RNA–Protein interactions for RNA: ENST00000556890.1

AL390334.1-204, humanhuman

TSL 1 (best)

Gene AL390334.1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390334.1-204ENST00000556890 ZCCHC6Q5VYS8 1495 aaKnown RBP13.67□□□□□ -0.22
AL390334.1-204ENST00000556890 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
AL390334.1-204ENST00000556890 PHF12Q96QT6 1004 aa13.65□□□□□ -0.22
AL390334.1-204ENST00000556890 BICRAQ9NZM4 1560 aa13.63□□□□□ -0.23
AL390334.1-204ENST00000556890 MIER1Q8N108 512 aa13.63□□□□□ -0.23
AL390334.1-204ENST00000556890 DCAF1Q9Y4B6 1507 aa13.61□□□□□ -0.23
AL390334.1-204ENST00000556890 FKBP8Q14318 412 aa13.57□□□□□ -0.24
AL390334.1-204ENST00000556890 SCRIBQ14160 1630 aa13.54□□□□□ -0.24
AL390334.1-204ENST00000556890 TSPYL2Q9H2G4 693 aaPredicted RBP13.54□□□□□ -0.24
AL390334.1-204ENST00000556890 PLCD3Q8N3E9 789 aa13.52□□□□□ -0.25
AL390334.1-204ENST00000556890 CCDC61Q9Y6R9 512 aa13.51□□□□□ -0.25
AL390334.1-204ENST00000556890 ZBTB47Q9UFB7 747 aaPredicted RBP13.5□□□□□ -0.25
AL390334.1-204ENST00000556890 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
AL390334.1-204ENST00000556890 SHROOM4Q9ULL8 1493 aa13.46□□□□□ -0.25
AL390334.1-204ENST00000556890 ASTLQ6HA08 431 aaPredicted RBP13.43□□□□□ -0.26
AL390334.1-204ENST00000556890 RASEFQ8IZ41 740 aa13.43□□□□□ -0.26
AL390334.1-204ENST00000556890 KIF12Q96FN5 646 aa13.43□□□□□ -0.26
AL390334.1-204ENST00000556890 FBXO3Q9UK99 471 aa13.39□□□□□ -0.27
AL390334.1-204ENST00000556890 ATMINO43313 823 aaPredicted RBP13.38□□□□□ -0.27
AL390334.1-204ENST00000556890 PELP1Q8IZL8 1130 aaKnown RBP13.38□□□□□ -0.27
AL390334.1-204ENST00000556890 CC2D2AQ9P2K1 1620 aa13.35□□□□□ -0.27
AL390334.1-204ENST00000556890 NUBP1P53384 320 aa13.35□□□□□ -0.27
AL390334.1-204ENST00000556890 SLC39A7Q92504 469 aa13.35□□□□□ -0.27
AL390334.1-204ENST00000556890 C7P10643 843 aa13.34□□□□□ -0.27
AL390334.1-204ENST00000556890 MAP3K13O43283 966 aa13.33□□□□□ -0.28
AL390334.1-204ENST00000556890 EIF4G1Q04637 1599 aaKnown RBP13.32□□□□□ -0.28
AL390334.1-204ENST00000556890 SGIP1Q9BQI5 828 aa13.31□□□□□ -0.28
AL390334.1-204ENST00000556890 METRNQ9UJH8 293 aa13.3□□□□□ -0.28
AL390334.1-204ENST00000556890 POTEB2H3BUK9 544 aa13.28□□□□□ -0.28
AL390334.1-204ENST00000556890 TIE1P35590 1138 aa13.28□□□□□ -0.28
AL390334.1-204ENST00000556890 FAM212AQ96EL1 285 aa13.28□□□□□ -0.28
AL390334.1-204ENST00000556890 ATN1P54259 1190 aaPredicted RBP13.27□□□□□ -0.29
AL390334.1-204ENST00000556890 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
AL390334.1-204ENST00000556890 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
AL390334.1-204ENST00000556890 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
AL390334.1-204ENST00000556890 TRPC6Q9Y210 931 aa13.22□□□□□ -0.29
AL390334.1-204ENST00000556890 PCDHB13Q9Y5F0 798 aa13.22□□□□□ -0.29
AL390334.1-204ENST00000556890 TTLL13PA6NNM8 815 aa13.17□□□□□ -0.3
AL390334.1-204ENST00000556890 MAMSTRQ6ZN01 415 aa13.17□□□□□ -0.3
AL390334.1-204ENST00000556890 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
AL390334.1-204ENST00000556890 DCAF8Q5TAQ9 597 aa13.15□□□□□ -0.3
AL390334.1-204ENST00000556890 IFNL1Q8IU54 200 aa13.13□□□□□ -0.31
AL390334.1-204ENST00000556890 POTEJP0CG39 1038 aa13.1□□□□□ -0.31
AL390334.1-204ENST00000556890 IER5LQ5T953 404 aa13.1□□□□□ -0.31
AL390334.1-204ENST00000556890 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
AL390334.1-204ENST00000556890 POTEFA5A3E0 1075 aa13.08□□□□□ -0.32
AL390334.1-204ENST00000556890 TRIM35Q9UPQ4 493 aa13.08□□□□□ -0.32
AL390334.1-204ENST00000556890 SCUBE2Q9NQ36 999 aa13.07□□□□□ -0.32
AL390334.1-204ENST00000556890 SEC24BO95487 1268 aa13.06□□□□□ -0.32
AL390334.1-204ENST00000556890 GSE1Q14687 1217 aa13.06□□□□□ -0.32
AL390334.1-204ENST00000556890 PYGBP11216 843 aa13.04□□□□□ -0.32
AL390334.1-204ENST00000556890 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
AL390334.1-204ENST00000556890 COLQQ9Y215 455 aaPredicted RBP13.01□□□□□ -0.33
AL390334.1-204ENST00000556890 CHRM1P11229 460 aaPredicted RBP12.96□□□□□ -0.33
AL390334.1-204ENST00000556890 ZNF467Q7Z7K2 595 aaPredicted RBP12.94□□□□□ -0.34
AL390334.1-204ENST00000556890 PCDHB8Q9UN66 801 aa12.94□□□□□ -0.34
AL390334.1-204ENST00000556890 PLCG2P16885 1265 aa12.91□□□□□ -0.34
AL390334.1-204ENST00000556890 SPOCK2Q92563 424 aa12.91□□□□□ -0.34
AL390334.1-204ENST00000556890 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
AL390334.1-204ENST00000556890 IFNLR1Q8IU57 520 aaPredicted RBP12.9□□□□□ -0.34
AL390334.1-204ENST00000556890 POTEMA6NI47 508 aa12.89□□□□□ -0.35
AL390334.1-204ENST00000556890 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
AL390334.1-204ENST00000556890 POTEGQ6S5H5 508 aa12.86□□□□□ -0.35
AL390334.1-204ENST00000556890 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
AL390334.1-204ENST00000556890 SMARCA2P51531 1590 aa12.86□□□□□ -0.35
AL390334.1-204ENST00000556890 NCAPD3P42695 1498 aa12.84□□□□□ -0.35
AL390334.1-204ENST00000556890 BAZ1AQ9NRL2 1556 aaPredicted RBP12.83□□□□□ -0.36
AL390334.1-204ENST00000556890 ATAD2BQ9ULI0 1458 aa12.82□□□□□ -0.36
AL390334.1-204ENST00000556890 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
AL390334.1-204ENST00000556890 FAM163AQ96GL9 167 aaPredicted RBP12.81□□□□□ -0.36
AL390334.1-204ENST00000556890 CIZ1Q9ULV3 898 aaPredicted RBP12.8□□□□□ -0.36
AL390334.1-204ENST00000556890 PCDH10Q9P2E7 1040 aa12.79□□□□□ -0.36
AL390334.1-204ENST00000556890 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
AL390334.1-204ENST00000556890 PSEN1P49768 467 aa12.77□□□□□ -0.37
AL390334.1-204ENST00000556890 LCE2DQ5TA82 110 aaPredicted RBP12.77□□□□□ -0.37
AL390334.1-204ENST00000556890 SLAIN1Q8ND83 568 aa12.77□□□□□ -0.37
AL390334.1-204ENST00000556890 MKRN3Q13064 507 aaKnown RBP12.76□□□□□ -0.37
AL390334.1-204ENST00000556890 BAZ1BQ9UIG0 1483 aaKnown RBP12.76□□□□□ -0.37
AL390334.1-204ENST00000556890 ERCC6Q03468 1493 aa12.75□□□□□ -0.37
AL390334.1-204ENST00000556890 PDAP1Q13442 181 aaKnown RBP12.75□□□□□ -0.37
AL390334.1-204ENST00000556890 PEG3Q9GZU2 1588 aa12.74□□□□□ -0.37
AL390334.1-204ENST00000556890 PLSCR2Q9NRY7 297 aa12.74□□□□□ -0.37
AL390334.1-204ENST00000556890 TRIM41Q8WV44 630 aa12.73□□□□□ -0.37
AL390334.1-204ENST00000556890 MROH2BQ7Z745 1585 aa12.7□□□□□ -0.38
AL390334.1-204ENST00000556890 PDCD7Q8N8D1 485 aaKnown RBP12.7□□□□□ -0.38
AL390334.1-204ENST00000556890 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.69□□□□□ -0.38
AL390334.1-204ENST00000556890 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
AL390334.1-204ENST00000556890 CUX2O14529 1486 aa12.67□□□□□ -0.38
AL390334.1-204ENST00000556890 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.66□□□□□ -0.38
AL390334.1-204ENST00000556890 NESP48681 1621 aa12.66□□□□□ -0.38
AL390334.1-204ENST00000556890 LAMC3Q9Y6N6 1575 aa12.64□□□□□ -0.39
AL390334.1-204ENST00000556890 KIF21AQ7Z4S6 1674 aa12.64□□□□□ -0.39
AL390334.1-204ENST00000556890 SNPHO15079 494 aa12.63□□□□□ -0.39
AL390334.1-204ENST00000556890 ILDR1Q86SU0 546 aaPredicted RBP12.63□□□□□ -0.39
AL390334.1-204ENST00000556890 WIZO95785 1651 aa12.63□□□□□ -0.39
AL390334.1-204ENST00000556890 CABP2Q9NPB3 220 aa12.61□□□□□ -0.39
AL390334.1-204ENST00000556890 ST18O60284 1047 aa12.6□□□□□ -0.39
AL390334.1-204ENST00000556890 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
AL390334.1-204ENST00000556890 THOC2Q8NI27 1593 aaKnown RBP12.58□□□□□ -0.4
AL390334.1-204ENST00000556890 TMEM121BQ9BXQ6 578 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms