RNA–Protein interactions for RNA: ENST00000555470.1

PPP4R3A-209, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-209ENST00000555470 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
PPP4R3A-209ENST00000555470 C7P10643 843 aa12.42□□□□□ -0.42
PPP4R3A-209ENST00000555470 MAMSTRQ6ZN01 415 aa12.41□□□□□ -0.42
PPP4R3A-209ENST00000555470 ATMINO43313 823 aaPredicted RBP12.4□□□□□ -0.42
PPP4R3A-209ENST00000555470 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
PPP4R3A-209ENST00000555470 LCE2DQ5TA82 110 aaPredicted RBP12.4□□□□□ -0.42
PPP4R3A-209ENST00000555470 MS4A3Q96HJ5 214 aa12.39□□□□□ -0.43
PPP4R3A-209ENST00000555470 FAM163AQ96GL9 167 aaPredicted RBP12.3□□□□□ -0.44
PPP4R3A-209ENST00000555470 SCUBE2Q9NQ36 999 aa12.3□□□□□ -0.44
PPP4R3A-209ENST00000555470 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
PPP4R3A-209ENST00000555470 ATN1P54259 1190 aaPredicted RBP12.24□□□□□ -0.45
PPP4R3A-209ENST00000555470 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
PPP4R3A-209ENST00000555470 CCDC61Q9Y6R9 512 aa12.17□□□□□ -0.46
PPP4R3A-209ENST00000555470 TSPYL2Q9H2G4 693 aaPredicted RBP12.15□□□□□ -0.46
PPP4R3A-209ENST00000555470 KIF12Q96FN5 646 aa12.13□□□□□ -0.47
PPP4R3A-209ENST00000555470 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
PPP4R3A-209ENST00000555470 CDAN1Q8IWY9 1227 aa12.11□□□□□ -0.47
PPP4R3A-209ENST00000555470 TIE1P35590 1138 aa12.08□□□□□ -0.48
PPP4R3A-209ENST00000555470 TRPC6Q9Y210 931 aa12.08□□□□□ -0.48
PPP4R3A-209ENST00000555470 COLQQ9Y215 455 aaPredicted RBP12.03□□□□□ -0.48
PPP4R3A-209ENST00000555470 MAP3K13O43283 966 aa12.01□□□□□ -0.49
PPP4R3A-209ENST00000555470 SEC24BO95487 1268 aa12□□□□□ -0.49
PPP4R3A-209ENST00000555470 TTLL13PA6NNM8 815 aa11.98□□□□□ -0.49
PPP4R3A-209ENST00000555470 IER5LQ5T953 404 aa11.95□□□□□ -0.5
PPP4R3A-209ENST00000555470 ST18O60284 1047 aa11.94□□□□□ -0.5
PPP4R3A-209ENST00000555470 PROM2Q8N271 834 aa11.94□□□□□ -0.5
PPP4R3A-209ENST00000555470 TRIM35Q9UPQ4 493 aa11.9□□□□□ -0.5
PPP4R3A-209ENST00000555470 RASEFQ8IZ41 740 aa11.89□□□□□ -0.51
PPP4R3A-209ENST00000555470 SLAIN1Q8ND83 568 aa11.89□□□□□ -0.51
PPP4R3A-209ENST00000555470 MMRN1Q13201 1228 aa11.87□□□□□ -0.51
PPP4R3A-209ENST00000555470 SGIP1Q9BQI5 828 aa11.87□□□□□ -0.51
PPP4R3A-209ENST00000555470 SPNS2Q8IVW8 549 aa11.83□□□□□ -0.52
PPP4R3A-209ENST00000555470 PLEKHG5O94827 1062 aa11.82□□□□□ -0.52
PPP4R3A-209ENST00000555470 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
PPP4R3A-209ENST00000555470 TMEM121BQ9BXQ6 578 aaPredicted RBP11.79□□□□□ -0.52
PPP4R3A-209ENST00000555470 MIER1Q8N108 512 aa11.77□□□□□ -0.53
PPP4R3A-209ENST00000555470 PLCG2P16885 1265 aa11.75□□□□□ -0.53
PPP4R3A-209ENST00000555470 IRX5P78411 483 aaPredicted RBP11.72□□□□□ -0.53
PPP4R3A-209ENST00000555470 IFNL1Q8IU54 200 aa11.72□□□□□ -0.53
PPP4R3A-209ENST00000555470 TMEM106CQ9BVX2 250 aa11.71□□□□□ -0.53
PPP4R3A-209ENST00000555470 SNPHO15079 494 aa11.7□□□□□ -0.54
PPP4R3A-209ENST00000555470 NUBP1P53384 320 aa11.65□□□□□ -0.54
PPP4R3A-209ENST00000555470 MARVELD3Q96A59 401 aa11.64□□□□□ -0.55
PPP4R3A-209ENST00000555470 OCEL1Q9H607 264 aa11.63□□□□□ -0.55
PPP4R3A-209ENST00000555470 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.62□□□□□ -0.55
PPP4R3A-209ENST00000555470 PLCD3Q8N3E9 789 aa11.6□□□□□ -0.55
PPP4R3A-209ENST00000555470 ZBTB47Q9UFB7 747 aaPredicted RBP11.59□□□□□ -0.55
PPP4R3A-209ENST00000555470 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
PPP4R3A-209ENST00000555470 KRTAP3-3Q9BYR6 98 aa11.53□□□□□ -0.56
PPP4R3A-209ENST00000555470 KRTAP3-2Q9BYR7 98 aa11.53□□□□□ -0.56
PPP4R3A-209ENST00000555470 EMP3P54852 163 aa11.52□□□□□ -0.57
PPP4R3A-209ENST00000555470 POTEB3A0JP26 581 aa11.48□□□□□ -0.57
PPP4R3A-209ENST00000555470 FKBP8Q14318 412 aa11.48□□□□□ -0.57
PPP4R3A-209ENST00000555470 POTEBQ6S5H4 581 aa11.48□□□□□ -0.57
PPP4R3A-209ENST00000555470 HS3ST6Q96QI5 342 aa11.48□□□□□ -0.57
PPP4R3A-209ENST00000555470 PDCD7Q8N8D1 485 aaKnown RBP11.45□□□□□ -0.58
PPP4R3A-209ENST00000555470 C3orf67Q6ZVT6 689 aa11.44□□□□□ -0.58
PPP4R3A-209ENST00000555470 FAM205CA6NFA0 338 aa11.43□□□□□ -0.58
PPP4R3A-209ENST00000555470 PYGBP11216 843 aa11.41□□□□□ -0.58
PPP4R3A-209ENST00000555470 L3MBTL3Q96JM7 780 aaPredicted RBP11.4□□□□□ -0.58
PPP4R3A-209ENST00000555470 PCDHB8Q9UN66 801 aa11.4□□□□□ -0.58
PPP4R3A-209ENST00000555470 DCAF8Q5TAQ9 597 aa11.36□□□□□ -0.59
PPP4R3A-209ENST00000555470 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
PPP4R3A-209ENST00000555470 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
PPP4R3A-209ENST00000555470 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
PPP4R3A-209ENST00000555470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.27□□□□□ -0.613e-9■■■□□ 14.8
PPP4R3A-209ENST00000555470 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
PPP4R3A-209ENST00000555470 HOXB3P14651 431 aaPredicted RBP11.25□□□□□ -0.61
PPP4R3A-209ENST00000555470 ILDR1Q86SU0 546 aaPredicted RBP11.25□□□□□ -0.61
PPP4R3A-209ENST00000555470 RNF166Q96A37 237 aaPredicted RBP11.24□□□□□ -0.61
PPP4R3A-209ENST00000555470 HOXB1P14653 301 aaPredicted RBP11.22□□□□□ -0.61
PPP4R3A-209ENST00000555470 ERBB3P21860 1342 aa11.17□□□□□ -0.62
PPP4R3A-209ENST00000555470 PSEN1P49768 467 aa11.16□□□□□ -0.62
PPP4R3A-209ENST00000555470 DPY19L2Q6NUT2 758 aa11.16□□□□□ -0.62
PPP4R3A-209ENST00000555470 ZNF710Q8N1W2 664 aa11.16□□□□□ -0.62
PPP4R3A-209ENST00000555470 CHRM1P11229 460 aaPredicted RBP11.15□□□□□ -0.62
PPP4R3A-209ENST00000555470 GSE1Q14687 1217 aa11.15□□□□□ -0.62
PPP4R3A-209ENST00000555470 MYT1LQ9UL68 1186 aa11.15□□□□□ -0.62
PPP4R3A-209ENST00000555470 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
PPP4R3A-209ENST00000555470 DOK7Q18PE1 504 aa11.13□□□□□ -0.63
PPP4R3A-209ENST00000555470 G3V3G9 751 aa11.11□□□□□ -0.63
PPP4R3A-209ENST00000555470 VASPP50552 380 aaPredicted RBP11.08□□□□□ -0.64
PPP4R3A-209ENST00000555470 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
PPP4R3A-209ENST00000555470 KLHL34Q8N239 644 aa11.08□□□□□ -0.64
PPP4R3A-209ENST00000555470 PDAP1Q13442 181 aaKnown RBP11.06□□□□□ -0.64
PPP4R3A-209ENST00000555470 RIMBP2O15034 1052 aa11.05□□□□□ -0.64
PPP4R3A-209ENST00000555470 PTGER2P43116 358 aa11.05□□□□□ -0.64
PPP4R3A-209ENST00000555470 ZNF687Q8N1G0 1237 aa11.05□□□□□ -0.64
PPP4R3A-209ENST00000555470 CABP2Q9NPB3 220 aa11.03□□□□□ -0.64
PPP4R3A-209ENST00000555470 ZSWIM6Q9HCJ5 1215 aa11□□□□□ -0.65
PPP4R3A-209ENST00000555470 GPR153Q6NV75 609 aa10.94□□□□□ -0.66
PPP4R3A-209ENST00000555470 IFNLR1Q8IU57 520 aaPredicted RBP10.94□□□□□ -0.66
PPP4R3A-209ENST00000555470 TMEM92Q6UXU6 159 aa10.9□□□□□ -0.66
PPP4R3A-209ENST00000555470 SPOCK2Q92563 424 aa10.89□□□□□ -0.67
PPP4R3A-209ENST00000555470 ANKRD13DQ6ZTN6 518 aa10.88□□□□□ -0.67
PPP4R3A-209ENST00000555470 MICALL2Q8IY33 904 aa10.86□□□□□ -0.67
PPP4R3A-209ENST00000555470 EFCAB3Q8N7B9 438 aa10.83□□□□□ -0.68
PPP4R3A-209ENST00000555470 LSM11P83369 360 aaKnown RBP eCLIP10.82□□□□□ -0.68
PPP4R3A-209ENST00000555470 CIZ1Q9ULV3 898 aaPredicted RBP10.81□□□□□ -0.68
PPP4R3A-209ENST00000555470 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms