RNA–Protein interactions for RNA: ENST00000556113.1

CNIH1-205, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH1, Length 523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-205ENST00000556113 DCAF8L2P0C7V8 631 aa13.45□□□□□ -0.26
CNIH1-205ENST00000556113 EVX2Q03828 476 aa13.4□□□□□ -0.26
CNIH1-205ENST00000556113 ZNF579Q8NAF0 562 aaKnown RBP13.4□□□□□ -0.26
CNIH1-205ENST00000556113 ZRANB1Q9UGI0 708 aa13.4□□□□□ -0.26
CNIH1-205ENST00000556113 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
CNIH1-205ENST00000556113 BICRAQ9NZM4 1560 aa13.33□□□□□ -0.28
CNIH1-205ENST00000556113 FAM212AQ96EL1 285 aa13.33□□□□□ -0.28
CNIH1-205ENST00000556113 NUBP1P53384 320 aa13.31□□□□□ -0.28
CNIH1-205ENST00000556113 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
CNIH1-205ENST00000556113 SHROOM4Q9ULL8 1493 aa13.3□□□□□ -0.28
CNIH1-205ENST00000556113 GABBR2O75899 941 aa13.27□□□□□ -0.29
CNIH1-205ENST00000556113 RASEFQ8IZ41 740 aa13.27□□□□□ -0.29
CNIH1-205ENST00000556113 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.29
CNIH1-205ENST00000556113 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
CNIH1-205ENST00000556113 SPOCK2Q92563 424 aa13.26□□□□□ -0.29
CNIH1-205ENST00000556113 CCDC61Q9Y6R9 512 aa13.25□□□□□ -0.29
CNIH1-205ENST00000556113 GSE1Q14687 1217 aa13.24□□□□□ -0.29
CNIH1-205ENST00000556113 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
CNIH1-205ENST00000556113 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
CNIH1-205ENST00000556113 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
CNIH1-205ENST00000556113 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
CNIH1-205ENST00000556113 TRIM41Q8WV44 630 aa13.11□□□□□ -0.31
CNIH1-205ENST00000556113 DCBLD2Q96PD2 775 aa13.1□□□□□ -0.31
CNIH1-205ENST00000556113 GALR2O43603 387 aaPredicted RBP13.07□□□□□ -0.32
CNIH1-205ENST00000556113 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
CNIH1-205ENST00000556113 MS4A3Q96HJ5 214 aa13.05□□□□□ -0.32
CNIH1-205ENST00000556113 MAP3K13O43283 966 aa13.04□□□□□ -0.32
CNIH1-205ENST00000556113 PCDHB13Q9Y5F0 798 aa13.03□□□□□ -0.32
CNIH1-205ENST00000556113 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.33
CNIH1-205ENST00000556113 ZNF467Q7Z7K2 595 aaPredicted RBP12.99□□□□□ -0.33
CNIH1-205ENST00000556113 PYGBP11216 843 aa12.98□□□□□ -0.33
CNIH1-205ENST00000556113 TIE1P35590 1138 aa12.98□□□□□ -0.33
CNIH1-205ENST00000556113 EIF4G1Q04637 1599 aaKnown RBP12.95□□□□□ -0.34
CNIH1-205ENST00000556113 ASTLQ6HA08 431 aaPredicted RBP12.95□□□□□ -0.34
CNIH1-205ENST00000556113 IFNL1Q8IU54 200 aa12.92□□□□□ -0.34
CNIH1-205ENST00000556113 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
CNIH1-205ENST00000556113 ATMINO43313 823 aaPredicted RBP12.89□□□□□ -0.35
CNIH1-205ENST00000556113 CC2D2AQ9P2K1 1620 aa12.86□□□□□ -0.35
CNIH1-205ENST00000556113 SLC39A7Q92504 469 aa12.85□□□□□ -0.35
CNIH1-205ENST00000556113 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
CNIH1-205ENST00000556113 C7P10643 843 aa12.84□□□□□ -0.35
CNIH1-205ENST00000556113 TAOK2Q9UL54 1235 aa12.84□□□□□ -0.35
CNIH1-205ENST00000556113 TTLL13PA6NNM8 815 aa12.83□□□□□ -0.36
CNIH1-205ENST00000556113 SMARCA4P51532 1647 aa12.81□□□□□ -0.36
CNIH1-205ENST00000556113 IER5LQ5T953 404 aa12.81□□□□□ -0.36
CNIH1-205ENST00000556113 PCDHB8Q9UN66 801 aa12.81□□□□□ -0.36
CNIH1-205ENST00000556113 BAZ1AQ9NRL2 1556 aaPredicted RBP12.81□□□□□ -0.36
CNIH1-205ENST00000556113 PDAP1Q13442 181 aaKnown RBP12.8□□□□□ -0.36
CNIH1-205ENST00000556113 TMEM106CQ9BVX2 250 aa12.8□□□□□ -0.36
CNIH1-205ENST00000556113 ATN1P54259 1190 aaPredicted RBP12.79□□□□□ -0.36
CNIH1-205ENST00000556113 TRPC6Q9Y210 931 aa12.78□□□□□ -0.36
CNIH1-205ENST00000556113 CECR2Q9BXF3 1484 aa12.76□□□□□ -0.37
CNIH1-205ENST00000556113 PEG3Q9GZU2 1588 aa12.76□□□□□ -0.37
CNIH1-205ENST00000556113 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
CNIH1-205ENST00000556113 TRIM35Q9UPQ4 493 aa12.75□□□□□ -0.37
CNIH1-205ENST00000556113 PSEN1P49768 467 aa12.74□□□□□ -0.37
CNIH1-205ENST00000556113 METRNQ9UJH8 293 aa12.74□□□□□ -0.37
CNIH1-205ENST00000556113 ECM2O94769 699 aaPredicted RBP12.72□□□□□ -0.37
CNIH1-205ENST00000556113 GOLGA2Q08379 1002 aa12.72□□□□□ -0.37
CNIH1-205ENST00000556113 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
CNIH1-205ENST00000556113 VGFO15240 615 aaPredicted RBP12.71□□□□□ -0.37
CNIH1-205ENST00000556113 PKD2Q13563 968 aa12.71□□□□□ -0.37
CNIH1-205ENST00000556113 SMARCA2P51531 1590 aa12.71□□□□□ -0.37
CNIH1-205ENST00000556113 LHX8Q68G74 356 aa12.69□□□□□ -0.38
CNIH1-205ENST00000556113 MROH2BQ7Z745 1585 aa12.68□□□□□ -0.38
CNIH1-205ENST00000556113 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
CNIH1-205ENST00000556113 NCAPD3P42695 1498 aa12.67□□□□□ -0.38
CNIH1-205ENST00000556113 ATAD2BQ9ULI0 1458 aa12.66□□□□□ -0.38
CNIH1-205ENST00000556113 SEC24BO95487 1268 aa12.66□□□□□ -0.38
CNIH1-205ENST00000556113 MKRN3Q13064 507 aaKnown RBP12.64□□□□□ -0.39
CNIH1-205ENST00000556113 RNF25Q96BH1 459 aaPredicted RBP12.64□□□□□ -0.39
CNIH1-205ENST00000556113 MAMSTRQ6ZN01 415 aa12.61□□□□□ -0.39
CNIH1-205ENST00000556113 PLCG2P16885 1265 aa12.6□□□□□ -0.39
CNIH1-205ENST00000556113 OCEL1Q9H607 264 aa12.59□□□□□ -0.39
CNIH1-205ENST00000556113 WIZO95785 1651 aa12.57□□□□□ -0.4
CNIH1-205ENST00000556113 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
CNIH1-205ENST00000556113 CABP2Q9NPB3 220 aa12.56□□□□□ -0.4
CNIH1-205ENST00000556113 RSF1Q96T23 1441 aaPredicted RBP12.55□□□□□ -0.4
CNIH1-205ENST00000556113 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
CNIH1-205ENST00000556113 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.55□□□□□ -0.4
CNIH1-205ENST00000556113 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
CNIH1-205ENST00000556113 RGL2O15211 777 aa12.53□□□□□ -0.4
CNIH1-205ENST00000556113 COLQQ9Y215 455 aaPredicted RBP12.52□□□□□ -0.41
CNIH1-205ENST00000556113 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
CNIH1-205ENST00000556113 SCUBE2Q9NQ36 999 aa12.51□□□□□ -0.41
CNIH1-205ENST00000556113 POTEFA5A3E0 1075 aa12.5□□□□□ -0.41
CNIH1-205ENST00000556113 SOX12O15370 315 aa12.5□□□□□ -0.41
CNIH1-205ENST00000556113 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
CNIH1-205ENST00000556113 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.5□□□□□ -0.41
CNIH1-205ENST00000556113 STK25O00506 426 aa12.49□□□□□ -0.41
CNIH1-205ENST00000556113 TOP2AP11388 1531 aaKnown RBP12.48□□□□□ -0.41
CNIH1-205ENST00000556113 BCL11BQ9C0K0 894 aaPredicted RBP12.48□□□□□ -0.41
CNIH1-205ENST00000556113 L3MBTL3Q96JM7 780 aaPredicted RBP12.47□□□□□ -0.41
CNIH1-205ENST00000556113 POTEB2H3BUK9 544 aa12.46□□□□□ -0.41
CNIH1-205ENST00000556113 STK24Q9Y6E0 443 aa12.45□□□□□ -0.42
CNIH1-205ENST00000556113 EFCAB3Q8N7B9 438 aa12.44□□□□□ -0.42
CNIH1-205ENST00000556113 PDCD7Q8N8D1 485 aaKnown RBP12.44□□□□□ -0.42
CNIH1-205ENST00000556113 HS6ST3Q8IZP7 471 aa12.41□□□□□ -0.42
CNIH1-205ENST00000556113 G3V3G9 751 aa12.4□□□□□ -0.42
CNIH1-205ENST00000556113 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms