RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 C7P10643 843 aa10.93□□□□□ -0.66
EFCAB11-210ENST00000556078 CSRNP3Q8WYN3 585 aa10.93□□□□□ -0.66
EFCAB11-210ENST00000556078 ATMINO43313 823 aaPredicted RBP10.9□□□□□ -0.66
EFCAB11-210ENST00000556078 ASTLQ6HA08 431 aaPredicted RBP10.9□□□□□ -0.66
EFCAB11-210ENST00000556078 MS4A3Q96HJ5 214 aa10.89□□□□□ -0.67
EFCAB11-210ENST00000556078 NPM1P06748 294 aaKnown RBP eCLIP10.88□□□□□ -0.67
EFCAB11-210ENST00000556078 SCUBE2Q9NQ36 999 aa10.88□□□□□ -0.67
EFCAB11-210ENST00000556078 SPDYE4A6NLX3 237 aa10.84□□□□□ -0.67
EFCAB11-210ENST00000556078 MNX1P50219 401 aaPredicted RBP10.8□□□□□ -0.68
EFCAB11-210ENST00000556078 CDAN1Q8IWY9 1227 aa10.79□□□□□ -0.68
EFCAB11-210ENST00000556078 ATN1P54259 1190 aaPredicted RBP10.77□□□□□ -0.69
EFCAB11-210ENST00000556078 TSPYL2Q9H2G4 693 aaPredicted RBP10.71□□□□□ -0.69
EFCAB11-210ENST00000556078 POTEFA5A3E0 1075 aa10.7□□□□□ -0.7
EFCAB11-210ENST00000556078 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
EFCAB11-210ENST00000556078 SEC24BO95487 1268 aa10.62□□□□□ -0.71
EFCAB11-210ENST00000556078 TRPC6Q9Y210 931 aa10.62□□□□□ -0.71
EFCAB11-210ENST00000556078 CCDC61Q9Y6R9 512 aa10.61□□□□□ -0.71
EFCAB11-210ENST00000556078 KIF12Q96FN5 646 aa10.6□□□□□ -0.71
EFCAB11-210ENST00000556078 PROM2Q8N271 834 aa10.59□□□□□ -0.71
EFCAB11-210ENST00000556078 COLQQ9Y215 455 aaPredicted RBP10.59□□□□□ -0.71
EFCAB11-210ENST00000556078 MMRN1Q13201 1228 aa10.57□□□□□ -0.72
EFCAB11-210ENST00000556078 ST18O60284 1047 aa10.56□□□□□ -0.72
EFCAB11-210ENST00000556078 TIE1P35590 1138 aa10.54□□□□□ -0.72
EFCAB11-210ENST00000556078 SLAIN1Q8ND83 568 aa10.54□□□□□ -0.72
EFCAB11-210ENST00000556078 MAP3K13O43283 966 aa10.53□□□□□ -0.72
EFCAB11-210ENST00000556078 EHMT2Q96KQ7 1210 aa10.53□□□□□ -0.72
EFCAB11-210ENST00000556078 SPNS2Q8IVW8 549 aa10.52□□□□□ -0.73
EFCAB11-210ENST00000556078 TTLL13PA6NNM8 815 aa10.5□□□□□ -0.73
EFCAB11-210ENST00000556078 TRIM35Q9UPQ4 493 aa10.45□□□□□ -0.74
EFCAB11-210ENST00000556078 IER5LQ5T953 404 aa10.42□□□□□ -0.74
EFCAB11-210ENST00000556078 PLEKHG5O94827 1062 aa10.41□□□□□ -0.74
EFCAB11-210ENST00000556078 RASEFQ8IZ41 740 aa10.39□□□□□ -0.75
EFCAB11-210ENST00000556078 MIER1Q8N108 512 aa10.37□□□□□ -0.75
EFCAB11-210ENST00000556078 MARVELD3Q96A59 401 aa10.36□□□□□ -0.75
EFCAB11-210ENST00000556078 SGIP1Q9BQI5 828 aa10.36□□□□□ -0.75
EFCAB11-210ENST00000556078 TMEM121BQ9BXQ6 578 aaPredicted RBP10.36□□□□□ -0.75
EFCAB11-210ENST00000556078 PLCG2P16885 1265 aa10.35□□□□□ -0.75
EFCAB11-210ENST00000556078 PCDHB13Q9Y5F0 798 aa10.34□□□□□ -0.75
EFCAB11-210ENST00000556078 SNPHO15079 494 aa10.3□□□□□ -0.76
EFCAB11-210ENST00000556078 TMEM106CQ9BVX2 250 aa10.28□□□□□ -0.76
EFCAB11-210ENST00000556078 ZBTB47Q9UFB7 747 aaPredicted RBP10.25□□□□□ -0.77
EFCAB11-210ENST00000556078 IFNL1Q8IU54 200 aa10.24□□□□□ -0.77
EFCAB11-210ENST00000556078 PLCD3Q8N3E9 789 aa10.24□□□□□ -0.77
EFCAB11-210ENST00000556078 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.24□□□□□ -0.77
EFCAB11-210ENST00000556078 NUBP1P53384 320 aa10.23□□□□□ -0.77
EFCAB11-210ENST00000556078 IRX5P78411 483 aaPredicted RBP10.23□□□□□ -0.77
EFCAB11-210ENST00000556078 EMP3P54852 163 aa10.21□□□□□ -0.77
EFCAB11-210ENST00000556078 OCEL1Q9H607 264 aa10.19□□□□□ -0.78
EFCAB11-210ENST00000556078 FAM212AQ96EL1 285 aa10.16□□□□□ -0.78
EFCAB11-210ENST00000556078 KRTAP3-3Q9BYR6 98 aa10.16□□□□□ -0.78
EFCAB11-210ENST00000556078 KRTAP3-2Q9BYR7 98 aa10.16□□□□□ -0.78
EFCAB11-210ENST00000556078 FAM205CA6NFA0 338 aa10.15□□□□□ -0.78
EFCAB11-210ENST00000556078 HS3ST6Q96QI5 342 aa10.15□□□□□ -0.78
EFCAB11-210ENST00000556078 POTEB3A0JP26 581 aa10.12□□□□□ -0.79
EFCAB11-210ENST00000556078 POTEBQ6S5H4 581 aa10.12□□□□□ -0.79
EFCAB11-210ENST00000556078 C3orf67Q6ZVT6 689 aa10.08□□□□□ -0.8
EFCAB11-210ENST00000556078 DCAF8Q5TAQ9 597 aa10□□□□□ -0.81
EFCAB11-210ENST00000556078 PYGBP11216 843 aa9.99□□□□□ -0.81
EFCAB11-210ENST00000556078 L3MBTL3Q96JM7 780 aaPredicted RBP9.99□□□□□ -0.81
EFCAB11-210ENST00000556078 RNF166Q96A37 237 aaPredicted RBP9.98□□□□□ -0.81
EFCAB11-210ENST00000556078 PCDHB8Q9UN66 801 aa9.98□□□□□ -0.81
EFCAB11-210ENST00000556078 PDCD7Q8N8D1 485 aaKnown RBP9.97□□□□□ -0.81
EFCAB11-210ENST00000556078 GOLGA2Q08379 1002 aa9.93□□□□□ -0.82
EFCAB11-210ENST00000556078 MKRN3Q13064 507 aaKnown RBP9.93□□□□□ -0.82
EFCAB11-210ENST00000556078 FKBP8Q14318 412 aa9.91□□□□□ -0.82
EFCAB11-210ENST00000556078 ZNF467Q7Z7K2 595 aaPredicted RBP9.9□□□□□ -0.82
EFCAB11-210ENST00000556078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.89□□□□□ -0.83
EFCAB11-210ENST00000556078 ERBB3P21860 1342 aa9.88□□□□□ -0.83
EFCAB11-210ENST00000556078 FBXO3Q9UK99 471 aa9.88□□□□□ -0.83
EFCAB11-210ENST00000556078 MYT1LQ9UL68 1186 aa9.88□□□□□ -0.83
EFCAB11-210ENST00000556078 ZNF710Q8N1W2 664 aa9.87□□□□□ -0.83
EFCAB11-210ENST00000556078 CHRM1P11229 460 aaPredicted RBP9.86□□□□□ -0.83
EFCAB11-210ENST00000556078 GSE1Q14687 1217 aa9.86□□□□□ -0.83
EFCAB11-210ENST00000556078 HOXB3P14651 431 aaPredicted RBP9.84□□□□□ -0.83
EFCAB11-210ENST00000556078 HOXB1P14653 301 aaPredicted RBP9.84□□□□□ -0.83
EFCAB11-210ENST00000556078 ILDR1Q86SU0 546 aaPredicted RBP9.83□□□□□ -0.84
EFCAB11-210ENST00000556078 G3V3G9 751 aa9.8□□□□□ -0.84
EFCAB11-210ENST00000556078 PSEN1P49768 467 aa9.8□□□□□ -0.84
EFCAB11-210ENST00000556078 VARS2Q5ST30 1063 aaKnown RBP9.79□□□□□ -0.84
EFCAB11-210ENST00000556078 DPY19L2Q6NUT2 758 aa9.79□□□□□ -0.84
EFCAB11-210ENST00000556078 KLHL34Q8N239 644 aa9.77□□□□□ -0.85
EFCAB11-210ENST00000556078 DOK7Q18PE1 504 aa9.76□□□□□ -0.85
EFCAB11-210ENST00000556078 VASPP50552 380 aaPredicted RBP9.75□□□□□ -0.85
EFCAB11-210ENST00000556078 PDAP1Q13442 181 aaKnown RBP9.74□□□□□ -0.85
EFCAB11-210ENST00000556078 BOLA1Q9Y3E2 137 aa9.74□□□□□ -0.85
EFCAB11-210ENST00000556078 RIMBP2O15034 1052 aa9.71□□□□□ -0.86
EFCAB11-210ENST00000556078 ZNF687Q8N1G0 1237 aa9.7□□□□□ -0.86
EFCAB11-210ENST00000556078 PTGER2P43116 358 aa9.68□□□□□ -0.86
EFCAB11-210ENST00000556078 ANKRD13DQ6ZTN6 518 aa9.68□□□□□ -0.86
EFCAB11-210ENST00000556078 CABP2Q9NPB3 220 aa9.66□□□□□ -0.86
EFCAB11-210ENST00000556078 PLA2G2EQ9NZK7 142 aa9.61□□□□□ -0.87
EFCAB11-210ENST00000556078 SPOCK2Q92563 424 aa9.59□□□□□ -0.87
EFCAB11-210ENST00000556078 ZSWIM6Q9HCJ5 1215 aa9.58□□□□□ -0.88
EFCAB11-210ENST00000556078 GPR153Q6NV75 609 aa9.56□□□□□ -0.88
EFCAB11-210ENST00000556078 CIZ1Q9ULV3 898 aaPredicted RBP9.56□□□□□ -0.88
EFCAB11-210ENST00000556078 LSM11P83369 360 aaKnown RBP eCLIP9.53□□□□□ -0.88
EFCAB11-210ENST00000556078 IFNLR1Q8IU57 520 aaPredicted RBP9.53□□□□□ -0.88
EFCAB11-210ENST00000556078 ARSIQ5FYB1 569 aa9.51□□□□□ -0.89
EFCAB11-210ENST00000556078 EFCAB3Q8N7B9 438 aa9.51□□□□□ -0.89
EFCAB11-210ENST00000556078 TMEM92Q6UXU6 159 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms