RNA–Protein interactions for RNA: ENST00000554821.1

CFAP54-207, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-207ENST00000554821 SCUBE2Q9NQ36 999 aa11.93□□□□□ -0.5
CFAP54-207ENST00000554821 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
CFAP54-207ENST00000554821 PHF12Q96QT6 1004 aa11.91□□□□□ -0.5
CFAP54-207ENST00000554821 SPDYE4A6NLX3 237 aa11.9□□□□□ -0.5
CFAP54-207ENST00000554821 CDAN1Q8IWY9 1227 aa11.9□□□□□ -0.5
CFAP54-207ENST00000554821 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
CFAP54-207ENST00000554821 ATMINO43313 823 aaPredicted RBP11.85□□□□□ -0.51
CFAP54-207ENST00000554821 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
CFAP54-207ENST00000554821 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
CFAP54-207ENST00000554821 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
CFAP54-207ENST00000554821 PROM2Q8N271 834 aa11.69□□□□□ -0.54
CFAP54-207ENST00000554821 NPM1P06748 294 aaKnown RBP eCLIP11.68□□□□□ -0.54
CFAP54-207ENST00000554821 SPNS2Q8IVW8 549 aa11.65□□□□□ -0.54
CFAP54-207ENST00000554821 ATN1P54259 1190 aaPredicted RBP11.64□□□□□ -0.55
CFAP54-207ENST00000554821 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
CFAP54-207ENST00000554821 FKBP8Q14318 412 aa11.6□□□□□ -0.55
CFAP54-207ENST00000554821 ST18O60284 1047 aa11.56□□□□□ -0.56
CFAP54-207ENST00000554821 MNX1P50219 401 aaPredicted RBP11.55□□□□□ -0.56
CFAP54-207ENST00000554821 BMP2KQ9NSY1 1161 aaPredicted RBP11.49□□□□□ -0.57
CFAP54-207ENST00000554821 PLEKHG5O94827 1062 aa11.45□□□□□ -0.58
CFAP54-207ENST00000554821 TIE1P35590 1138 aa11.44□□□□□ -0.58
CFAP54-207ENST00000554821 TMEM121BQ9BXQ6 578 aaPredicted RBP11.44□□□□□ -0.58
CFAP54-207ENST00000554821 FBXO3Q9UK99 471 aa11.44□□□□□ -0.58
CFAP54-207ENST00000554821 SEC24BO95487 1268 aa11.43□□□□□ -0.58
CFAP54-207ENST00000554821 COLQQ9Y215 455 aaPredicted RBP11.43□□□□□ -0.58
CFAP54-207ENST00000554821 SLAIN1Q8ND83 568 aa11.42□□□□□ -0.58
CFAP54-207ENST00000554821 CCDC61Q9Y6R9 512 aa11.41□□□□□ -0.58
CFAP54-207ENST00000554821 KIF12Q96FN5 646 aa11.4□□□□□ -0.58
CFAP54-207ENST00000554821 IER5LQ5T953 404 aa11.36□□□□□ -0.59
CFAP54-207ENST00000554821 TRPC6Q9Y210 931 aa11.36□□□□□ -0.59
CFAP54-207ENST00000554821 TSPYL2Q9H2G4 693 aaPredicted RBP11.34□□□□□ -0.59
CFAP54-207ENST00000554821 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
CFAP54-207ENST00000554821 TTLL13PA6NNM8 815 aa11.31□□□□□ -0.6
CFAP54-207ENST00000554821 MIER1Q8N108 512 aa11.31□□□□□ -0.6
CFAP54-207ENST00000554821 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
CFAP54-207ENST00000554821 SNPHO15079 494 aa11.27□□□□□ -0.61
CFAP54-207ENST00000554821 MAP3K13O43283 966 aa11.24□□□□□ -0.61
CFAP54-207ENST00000554821 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
CFAP54-207ENST00000554821 MARVELD3Q96A59 401 aa11.21□□□□□ -0.61
CFAP54-207ENST00000554821 VASPP50552 380 aaPredicted RBP11.18□□□□□ -0.62
CFAP54-207ENST00000554821 KRTAP3-3Q9BYR6 98 aa11.17□□□□□ -0.62
CFAP54-207ENST00000554821 KRTAP3-2Q9BYR7 98 aa11.17□□□□□ -0.62
CFAP54-207ENST00000554821 PLCG2P16885 1265 aa11.14□□□□□ -0.63
CFAP54-207ENST00000554821 SGIP1Q9BQI5 828 aa11.12□□□□□ -0.63
CFAP54-207ENST00000554821 EMP3P54852 163 aa11.1□□□□□ -0.63
CFAP54-207ENST00000554821 IRX5P78411 483 aaPredicted RBP11.06□□□□□ -0.64
CFAP54-207ENST00000554821 HS3ST6Q96QI5 342 aa11.06□□□□□ -0.64
CFAP54-207ENST00000554821 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.06□□□□□ -0.64
CFAP54-207ENST00000554821 KLHL34Q8N239 644 aa11.05□□□□□ -0.64
CFAP54-207ENST00000554821 FAM212AQ96EL1 285 aa11.05□□□□□ -0.64
CFAP54-207ENST00000554821 POTEB3A0JP26 581 aa11.02□□□□□ -0.65
CFAP54-207ENST00000554821 NUBP1P53384 320 aa11.02□□□□□ -0.65
CFAP54-207ENST00000554821 POTEBQ6S5H4 581 aa11.02□□□□□ -0.65
CFAP54-207ENST00000554821 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
CFAP54-207ENST00000554821 PCDHB13Q9Y5F0 798 aa11.01□□□□□ -0.65
CFAP54-207ENST00000554821 FAM205CA6NFA0 338 aa10.98□□□□□ -0.65
CFAP54-207ENST00000554821 TMEM106CQ9BVX2 250 aa10.97□□□□□ -0.65
CFAP54-207ENST00000554821 OCEL1Q9H607 264 aa10.97□□□□□ -0.65
CFAP54-207ENST00000554821 GSE1Q14687 1217 aa10.96□□□□□ -0.65
CFAP54-207ENST00000554821 RNF166Q96A37 237 aaPredicted RBP10.96□□□□□ -0.65
CFAP54-207ENST00000554821 SPOCK2Q92563 424 aa10.95□□□□□ -0.66
CFAP54-207ENST00000554821 IFNLR1Q8IU57 520 aaPredicted RBP10.92□□□□□ -0.66
CFAP54-207ENST00000554821 DCAF8Q5TAQ9 597 aa10.9□□□□□ -0.66
CFAP54-207ENST00000554821 IFNL1Q8IU54 200 aa10.9□□□□□ -0.66
CFAP54-207ENST00000554821 TRIM41Q8WV44 630 aa10.84□□□□□ -0.67
CFAP54-207ENST00000554821 C3orf67Q6ZVT6 689 aa10.83□□□□□ -0.68
CFAP54-207ENST00000554821 CHRM1P11229 460 aaPredicted RBP10.81□□□□□ -0.68
CFAP54-207ENST00000554821 MYT1LQ9UL68 1186 aa10.81□□□□□ -0.68
CFAP54-207ENST00000554821 ZNF467Q7Z7K2 595 aaPredicted RBP10.77□□□□□ -0.69
CFAP54-207ENST00000554821 CIZ1Q9ULV3 898 aaPredicted RBP10.77□□□□□ -0.69
CFAP54-207ENST00000554821 PYGBP11216 843 aa10.76□□□□□ -0.69
CFAP54-207ENST00000554821 L3MBTL3Q96JM7 780 aaPredicted RBP10.75□□□□□ -0.69
CFAP54-207ENST00000554821 PDCD7Q8N8D1 485 aaKnown RBP10.72□□□□□ -0.69
CFAP54-207ENST00000554821 PTGER2P43116 358 aa10.71□□□□□ -0.69
CFAP54-207ENST00000554821 HOXB1P14653 301 aaPredicted RBP10.68□□□□□ -0.7
CFAP54-207ENST00000554821 ERBB3P21860 1342 aa10.66□□□□□ -0.7
CFAP54-207ENST00000554821 HOXB3P14651 431 aaPredicted RBP10.64□□□□□ -0.71
CFAP54-207ENST00000554821 PDAP1Q13442 181 aaKnown RBP10.62□□□□□ -0.71
CFAP54-207ENST00000554821 PCDHB8Q9UN66 801 aa10.62□□□□□ -0.71
CFAP54-207ENST00000554821 TAOK2Q9UL54 1235 aa10.6□□□□□ -0.71
CFAP54-207ENST00000554821 ZNF710Q8N1W2 664 aa10.59□□□□□ -0.71
CFAP54-207ENST00000554821 PSEN1P49768 467 aa10.57□□□□□ -0.72
CFAP54-207ENST00000554821 GOLGA2Q08379 1002 aa10.56□□□□□ -0.72
CFAP54-207ENST00000554821 VARS2Q5ST30 1063 aaKnown RBP10.56□□□□□ -0.72
CFAP54-207ENST00000554821 RIOK3O14730 519 aaKnown RBP10.55□□□□□ -0.72
CFAP54-207ENST00000554821 DOK7Q18PE1 504 aa10.55□□□□□ -0.72
CFAP54-207ENST00000554821 ZNF687Q8N1G0 1237 aa10.55□□□□□ -0.72
CFAP54-207ENST00000554821 MKRN3Q13064 507 aaKnown RBP10.54□□□□□ -0.72
CFAP54-207ENST00000554821 PLA2G2EQ9NZK7 142 aa10.52□□□□□ -0.73
CFAP54-207ENST00000554821 VGFO15240 615 aaPredicted RBP10.51□□□□□ -0.73
CFAP54-207ENST00000554821 ECM2O94769 699 aaPredicted RBP10.5□□□□□ -0.73
CFAP54-207ENST00000554821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.5□□□□□ -0.73
CFAP54-207ENST00000554821 RIMBP2O15034 1052 aa10.48□□□□□ -0.73
CFAP54-207ENST00000554821 ILDR1Q86SU0 546 aaPredicted RBP10.46□□□□□ -0.73
CFAP54-207ENST00000554821 PKD2Q13563 968 aa10.44□□□□□ -0.74
CFAP54-207ENST00000554821 RNF25Q96BH1 459 aaPredicted RBP10.44□□□□□ -0.74
CFAP54-207ENST00000554821 ZSWIM6Q9HCJ5 1215 aa10.42□□□□□ -0.74
CFAP54-207ENST00000554821 CABP2Q9NPB3 220 aa10.41□□□□□ -0.74
CFAP54-207ENST00000554821 G3V3G9 751 aa10.4□□□□□ -0.74
CFAP54-207ENST00000554821 BOLA1Q9Y3E2 137 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms