RNA–Protein interactions for RNA: ENST00000555010.1

FOXN3-207, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-207ENST00000555010 PAK3O75914 559 aaPredicted RBP6.65□□□□□ -1.34
FOXN3-207ENST00000555010 PHF12Q96QT6 1004 aa6.65□□□□□ -1.34
FOXN3-207ENST00000555010 CIZ1Q9ULV3 898 aaPredicted RBP6.64□□□□□ -1.35
FOXN3-207ENST00000555010 SP7Q8TDD2 431 aaPredicted RBP6.62□□□□□ -1.35
FOXN3-207ENST00000555010 FAM212AQ96EL1 285 aa6.61□□□□□ -1.35
FOXN3-207ENST00000555010 GABBR2O75899 941 aa6.6□□□□□ -1.35
FOXN3-207ENST00000555010 CCDC61Q9Y6R9 512 aa6.6□□□□□ -1.35
FOXN3-207ENST00000555010 PYGBP11216 843 aa6.59□□□□□ -1.35
FOXN3-207ENST00000555010 ZNF579Q8NAF0 562 aaKnown RBP6.58□□□□□ -1.36
FOXN3-207ENST00000555010 MAP3K13O43283 966 aa6.56□□□□□ -1.36
FOXN3-207ENST00000555010 GSE1Q14687 1217 aa6.56□□□□□ -1.36
FOXN3-207ENST00000555010 GALR2O43603 387 aaPredicted RBP6.55□□□□□ -1.36
FOXN3-207ENST00000555010 KIF12Q96FN5 646 aa6.55□□□□□ -1.36
FOXN3-207ENST00000555010 MS4A3Q96HJ5 214 aa6.54□□□□□ -1.36
FOXN3-207ENST00000555010 PCDHB8Q9UN66 801 aa6.52□□□□□ -1.37
FOXN3-207ENST00000555010 TRPC6Q9Y210 931 aa6.52□□□□□ -1.37
FOXN3-207ENST00000555010 PCDHB13Q9Y5F0 798 aa6.52□□□□□ -1.37
FOXN3-207ENST00000555010 PKD2Q13563 968 aa6.5□□□□□ -1.37
FOXN3-207ENST00000555010 IFNL1Q8IU54 200 aa6.5□□□□□ -1.37
FOXN3-207ENST00000555010 ECM2O94769 699 aaPredicted RBP6.49□□□□□ -1.37
FOXN3-207ENST00000555010 POTEIP0CG38 1075 aa6.47□□□□□ -1.37
FOXN3-207ENST00000555010 DCBLD2Q96PD2 775 aa6.47□□□□□ -1.37
FOXN3-207ENST00000555010 CHRM1P11229 460 aaPredicted RBP6.46□□□□□ -1.38
FOXN3-207ENST00000555010 RGL2O15211 777 aa6.44□□□□□ -1.38
FOXN3-207ENST00000555010 CLCN6P51797 869 aa6.44□□□□□ -1.38
FOXN3-207ENST00000555010 PELP1Q8IZL8 1130 aaKnown RBP6.43□□□□□ -1.38
FOXN3-207ENST00000555010 RNF25Q96BH1 459 aaPredicted RBP6.43□□□□□ -1.38
FOXN3-207ENST00000555010 RTN4Q9NQC3 1192 aaKnown RBP6.43□□□□□ -1.38
FOXN3-207ENST00000555010 RB1CC1Q8TDY2 1594 aa6.43□□□□□ -1.38
FOXN3-207ENST00000555010 ATN1P54259 1190 aaPredicted RBP6.42□□□□□ -1.38
FOXN3-207ENST00000555010 SGIP1Q9BQI5 828 aa6.42□□□□□ -1.38
FOXN3-207ENST00000555010 BMP2KQ9NSY1 1161 aaPredicted RBP6.42□□□□□ -1.38
FOXN3-207ENST00000555010 ATMINO43313 823 aaPredicted RBP6.41□□□□□ -1.38
FOXN3-207ENST00000555010 ZNF467Q7Z7K2 595 aaPredicted RBP6.41□□□□□ -1.38
FOXN3-207ENST00000555010 TRIM41Q8WV44 630 aa6.41□□□□□ -1.38
FOXN3-207ENST00000555010 TMEM106CQ9BVX2 250 aa6.41□□□□□ -1.38
FOXN3-207ENST00000555010 TTLL13PA6NNM8 815 aa6.4□□□□□ -1.38
FOXN3-207ENST00000555010 PSEN1P49768 467 aa6.4□□□□□ -1.38
FOXN3-207ENST00000555010 RIOK3O14730 519 aaKnown RBP6.39□□□□□ -1.39
FOXN3-207ENST00000555010 DCAF8L2P0C7V8 631 aa6.39□□□□□ -1.39
FOXN3-207ENST00000555010 UNC13AQ9UPW8 1703 aa6.39□□□□□ -1.39
FOXN3-207ENST00000555010 TIE1P35590 1138 aa6.38□□□□□ -1.39
FOXN3-207ENST00000555010 PDAP1Q13442 181 aaKnown RBP6.37□□□□□ -1.39
FOXN3-207ENST00000555010 ASTLQ6HA08 431 aaPredicted RBP6.37□□□□□ -1.39
FOXN3-207ENST00000555010 TRIM35Q9UPQ4 493 aa6.37□□□□□ -1.39
FOXN3-207ENST00000555010 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.36□□□□□ -1.39
FOXN3-207ENST00000555010 ZFP91Q96JP5 570 aaPredicted RBP6.36□□□□□ -1.39
FOXN3-207ENST00000555010 AMER1Q5JTC6 1135 aaPredicted RBP6.35□□□□□ -1.39
FOXN3-207ENST00000555010 CABP2Q9NPB3 220 aa6.35□□□□□ -1.39
FOXN3-207ENST00000555010 NACADO15069 1562 aa6.35□□□□□ -1.39
FOXN3-207ENST00000555010 VGFO15240 615 aaPredicted RBP6.34□□□□□ -1.39
FOXN3-207ENST00000555010 STK24Q9Y6E0 443 aa6.33□□□□□ -1.4
FOXN3-207ENST00000555010 STK25O00506 426 aa6.32□□□□□ -1.4
FOXN3-207ENST00000555010 GOLGA2Q08379 1002 aa6.32□□□□□ -1.4
FOXN3-207ENST00000555010 BICRAQ9NZM4 1560 aa6.31□□□□□ -1.4
FOXN3-207ENST00000555010 CHGAP10645 457 aaKnown RBP6.31□□□□□ -1.4
FOXN3-207ENST00000555010 EFCAB3Q8N7B9 438 aa6.31□□□□□ -1.4
FOXN3-207ENST00000555010 BCL11BQ9C0K0 894 aaPredicted RBP6.31□□□□□ -1.4
FOXN3-207ENST00000555010 METRNQ9UJH8 293 aa6.31□□□□□ -1.4
FOXN3-207ENST00000555010 COLQQ9Y215 455 aaPredicted RBP6.31□□□□□ -1.4
FOXN3-207ENST00000555010 POTEFA5A3E0 1075 aa6.3□□□□□ -1.4
FOXN3-207ENST00000555010 MKRN3Q13064 507 aaKnown RBP6.3□□□□□ -1.4
FOXN3-207ENST00000555010 SLC39A7Q92504 469 aa6.3□□□□□ -1.4
FOXN3-207ENST00000555010 SEC24BO95487 1268 aa6.29□□□□□ -1.4
FOXN3-207ENST00000555010 POTEB2H3BUK9 544 aa6.28□□□□□ -1.4
FOXN3-207ENST00000555010 C7P10643 843 aa6.28□□□□□ -1.4
FOXN3-207ENST00000555010 TAOK2Q9UL54 1235 aa6.28□□□□□ -1.4
FOXN3-207ENST00000555010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.27□□□□□ -1.419e-6■□□□□ 9.4
FOXN3-207ENST00000555010 PLCG2P16885 1265 aa6.25□□□□□ -1.41
FOXN3-207ENST00000555010 IRX5P78411 483 aaPredicted RBP6.25□□□□□ -1.41
FOXN3-207ENST00000555010 LHX8Q68G74 356 aa6.25□□□□□ -1.41
FOXN3-207ENST00000555010 DPY19L2Q6NUT2 758 aa6.25□□□□□ -1.41
FOXN3-207ENST00000555010 PHF8Q9UPP1 1060 aa6.25□□□□□ -1.41
FOXN3-207ENST00000555010 IER5LQ5T953 404 aa6.24□□□□□ -1.41
FOXN3-207ENST00000555010 DNAJC5Q9H3Z4 198 aa6.24□□□□□ -1.41
FOXN3-207ENST00000555010 POTEJP0CG39 1038 aa6.23□□□□□ -1.41
FOXN3-207ENST00000555010 OCEL1Q9H607 264 aa6.23□□□□□ -1.41
FOXN3-207ENST00000555010 HS6ST3Q8IZP7 471 aa6.22□□□□□ -1.41
FOXN3-207ENST00000555010 CC2D2AQ9P2K1 1620 aa6.21□□□□□ -1.41
FOXN3-207ENST00000555010 PDCD7Q8N8D1 485 aaKnown RBP6.21□□□□□ -1.42
FOXN3-207ENST00000555010 MYO15BQ96JP2 1530 aa6.2□□□□□ -1.42
FOXN3-207ENST00000555010 SOX12O15370 315 aa6.2□□□□□ -1.42
FOXN3-207ENST00000555010 NKX1-1Q15270 411 aaPredicted RBP6.2□□□□□ -1.42
FOXN3-207ENST00000555010 MFRPQ9BY79 579 aa6.2□□□□□ -1.42
FOXN3-207ENST00000555010 MS4A4AQ96JQ5 239 aa6.19□□□□□ -1.42
FOXN3-207ENST00000555010 CECR2Q9BXF3 1484 aa6.19□□□□□ -1.42
FOXN3-207ENST00000555010 NLRP6P59044 892 aa6.18□□□□□ -1.42
FOXN3-207ENST00000555010 PPP1R37O75864 691 aa6.17□□□□□ -1.42
FOXN3-207ENST00000555010 FBXO22Q8NEZ5 403 aa6.17□□□□□ -1.42
FOXN3-207ENST00000555010 ILDR1Q86SU0 546 aaPredicted RBP6.16□□□□□ -1.42
FOXN3-207ENST00000555010 OTUD5Q96G74 571 aa6.16□□□□□ -1.42
FOXN3-207ENST00000555010 G3V3G9 751 aa6.14□□□□□ -1.43
FOXN3-207ENST00000555010 SHROOM4Q9ULL8 1493 aa6.14□□□□□ -1.43
FOXN3-207ENST00000555010 EIF4G1Q04637 1599 aaKnown RBP6.14□□□□□ -1.43
FOXN3-207ENST00000555010 L3MBTL3Q96JM7 780 aaPredicted RBP6.13□□□□□ -1.43
FOXN3-207ENST00000555010 BOLA1Q9Y3E2 137 aa6.13□□□□□ -1.43
FOXN3-207ENST00000555010 GTPBP6O43824 516 aaPredicted RBP6.12□□□□□ -1.43
FOXN3-207ENST00000555010 BBXQ8WY36 941 aaPredicted RBP6.12□□□□□ -1.43
FOXN3-207ENST00000555010 CFAP44Q96MT7 982 aa6.12□□□□□ -1.43
FOXN3-207ENST00000555010 SCUBE2Q9NQ36 999 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms