RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 PHF12Q96QT6 1004 aa10.23□□□□□ -0.77
ATXN3-244ENST00000556898 CECR2Q9BXF3 1484 aa10.22□□□□□ -0.77
ATXN3-244ENST00000556898 NPM1P06748 294 aaKnown RBP eCLIP10.17□□□□□ -0.78
ATXN3-244ENST00000556898 DCAF1Q9Y4B6 1507 aa10.16□□□□□ -0.78
ATXN3-244ENST00000556898 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
ATXN3-244ENST00000556898 SHROOM4Q9ULL8 1493 aa10.15□□□□□ -0.78
ATXN3-244ENST00000556898 PAK3O75914 559 aaPredicted RBP10.14□□□□□ -0.79
ATXN3-244ENST00000556898 CC2D2AQ9P2K1 1620 aa10.12□□□□□ -0.79
ATXN3-244ENST00000556898 PELP1Q8IZL8 1130 aaKnown RBP10.12□□□□□ -0.79
ATXN3-244ENST00000556898 POTEB2H3BUK9 544 aa10.11□□□□□ -0.79
ATXN3-244ENST00000556898 MS4A3Q96HJ5 214 aa10.08□□□□□ -0.8
ATXN3-244ENST00000556898 TSPYL2Q9H2G4 693 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-244ENST00000556898 EIF4G1Q04637 1599 aaKnown RBP10.05□□□□□ -0.8
ATXN3-244ENST00000556898 OTUD5Q96G74 571 aa10.03□□□□□ -0.8
ATXN3-244ENST00000556898 CCDC61Q9Y6R9 512 aa10.03□□□□□ -0.8
ATXN3-244ENST00000556898 ATMINO43313 823 aaPredicted RBP10□□□□□ -0.81
ATXN3-244ENST00000556898 ASTLQ6HA08 431 aaPredicted RBP10□□□□□ -0.81
ATXN3-244ENST00000556898 MIER1Q8N108 512 aa10□□□□□ -0.81
ATXN3-244ENST00000556898 SCRIBQ14160 1630 aa9.99□□□□□ -0.81
ATXN3-244ENST00000556898 RASEFQ8IZ41 740 aa9.98□□□□□ -0.81
ATXN3-244ENST00000556898 KIF12Q96FN5 646 aa9.98□□□□□ -0.81
ATXN3-244ENST00000556898 POTEJP0CG39 1038 aa9.96□□□□□ -0.82
ATXN3-244ENST00000556898 TRPC6Q9Y210 931 aa9.96□□□□□ -0.82
ATXN3-244ENST00000556898 METRNQ9UJH8 293 aa9.94□□□□□ -0.82
ATXN3-244ENST00000556898 ATN1P54259 1190 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-244ENST00000556898 MAP3K13O43283 966 aa9.92□□□□□ -0.82
ATXN3-244ENST00000556898 C7P10643 843 aa9.9□□□□□ -0.82
ATXN3-244ENST00000556898 SLC39A7Q92504 469 aa9.9□□□□□ -0.82
ATXN3-244ENST00000556898 BMP2KQ9NSY1 1161 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-244ENST00000556898 PLEKHG5O94827 1062 aa9.89□□□□□ -0.83
ATXN3-244ENST00000556898 FKBP8Q14318 412 aa9.89□□□□□ -0.83
ATXN3-244ENST00000556898 PLCD3Q8N3E9 789 aa9.89□□□□□ -0.83
ATXN3-244ENST00000556898 POTEFA5A3E0 1075 aa9.87□□□□□ -0.83
ATXN3-244ENST00000556898 NUBP1P53384 320 aa9.87□□□□□ -0.83
ATXN3-244ENST00000556898 CUX2O14529 1486 aa9.85□□□□□ -0.83
ATXN3-244ENST00000556898 TTLL13PA6NNM8 815 aa9.8□□□□□ -0.84
ATXN3-244ENST00000556898 TIE1P35590 1138 aa9.8□□□□□ -0.84
ATXN3-244ENST00000556898 COLQQ9Y215 455 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-244ENST00000556898 ERCC6Q03468 1493 aa9.78□□□□□ -0.84
ATXN3-244ENST00000556898 PCDHB13Q9Y5F0 798 aa9.77□□□□□ -0.85
ATXN3-244ENST00000556898 POTEMA6NI47 508 aa9.75□□□□□ -0.85
ATXN3-244ENST00000556898 IFNL1Q8IU54 200 aa9.75□□□□□ -0.85
ATXN3-244ENST00000556898 NCAPD3P42695 1498 aa9.74□□□□□ -0.85
ATXN3-244ENST00000556898 SGIP1Q9BQI5 828 aa9.74□□□□□ -0.85
ATXN3-244ENST00000556898 PLSCR2Q9NRY7 297 aa9.74□□□□□ -0.85
ATXN3-244ENST00000556898 ZBTB47Q9UFB7 747 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-244ENST00000556898 LCE2DQ5TA82 110 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-244ENST00000556898 POTEGQ6S5H5 508 aa9.73□□□□□ -0.85
ATXN3-244ENST00000556898 MAMSTRQ6ZN01 415 aa9.73□□□□□ -0.85
ATXN3-244ENST00000556898 TRIM35Q9UPQ4 493 aa9.72□□□□□ -0.85
ATXN3-244ENST00000556898 FAM212AQ96EL1 285 aa9.7□□□□□ -0.86
ATXN3-244ENST00000556898 SCUBE2Q9NQ36 999 aa9.68□□□□□ -0.86
ATXN3-244ENST00000556898 SEC24BO95487 1268 aa9.67□□□□□ -0.86
ATXN3-244ENST00000556898 TRIM41Q8WV44 630 aa9.67□□□□□ -0.86
ATXN3-244ENST00000556898 PYGBP11216 843 aa9.66□□□□□ -0.86
ATXN3-244ENST00000556898 DCAF8Q5TAQ9 597 aa9.66□□□□□ -0.86
ATXN3-244ENST00000556898 FAM163AQ96GL9 167 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-244ENST00000556898 TMEM106CQ9BVX2 250 aa9.66□□□□□ -0.86
ATXN3-244ENST00000556898 IER5LQ5T953 404 aa9.65□□□□□ -0.86
ATXN3-244ENST00000556898 ATAD2BQ9ULI0 1458 aa9.65□□□□□ -0.87
ATXN3-244ENST00000556898 FBXO3Q9UK99 471 aa9.62□□□□□ -0.87
ATXN3-244ENST00000556898 PCDHB8Q9UN66 801 aa9.61□□□□□ -0.87
ATXN3-244ENST00000556898 NESP48681 1621 aa9.6□□□□□ -0.87
ATXN3-244ENST00000556898 VASPP50552 380 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-244ENST00000556898 IRX5P78411 483 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-244ENST00000556898 MROH2BQ7Z745 1585 aa9.57□□□□□ -0.88
ATXN3-244ENST00000556898 SMARCA2P51531 1590 aa9.56□□□□□ -0.88
ATXN3-244ENST00000556898 HMGXB3Q12766 1538 aa9.55□□□□□ -0.88
ATXN3-244ENST00000556898 SUPT5HO00267 1087 aaKnown RBP9.54□□□□□ -0.88
ATXN3-244ENST00000556898 PLCG2P16885 1265 aa9.54□□□□□ -0.88
ATXN3-244ENST00000556898 KLHL34Q8N239 644 aa9.54□□□□□ -0.88
ATXN3-244ENST00000556898 SLAIN1Q8ND83 568 aa9.53□□□□□ -0.88
ATXN3-244ENST00000556898 RSF1Q96T23 1441 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-244ENST00000556898 PDS5BQ9NTI5 1447 aa9.53□□□□□ -0.88
ATXN3-244ENST00000556898 SMARCA4P51532 1647 aa9.53□□□□□ -0.88
ATXN3-244ENST00000556898 BAZ1AQ9NRL2 1556 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-244ENST00000556898 BAZ1BQ9UIG0 1483 aaKnown RBP9.52□□□□□ -0.89
ATXN3-244ENST00000556898 OCEL1Q9H607 264 aa9.51□□□□□ -0.89
ATXN3-244ENST00000556898 PCDH10Q9P2E7 1040 aa9.51□□□□□ -0.89
ATXN3-244ENST00000556898 GSE1Q14687 1217 aa9.48□□□□□ -0.89
ATXN3-244ENST00000556898 WIZO95785 1651 aa9.48□□□□□ -0.89
ATXN3-244ENST00000556898 THOC2Q8NI27 1593 aaKnown RBP9.47□□□□□ -0.89
ATXN3-244ENST00000556898 LAMC3Q9Y6N6 1575 aa9.47□□□□□ -0.89
ATXN3-244ENST00000556898 ST18O60284 1047 aa9.46□□□□□ -0.9
ATXN3-244ENST00000556898 CHRM1P11229 460 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-244ENST00000556898 IFNLR1Q8IU57 520 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-244ENST00000556898 CADPSQ9ULU8 1353 aa9.46□□□□□ -0.9
ATXN3-244ENST00000556898 PDCD7Q8N8D1 485 aaKnown RBP9.44□□□□□ -0.9
ATXN3-244ENST00000556898 ZNF467Q7Z7K2 595 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-244ENST00000556898 PSEN1P49768 467 aa9.42□□□□□ -0.9
ATXN3-244ENST00000556898 CDAN1Q8IWY9 1227 aa9.41□□□□□ -0.9
ATXN3-244ENST00000556898 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
ATXN3-244ENST00000556898 MRC2Q9UBG0 1479 aa9.4□□□□□ -0.91
ATXN3-244ENST00000556898 SPOCK2Q92563 424 aa9.38□□□□□ -0.91
ATXN3-244ENST00000556898 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.38□□□□□ -0.91
ATXN3-244ENST00000556898 MKRN3Q13064 507 aaKnown RBP9.37□□□□□ -0.91
ATXN3-244ENST00000556898 CIZ1Q9ULV3 898 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-244ENST00000556898 DPY19L2Q6NUT2 758 aa9.35□□□□□ -0.91
ATXN3-244ENST00000556898 ILDR1Q86SU0 546 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-244ENST00000556898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.913e-6■■□□□ 13.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms