, Transcript of solute carrier family 38 member 6, humanhuman

TSL 4

Gene SLC38A6, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-220ENST00000556938 POTEMA6NI47 508 aa13.41□□□□□ -0.26
SLC38A6-220ENST00000556938 POTEJP0CG39 1038 aa13.4□□□□□ -0.26
SLC38A6-220ENST00000556938 FKBP8Q14318 412 aa13.39□□□□□ -0.27
SLC38A6-220ENST00000556938 TSPYL2Q9H2G4 693 aaPredicted RBP13.38□□□□□ -0.27
SLC38A6-220ENST00000556938 POTEGQ6S5H5 508 aa13.37□□□□□ -0.27
SLC38A6-220ENST00000556938 SLC39A7Q92504 469 aa13.36□□□□□ -0.27
SLC38A6-220ENST00000556938 C7P10643 843 aa13.34□□□□□ -0.27
SLC38A6-220ENST00000556938 PROM2Q8N271 834 aa13.33□□□□□ -0.28
SLC38A6-220ENST00000556938 CCDC61Q9Y6R9 512 aa13.32□□□□□ -0.28
SLC38A6-220ENST00000556938 ATN1P54259 1190 aaPredicted RBP13.3□□□□□ -0.28
SLC38A6-220ENST00000556938 KIF12Q96FN5 646 aa13.26□□□□□ -0.29
SLC38A6-220ENST00000556938 TRPC6Q9Y210 931 aa13.25□□□□□ -0.29
SLC38A6-220ENST00000556938 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
SLC38A6-220ENST00000556938 POTEFA5A3E0 1075 aa13.21□□□□□ -0.29
SLC38A6-220ENST00000556938 LCE2DQ5TA82 110 aaPredicted RBP13.21□□□□□ -0.29
SLC38A6-220ENST00000556938 BMP2KQ9NSY1 1161 aaPredicted RBP13.21□□□□□ -0.29
SLC38A6-220ENST00000556938 MAP3K13O43283 966 aa13.18□□□□□ -0.3
SLC38A6-220ENST00000556938 RASEFQ8IZ41 740 aa13.16□□□□□ -0.3
SLC38A6-220ENST00000556938 FAM163AQ96GL9 167 aaPredicted RBP13.16□□□□□ -0.3
SLC38A6-220ENST00000556938 SCUBE2Q9NQ36 999 aa13.16□□□□□ -0.3
SLC38A6-220ENST00000556938 MIER1Q8N108 512 aa13.13□□□□□ -0.31
SLC38A6-220ENST00000556938 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
SLC38A6-220ENST00000556938 TIE1P35590 1138 aa13.11□□□□□ -0.31
SLC38A6-220ENST00000556938 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
SLC38A6-220ENST00000556938 COLQQ9Y215 455 aaPredicted RBP13.08□□□□□ -0.32
SLC38A6-220ENST00000556938 TTLL13PA6NNM8 815 aa13.07□□□□□ -0.32
SLC38A6-220ENST00000556938 SEC24BO95487 1268 aa13.01□□□□□ -0.33
SLC38A6-220ENST00000556938 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
SLC38A6-220ENST00000556938 PLCD3Q8N3E9 789 aa12.97□□□□□ -0.33
SLC38A6-220ENST00000556938 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
SLC38A6-220ENST00000556938 NUBP1P53384 320 aa12.94□□□□□ -0.34
SLC38A6-220ENST00000556938 SGIP1Q9BQI5 828 aa12.93□□□□□ -0.34
SLC38A6-220ENST00000556938 IER5LQ5T953 404 aa12.92□□□□□ -0.34
SLC38A6-220ENST00000556938 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
SLC38A6-220ENST00000556938 IFNL1Q8IU54 200 aa12.91□□□□□ -0.34
SLC38A6-220ENST00000556938 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
SLC38A6-220ENST00000556938 SLAIN1Q8ND83 568 aa12.85□□□□□ -0.35
SLC38A6-220ENST00000556938 TMEM106CQ9BVX2 250 aa12.85□□□□□ -0.35
SLC38A6-220ENST00000556938 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
SLC38A6-220ENST00000556938 ST18O60284 1047 aa12.81□□□□□ -0.36
SLC38A6-220ENST00000556938 FAM212AQ96EL1 285 aa12.81□□□□□ -0.36
SLC38A6-220ENST00000556938 VASPP50552 380 aaPredicted RBP12.8□□□□□ -0.36
SLC38A6-220ENST00000556938 PLCG2P16885 1265 aa12.78□□□□□ -0.36
SLC38A6-220ENST00000556938 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
SLC38A6-220ENST00000556938 PYGBP11216 843 aa12.71□□□□□ -0.37
SLC38A6-220ENST00000556938 DCAF8Q5TAQ9 597 aa12.68□□□□□ -0.38
SLC38A6-220ENST00000556938 OCEL1Q9H607 264 aa12.67□□□□□ -0.38
SLC38A6-220ENST00000556938 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
SLC38A6-220ENST00000556938 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
SLC38A6-220ENST00000556938 IFNLR1Q8IU57 520 aaPredicted RBP12.63□□□□□ -0.39
SLC38A6-220ENST00000556938 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.6□□□□□ -0.39
SLC38A6-220ENST00000556938 MARVELD3Q96A59 401 aa12.58□□□□□ -0.4
SLC38A6-220ENST00000556938 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
SLC38A6-220ENST00000556938 MMRN1Q13201 1228 aa12.56□□□□□ -0.4
SLC38A6-220ENST00000556938 SPNS2Q8IVW8 549 aa12.56□□□□□ -0.4
SLC38A6-220ENST00000556938 SNPHO15079 494 aa12.54□□□□□ -0.4
SLC38A6-220ENST00000556938 PDCD7Q8N8D1 485 aaKnown RBP12.54□□□□□ -0.4
SLC38A6-220ENST00000556938 SPOCK2Q92563 424 aa12.49□□□□□ -0.41
SLC38A6-220ENST00000556938 C3orf67Q6ZVT6 689 aa12.46□□□□□ -0.41
SLC38A6-220ENST00000556938 MKRN3Q13064 507 aaKnown RBP12.44□□□□□ -0.42
SLC38A6-220ENST00000556938 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
SLC38A6-220ENST00000556938 GOLGA2Q08379 1002 aa12.42□□□□□ -0.42
SLC38A6-220ENST00000556938 GSE1Q14687 1217 aa12.42□□□□□ -0.42
SLC38A6-220ENST00000556938 POTEB3A0JP26 581 aa12.41□□□□□ -0.42
SLC38A6-220ENST00000556938 EMP3P54852 163 aa12.41□□□□□ -0.42
SLC38A6-220ENST00000556938 POTEBQ6S5H4 581 aa12.41□□□□□ -0.42
SLC38A6-220ENST00000556938 L3MBTL3Q96JM7 780 aaPredicted RBP12.41□□□□□ -0.42
SLC38A6-220ENST00000556938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.42
SLC38A6-220ENST00000556938 PSEN1P49768 467 aa12.39□□□□□ -0.43
SLC38A6-220ENST00000556938 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
SLC38A6-220ENST00000556938 HS3ST6Q96QI5 342 aa12.36□□□□□ -0.43
SLC38A6-220ENST00000556938 KRTAP3-3Q9BYR6 98 aa12.36□□□□□ -0.43
SLC38A6-220ENST00000556938 KRTAP3-2Q9BYR7 98 aa12.36□□□□□ -0.43
SLC38A6-220ENST00000556938 CIZ1Q9ULV3 898 aaPredicted RBP12.36□□□□□ -0.43
SLC38A6-220ENST00000556938 FAM205CA6NFA0 338 aa12.35□□□□□ -0.43
SLC38A6-220ENST00000556938 DPY19L2Q6NUT2 758 aa12.35□□□□□ -0.43
SLC38A6-220ENST00000556938 ILDR1Q86SU0 546 aaPredicted RBP12.32□□□□□ -0.44
SLC38A6-220ENST00000556938 PDAP1Q13442 181 aaKnown RBP12.27□□□□□ -0.45
SLC38A6-220ENST00000556938 CABP2Q9NPB3 220 aa12.26□□□□□ -0.45
SLC38A6-220ENST00000556938 HOXB3P14651 431 aaPredicted RBP12.25□□□□□ -0.45
SLC38A6-220ENST00000556938 BOLA1Q9Y3E2 137 aa12.23□□□□□ -0.45
SLC38A6-220ENST00000556938 G3V3G9 751 aa12.17□□□□□ -0.46
SLC38A6-220ENST00000556938 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
SLC38A6-220ENST00000556938 HOXB1P14653 301 aaPredicted RBP12.15□□□□□ -0.46
SLC38A6-220ENST00000556938 ZNF710Q8N1W2 664 aa12.13□□□□□ -0.47
SLC38A6-220ENST00000556938 PKD2Q13563 968 aa12.11□□□□□ -0.47
SLC38A6-220ENST00000556938 ERBB3P21860 1342 aa12.11□□□□□ -0.47
SLC38A6-220ENST00000556938 DOK7Q18PE1 504 aa12.09□□□□□ -0.47
SLC38A6-220ENST00000556938 EFCAB3Q8N7B9 438 aa12.08□□□□□ -0.48
SLC38A6-220ENST00000556938 RNF25Q96BH1 459 aaPredicted RBP12.07□□□□□ -0.48
SLC38A6-220ENST00000556938 ECM2O94769 699 aaPredicted RBP12.06□□□□□ -0.48
SLC38A6-220ENST00000556938 VARS2Q5ST30 1063 aaKnown RBP12.04□□□□□ -0.48
SLC38A6-220ENST00000556938 TMEM92Q6UXU6 159 aa12.03□□□□□ -0.48
SLC38A6-220ENST00000556938 RIOK3O14730 519 aaKnown RBP12.01□□□□□ -0.49
SLC38A6-220ENST00000556938 RNF166Q96A37 237 aaPredicted RBP12.01□□□□□ -0.49
SLC38A6-220ENST00000556938 MICALL2Q8IY33 904 aa12□□□□□ -0.49
SLC38A6-220ENST00000556938 RIMBP2O15034 1052 aa11.99□□□□□ -0.49
SLC38A6-220ENST00000556938 RGL2O15211 777 aa11.97□□□□□ -0.49
SLC38A6-220ENST00000556938 GPR153Q6NV75 609 aa11.94□□□□□ -0.5
SLC38A6-220ENST00000556938 ZNF687Q8N1G0 1237 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms