RNA–Protein interactions for RNA: ENST00000556027.5

DDHD1-207, Transcript of DDHD domain containing 1, humanhuman

TSL 1 (best)

Gene DDHD1, Length 3,951 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDHD1-207ENST00000556027 ERICH6BQ5W0A0 696 aa4.74□□□□□ -1.65
DDHD1-207ENST00000556027 PDIA4P13667 645 aaKnown RBP4.73□□□□□ -1.65
DDHD1-207ENST00000556027 IL27Q8NEV9 243 aa4.72□□□□□ -1.65
DDHD1-207ENST00000556027 RBM19Q9Y4C8 960 aaKnown RBP4.72□□□□□ -1.65
DDHD1-207ENST00000556027 FGD1P98174 961 aa4.71□□□□□ -1.66
DDHD1-207ENST00000556027 CNKSR2Q8WXI2 1034 aa4.71□□□□□ -1.66
DDHD1-207ENST00000556027 DEKP35659 375 aaKnown RBP4.7□□□□□ -1.66
DDHD1-207ENST00000556027 MIER1Q8N108 512 aa4.7□□□□□ -1.66
DDHD1-207ENST00000556027 NEFLP07196 543 aa4.7□□□□□ -1.66
DDHD1-207ENST00000556027 BRD2P25440 801 aaKnown RBP4.7□□□□□ -1.66
DDHD1-207ENST00000556027 AAMPQ13685 434 aa4.69□□□□□ -1.66
DDHD1-207ENST00000556027 LOC105371045A0A1W2PR82 267 aa4.69□□□□□ -1.66
DDHD1-207ENST00000556027 PLSCR2Q9NRY7 297 aa4.69□□□□□ -1.66
DDHD1-207ENST00000556027 FANCIQ9NVI1 1328 aa4.69□□□□□ -1.66
DDHD1-207ENST00000556027 SPRYD3Q8NCJ5 442 aa4.68□□□□□ -1.66
DDHD1-207ENST00000556027 POLR3GLQ9BT43 218 aa4.67□□□□□ -1.66
DDHD1-207ENST00000556027 EIF4G1Q04637 1599 aaKnown RBP4.66□□□□□ -1.66
DDHD1-207ENST00000556027 PUS7Q96PZ0 661 aaKnown RBP4.66□□□□□ -1.66
DDHD1-207ENST00000556027 CHMP4AQ9BY43 222 aa4.66□□□□□ -1.66
DDHD1-207ENST00000556027 ZMYND15Q9H091 742 aa4.66□□□□□ -1.66
DDHD1-207ENST00000556027 CLSPNQ9HAW4 1339 aa4.65□□□□□ -1.67
DDHD1-207ENST00000556027 RSPH6AQ9H0K4 717 aa4.65□□□□□ -1.67
DDHD1-207ENST00000556027 TAF7LQ5H9L4 462 aa4.64□□□□□ -1.67
DDHD1-207ENST00000556027 C11orf95C9JLR9 678 aaPredicted RBP4.63□□□□□ -1.67
DDHD1-207ENST00000556027 ARID3AQ99856 593 aa4.63□□□□□ -1.67
DDHD1-207ENST00000556027 BCL11BQ9C0K0 894 aaPredicted RBP4.63□□□□□ -1.67
DDHD1-207ENST00000556027 PRDM4Q9UKN5 801 aa4.63□□□□□ -1.67
DDHD1-207ENST00000556027 WASHC2AQ641Q2 1341 aa4.63□□□□□ -1.67
DDHD1-207ENST00000556027 PPP6R1Q9UPN7 881 aa4.63□□□□□ -1.67
DDHD1-207ENST00000556027 SP7Q8TDD2 431 aaPredicted RBP4.62□□□□□ -1.67
DDHD1-207ENST00000556027 WASHC2CQ9Y4E1 1318 aa4.62□□□□□ -1.67
DDHD1-207ENST00000556027 ZNF326Q5BKZ1 582 aaKnown RBP4.62□□□□□ -1.67
DDHD1-207ENST00000556027 ATXN8OSP0DMR3 200 aa4.61□□□□□ -1.67
DDHD1-207ENST00000556027 PDE4CQ08493 712 aa4.61□□□□□ -1.67
DDHD1-207ENST00000556027 RBM10P98175 930 aaKnown RBP4.6□□□□□ -1.67
DDHD1-207ENST00000556027 NACADO15069 1562 aa4.59□□□□□ -1.67
DDHD1-207ENST00000556027 NCAPD3P42695 1498 aa4.58□□□□□ -1.68
DDHD1-207ENST00000556027 PAK3O75914 559 aaPredicted RBP4.58□□□□□ -1.68
DDHD1-207ENST00000556027 SAMD1Q6SPF0 538 aaPredicted RBP4.58□□□□□ -1.68
DDHD1-207ENST00000556027 BCCIPQ9P287 314 aaKnown RBP eCLIP4.58□□□□□ -1.68
DDHD1-207ENST00000556027 ZNF316A6NFI3 1004 aaPredicted RBP4.57□□□□□ -1.68
DDHD1-207ENST00000556027 YTHDC1Q96MU7 727 aaKnown RBP4.57□□□□□ -1.68
DDHD1-207ENST00000556027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.57□□□□□ -1.68
DDHD1-207ENST00000556027 DCAF8L1A6NGE4 600 aa4.55□□□□□ -1.68
DDHD1-207ENST00000556027 IGSF3O75054 1194 aa4.55□□□□□ -1.68
DDHD1-207ENST00000556027 RAD21O60216 631 aa4.55□□□□□ -1.68
DDHD1-207ENST00000556027 KCTD17Q8N5Z5 321 aa4.55□□□□□ -1.68
DDHD1-207ENST00000556027 NEUROD2Q15784 382 aa4.55□□□□□ -1.68
DDHD1-207ENST00000556027 RSPH4AQ5TD94 716 aa4.55□□□□□ -1.68
DDHD1-207ENST00000556027 KCNH8Q96L42 1107 aa4.54□□□□□ -1.68
DDHD1-207ENST00000556027 BICRAQ9NZM4 1560 aa4.53□□□□□ -1.68
DDHD1-207ENST00000556027 CHRM1P11229 460 aaPredicted RBP4.53□□□□□ -1.68
DDHD1-207ENST00000556027 GTF2E1P29083 439 aaPredicted RBP4.53□□□□□ -1.68
DDHD1-207ENST00000556027 VASPP50552 380 aaPredicted RBP4.53□□□□□ -1.68
DDHD1-207ENST00000556027 PKD2Q13563 968 aa4.53□□□□□ -1.68
DDHD1-207ENST00000556027 DNAJC5Q9H3Z4 198 aa4.53□□□□□ -1.68
DDHD1-207ENST00000556027 MYT1LQ9UL68 1186 aa4.53□□□□□ -1.68
DDHD1-207ENST00000556027 ECM2O94769 699 aaPredicted RBP4.53□□□□□ -1.68
DDHD1-207ENST00000556027 BRPF1P55201 1214 aaPredicted RBP4.52□□□□□ -1.69
DDHD1-207ENST00000556027 PEG3Q9GZU2 1588 aa4.52□□□□□ -1.69
DDHD1-207ENST00000556027 ABCC9O60706 1549 aa4.52□□□□□ -1.69
DDHD1-207ENST00000556027 CLSTN1O94985 981 aa4.51□□□□□ -1.69
DDHD1-207ENST00000556027 PCDH10Q9P2E7 1040 aa4.51□□□□□ -1.69
DDHD1-207ENST00000556027 DHX37Q8IY37 1157 aaKnown RBP4.51□□□□□ -1.69
DDHD1-207ENST00000556027 NPM1P06748 294 aaKnown RBP eCLIP4.5□□□□□ -1.69
DDHD1-207ENST00000556027 USP35Q9P2H5 1018 aa4.5□□□□□ -1.69
DDHD1-207ENST00000556027 A0A0U1RQG5 324 aaPredicted RBP4.5□□□□□ -1.69
DDHD1-207ENST00000556027 PSMD1Q99460 953 aa4.5□□□□□ -1.69
DDHD1-207ENST00000556027 ARID4BQ4LE39 1312 aaPredicted RBP4.5□□□□□ -1.69
DDHD1-207ENST00000556027 E9PSI1 815 aa4.5□□□□□ -1.69
DDHD1-207ENST00000556027 RBM25P49756 843 aaKnown RBP4.5□□□□□ -1.69
DDHD1-207ENST00000556027 TMCO4Q5TGY1 634 aa4.49□□□□□ -1.69
DDHD1-207ENST00000556027 BRPF3Q9ULD4 1205 aa4.49□□□□□ -1.69
DDHD1-207ENST00000556027 WRNQ14191 1432 aaPredicted RBP eCLIP4.49□□□□□ -1.69
DDHD1-207ENST00000556027 DCAF11Q8TEB1 546 aa4.48□□□□□ -1.69
DDHD1-207ENST00000556027 STAC3Q96MF2 364 aa4.46□□□□□ -1.69
DDHD1-207ENST00000556027 VIRMAQ69YN4 1812 aaKnown RBP4.46□□□□□ -1.7
DDHD1-207ENST00000556027 APBB1O00213 710 aa4.46□□□□□ -1.7
DDHD1-207ENST00000556027 ITGAEP38570 1179 aa4.46□□□□□ -1.7
DDHD1-207ENST00000556027 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.46□□□□□ -1.7
DDHD1-207ENST00000556027 TICAM2Q86XR7 235 aa4.46□□□□□ -1.7
DDHD1-207ENST00000556027 NECTIN2Q92692 538 aa4.46□□□□□ -1.7
DDHD1-207ENST00000556027 PPM1GO15355 546 aaPredicted RBP4.45□□□□□ -1.7
DDHD1-207ENST00000556027 LMOD2Q6P5Q4 547 aa4.45□□□□□ -1.7
DDHD1-207ENST00000556027 P3H3Q8IVL6 736 aa4.45□□□□□ -1.7
DDHD1-207ENST00000556027 CENPJQ9HC77 1338 aaPredicted RBP4.45□□□□□ -1.7
DDHD1-207ENST00000556027 MYCNP04198 464 aaPredicted RBP4.45□□□□□ -1.7
DDHD1-207ENST00000556027 AEBP1Q8IUX7 1158 aa4.45□□□□□ -1.7
DDHD1-207ENST00000556027 CHGAP10645 457 aaKnown RBP4.44□□□□□ -1.7
DDHD1-207ENST00000556027 PTMSP20962 102 aa4.44□□□□□ -1.7
DDHD1-207ENST00000556027 IFNLR1Q8IU57 520 aaPredicted RBP4.44□□□□□ -1.7
DDHD1-207ENST00000556027 RRAGDQ9NQL2 400 aaPredicted RBP4.44□□□□□ -1.7
DDHD1-207ENST00000556027 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.44□□□□□ -1.7
DDHD1-207ENST00000556027 CANXP27824 592 aaKnown RBP4.44□□□□□ -1.7
DDHD1-207ENST00000556027 MTMR7Q9Y216 660 aa4.43□□□□□ -1.7
DDHD1-207ENST00000556027 MAPK8IP2Q13387 824 aaPredicted RBP4.43□□□□□ -1.7
DDHD1-207ENST00000556027 KCNG1Q9UIX4 513 aa4.43□□□□□ -1.7
DDHD1-207ENST00000556027 RNF216Q9NWF9 866 aaPredicted RBP4.43□□□□□ -1.7
DDHD1-207ENST00000556027 RGS22Q8NE09 1264 aa4.42□□□□□ -1.7
DDHD1-207ENST00000556027 TMEM51Q9NW97 253 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms