RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 CCDC180Q9P1Z9 1646 aa10.9□□□□□ -0.66
ATXN3-232ENST00000555381 NPM1P06748 294 aaKnown RBP eCLIP10.89□□□□□ -0.67
ATXN3-232ENST00000555381 MS4A3Q96HJ5 214 aa10.89□□□□□ -0.67
ATXN3-232ENST00000555381 METRNQ9UJH8 293 aa10.89□□□□□ -0.67
ATXN3-232ENST00000555381 MNX1P50219 401 aaPredicted RBP10.88□□□□□ -0.67
ATXN3-232ENST00000555381 LCE2DQ5TA82 110 aaPredicted RBP10.88□□□□□ -0.67
ATXN3-232ENST00000555381 ATMINO43313 823 aaPredicted RBP10.85□□□□□ -0.67
ATXN3-232ENST00000555381 ASTLQ6HA08 431 aaPredicted RBP10.84□□□□□ -0.67
ATXN3-232ENST00000555381 MAMSTRQ6ZN01 415 aa10.81□□□□□ -0.68
ATXN3-232ENST00000555381 C7P10643 843 aa10.8□□□□□ -0.68
ATXN3-232ENST00000555381 SLC39A7Q92504 469 aa10.8□□□□□ -0.68
ATXN3-232ENST00000555381 FAM163AQ96GL9 167 aaPredicted RBP10.79□□□□□ -0.68
ATXN3-232ENST00000555381 PROM2Q8N271 834 aa10.78□□□□□ -0.68
ATXN3-232ENST00000555381 TSPYL2Q9H2G4 693 aaPredicted RBP10.77□□□□□ -0.69
ATXN3-232ENST00000555381 ATN1P54259 1190 aaPredicted RBP10.75□□□□□ -0.69
ATXN3-232ENST00000555381 POTEFA5A3E0 1075 aa10.7□□□□□ -0.7
ATXN3-232ENST00000555381 TRPC6Q9Y210 931 aa10.69□□□□□ -0.7
ATXN3-232ENST00000555381 FKBP8Q14318 412 aa10.68□□□□□ -0.7
ATXN3-232ENST00000555381 SCUBE2Q9NQ36 999 aa10.68□□□□□ -0.7
ATXN3-232ENST00000555381 CCDC61Q9Y6R9 512 aa10.68□□□□□ -0.7
ATXN3-232ENST00000555381 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
ATXN3-232ENST00000555381 KIF12Q96FN5 646 aa10.65□□□□□ -0.7
ATXN3-232ENST00000555381 BMP2KQ9NSY1 1161 aaPredicted RBP10.65□□□□□ -0.7
ATXN3-232ENST00000555381 CDAN1Q8IWY9 1227 aa10.64□□□□□ -0.71
ATXN3-232ENST00000555381 MIER1Q8N108 512 aa10.64□□□□□ -0.71
ATXN3-232ENST00000555381 MAP3K13O43283 966 aa10.6□□□□□ -0.71
ATXN3-232ENST00000555381 COLQQ9Y215 455 aaPredicted RBP10.59□□□□□ -0.71
ATXN3-232ENST00000555381 RB1CC1Q8TDY2 1594 aa10.59□□□□□ -0.71
ATXN3-232ENST00000555381 RASEFQ8IZ41 740 aa10.56□□□□□ -0.72
ATXN3-232ENST00000555381 PLCD3Q8N3E9 789 aa10.56□□□□□ -0.72
ATXN3-232ENST00000555381 SEC24BO95487 1268 aa10.53□□□□□ -0.72
ATXN3-232ENST00000555381 DCAF8L2P0C7V8 631 aa10.53□□□□□ -0.72
ATXN3-232ENST00000555381 TIE1P35590 1138 aa10.53□□□□□ -0.72
ATXN3-232ENST00000555381 TTLL13PA6NNM8 815 aa10.51□□□□□ -0.73
ATXN3-232ENST00000555381 MMRN1Q13201 1228 aa10.48□□□□□ -0.73
ATXN3-232ENST00000555381 NACADO15069 1562 aa10.48□□□□□ -0.73
ATXN3-232ENST00000555381 ZBTB47Q9UFB7 747 aaPredicted RBP10.46□□□□□ -0.73
ATXN3-232ENST00000555381 TRIM35Q9UPQ4 493 aa10.45□□□□□ -0.74
ATXN3-232ENST00000555381 ST18O60284 1047 aa10.43□□□□□ -0.74
ATXN3-232ENST00000555381 SLAIN1Q8ND83 568 aa10.42□□□□□ -0.74
ATXN3-232ENST00000555381 NUBP1P53384 320 aa10.41□□□□□ -0.74
ATXN3-232ENST00000555381 SPNS2Q8IVW8 549 aa10.41□□□□□ -0.74
ATXN3-232ENST00000555381 PCDHB13Q9Y5F0 798 aa10.41□□□□□ -0.74
ATXN3-232ENST00000555381 IER5LQ5T953 404 aa10.38□□□□□ -0.75
ATXN3-232ENST00000555381 FAM212AQ96EL1 285 aa10.37□□□□□ -0.75
ATXN3-232ENST00000555381 SGIP1Q9BQI5 828 aa10.37□□□□□ -0.75
ATXN3-232ENST00000555381 IFNL1Q8IU54 200 aa10.35□□□□□ -0.75
ATXN3-232ENST00000555381 TMEM106CQ9BVX2 250 aa10.33□□□□□ -0.76
ATXN3-232ENST00000555381 PLCG2P16885 1265 aa10.3□□□□□ -0.76
ATXN3-232ENST00000555381 DCAF8Q5TAQ9 597 aa10.28□□□□□ -0.76
ATXN3-232ENST00000555381 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
ATXN3-232ENST00000555381 MYO15BQ96JP2 1530 aa10.27□□□□□ -0.77
ATXN3-232ENST00000555381 IRX5P78411 483 aaPredicted RBP10.26□□□□□ -0.77
ATXN3-232ENST00000555381 MARVELD3Q96A59 401 aa10.26□□□□□ -0.77
ATXN3-232ENST00000555381 BICRAQ9NZM4 1560 aa10.26□□□□□ -0.77
ATXN3-232ENST00000555381 TMEM121BQ9BXQ6 578 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-232ENST00000555381 DNAJC5Q9H3Z4 198 aa10.25□□□□□ -0.77
ATXN3-232ENST00000555381 PYGBP11216 843 aa10.24□□□□□ -0.77
ATXN3-232ENST00000555381 CECR2Q9BXF3 1484 aa10.22□□□□□ -0.77
ATXN3-232ENST00000555381 KLHL34Q8N239 644 aa10.19□□□□□ -0.78
ATXN3-232ENST00000555381 VASPP50552 380 aaPredicted RBP10.18□□□□□ -0.78
ATXN3-232ENST00000555381 OCEL1Q9H607 264 aa10.18□□□□□ -0.78
ATXN3-232ENST00000555381 PCDHB8Q9UN66 801 aa10.18□□□□□ -0.78
ATXN3-232ENST00000555381 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.17□□□□□ -0.78
ATXN3-232ENST00000555381 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
ATXN3-232ENST00000555381 SHROOM4Q9ULL8 1493 aa10.15□□□□□ -0.78
ATXN3-232ENST00000555381 SNPHO15079 494 aa10.14□□□□□ -0.79
ATXN3-232ENST00000555381 CC2D2AQ9P2K1 1620 aa10.12□□□□□ -0.79
ATXN3-232ENST00000555381 GSE1Q14687 1217 aa10.12□□□□□ -0.79
ATXN3-232ENST00000555381 POTEB3A0JP26 581 aa10.08□□□□□ -0.8
ATXN3-232ENST00000555381 EMP3P54852 163 aa10.08□□□□□ -0.8
ATXN3-232ENST00000555381 POTEBQ6S5H4 581 aa10.08□□□□□ -0.8
ATXN3-232ENST00000555381 IFNLR1Q8IU57 520 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-232ENST00000555381 ZNF467Q7Z7K2 595 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-232ENST00000555381 PDCD7Q8N8D1 485 aaKnown RBP10.06□□□□□ -0.8
ATXN3-232ENST00000555381 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
ATXN3-232ENST00000555381 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
ATXN3-232ENST00000555381 EIF4G1Q04637 1599 aaKnown RBP10.05□□□□□ -0.8
ATXN3-232ENST00000555381 GOLGA2Q08379 1002 aa10.05□□□□□ -0.8
ATXN3-232ENST00000555381 FAM205CA6NFA0 338 aa10.04□□□□□ -0.8
ATXN3-232ENST00000555381 MKRN3Q13064 507 aaKnown RBP10.03□□□□□ -0.8
ATXN3-232ENST00000555381 C3orf67Q6ZVT6 689 aa10.03□□□□□ -0.8
ATXN3-232ENST00000555381 HS3ST6Q96QI5 342 aa10.03□□□□□ -0.8
ATXN3-232ENST00000555381 DCAF1Q9Y4B6 1507 aa10.02□□□□□ -0.8
ATXN3-232ENST00000555381 CHRM1P11229 460 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-232ENST00000555381 PSEN1P49768 467 aa10□□□□□ -0.81
ATXN3-232ENST00000555381 ZCCHC6Q5VYS8 1495 aaKnown RBP9.99□□□□□ -0.81
ATXN3-232ENST00000555381 SCRIBQ14160 1630 aa9.97□□□□□ -0.81
ATXN3-232ENST00000555381 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.97□□□□□ -0.813e-6■■□□□ 13.5
ATXN3-232ENST00000555381 CIZ1Q9ULV3 898 aaPredicted RBP9.97□□□□□ -0.81
ATXN3-232ENST00000555381 SPOCK2Q92563 424 aa9.96□□□□□ -0.82
ATXN3-232ENST00000555381 L3MBTL3Q96JM7 780 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-232ENST00000555381 PDAP1Q13442 181 aaKnown RBP9.94□□□□□ -0.82
ATXN3-232ENST00000555381 DPY19L2Q6NUT2 758 aa9.92□□□□□ -0.82
ATXN3-232ENST00000555381 CABP2Q9NPB3 220 aa9.9□□□□□ -0.82
ATXN3-232ENST00000555381 HOXB3P14651 431 aaPredicted RBP9.87□□□□□ -0.83
ATXN3-232ENST00000555381 G3V3G9 751 aa9.85□□□□□ -0.83
ATXN3-232ENST00000555381 CUX2O14529 1486 aa9.85□□□□□ -0.83
ATXN3-232ENST00000555381 ILDR1Q86SU0 546 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-232ENST00000555381 BOLA1Q9Y3E2 137 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms