RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
ATXN3-229ENST00000554672 RASEFQ8IZ41 740 aa10.48□□□□□ -0.73
ATXN3-229ENST00000554672 CCDC61Q9Y6R9 512 aa10.48□□□□□ -0.73
ATXN3-229ENST00000554672 NACADO15069 1562 aa10.48□□□□□ -0.73
ATXN3-229ENST00000554672 DCBLD2Q96PD2 775 aa10.45□□□□□ -0.74
ATXN3-229ENST00000554672 NUBP1P53384 320 aa10.43□□□□□ -0.74
ATXN3-229ENST00000554672 FBXO3Q9UK99 471 aa10.43□□□□□ -0.74
ATXN3-229ENST00000554672 MS4A3Q96HJ5 214 aa10.42□□□□□ -0.74
ATXN3-229ENST00000554672 KIF12Q96FN5 646 aa10.4□□□□□ -0.74
ATXN3-229ENST00000554672 LHX8Q68G74 356 aa10.38□□□□□ -0.75
ATXN3-229ENST00000554672 ZBTB47Q9UFB7 747 aaPredicted RBP10.37□□□□□ -0.75
ATXN3-229ENST00000554672 VASPP50552 380 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-229ENST00000554672 PELP1Q8IZL8 1130 aaKnown RBP10.36□□□□□ -0.75
ATXN3-229ENST00000554672 MAP3K13O43283 966 aa10.34□□□□□ -0.75
ATXN3-229ENST00000554672 TRPC6Q9Y210 931 aa10.32□□□□□ -0.76
ATXN3-229ENST00000554672 ASTLQ6HA08 431 aaPredicted RBP10.31□□□□□ -0.76
ATXN3-229ENST00000554672 ATMINO43313 823 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-229ENST00000554672 FAM212AQ96EL1 285 aa10.27□□□□□ -0.77
ATXN3-229ENST00000554672 MYO15BQ96JP2 1530 aa10.27□□□□□ -0.77
ATXN3-229ENST00000554672 POTEB2H3BUK9 544 aa10.26□□□□□ -0.77
ATXN3-229ENST00000554672 BICRAQ9NZM4 1560 aa10.26□□□□□ -0.77
ATXN3-229ENST00000554672 ATN1P54259 1190 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-229ENST00000554672 DNAJC5Q9H3Z4 198 aa10.25□□□□□ -0.77
ATXN3-229ENST00000554672 BMP2KQ9NSY1 1161 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-229ENST00000554672 DCAF8Q5TAQ9 597 aa10.23□□□□□ -0.77
ATXN3-229ENST00000554672 IFNLR1Q8IU57 520 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-229ENST00000554672 KLHL34Q8N239 644 aa10.23□□□□□ -0.77
ATXN3-229ENST00000554672 PCDHB13Q9Y5F0 798 aa10.23□□□□□ -0.77
ATXN3-229ENST00000554672 IFNL1Q8IU54 200 aa10.22□□□□□ -0.77
ATXN3-229ENST00000554672 SGIP1Q9BQI5 828 aa10.22□□□□□ -0.77
ATXN3-229ENST00000554672 CECR2Q9BXF3 1484 aa10.22□□□□□ -0.77
ATXN3-229ENST00000554672 TIE1P35590 1138 aa10.2□□□□□ -0.78
ATXN3-229ENST00000554672 TTLL13PA6NNM8 815 aa10.18□□□□□ -0.78
ATXN3-229ENST00000554672 PYGBP11216 843 aa10.18□□□□□ -0.78
ATXN3-229ENST00000554672 METRNQ9UJH8 293 aa10.18□□□□□ -0.78
ATXN3-229ENST00000554672 C7P10643 843 aa10.17□□□□□ -0.78
ATXN3-229ENST00000554672 SLC39A7Q92504 469 aa10.17□□□□□ -0.78
ATXN3-229ENST00000554672 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
ATXN3-229ENST00000554672 POTEFA5A3E0 1075 aa10.15□□□□□ -0.78
ATXN3-229ENST00000554672 POTEJP0CG39 1038 aa10.15□□□□□ -0.78
ATXN3-229ENST00000554672 OTUD5Q96G74 571 aa10.15□□□□□ -0.78
ATXN3-229ENST00000554672 SHROOM4Q9ULL8 1493 aa10.15□□□□□ -0.78
ATXN3-229ENST00000554672 CC2D2AQ9P2K1 1620 aa10.12□□□□□ -0.79
ATXN3-229ENST00000554672 GSE1Q14687 1217 aa10.12□□□□□ -0.79
ATXN3-229ENST00000554672 SPOCK2Q92563 424 aa10.12□□□□□ -0.79
ATXN3-229ENST00000554672 PCDHB8Q9UN66 801 aa10.11□□□□□ -0.79
ATXN3-229ENST00000554672 TRIM35Q9UPQ4 493 aa10.09□□□□□ -0.79
ATXN3-229ENST00000554672 CHRM1P11229 460 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-229ENST00000554672 TMEM106CQ9BVX2 250 aa10.08□□□□□ -0.8
ATXN3-229ENST00000554672 COLQQ9Y215 455 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-229ENST00000554672 EIF4G1Q04637 1599 aaKnown RBP10.05□□□□□ -0.8
ATXN3-229ENST00000554672 DCAF1Q9Y4B6 1507 aa10.02□□□□□ -0.8
ATXN3-229ENST00000554672 IER5LQ5T953 404 aa10.02□□□□□ -0.81
ATXN3-229ENST00000554672 CIZ1Q9ULV3 898 aaPredicted RBP10.02□□□□□ -0.81
ATXN3-229ENST00000554672 ZCCHC6Q5VYS8 1495 aaKnown RBP9.99□□□□□ -0.81
ATXN3-229ENST00000554672 SEC24BO95487 1268 aa9.99□□□□□ -0.81
ATXN3-229ENST00000554672 ZNF467Q7Z7K2 595 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-229ENST00000554672 SCRIBQ14160 1630 aa9.97□□□□□ -0.81
ATXN3-229ENST00000554672 IRX5P78411 483 aaPredicted RBP9.97□□□□□ -0.81
ATXN3-229ENST00000554672 MAMSTRQ6ZN01 415 aa9.95□□□□□ -0.82
ATXN3-229ENST00000554672 PSEN1P49768 467 aa9.94□□□□□ -0.82
ATXN3-229ENST00000554672 SCUBE2Q9NQ36 999 aa9.91□□□□□ -0.82
ATXN3-229ENST00000554672 OCEL1Q9H607 264 aa9.9□□□□□ -0.82
ATXN3-229ENST00000554672 PLCG2P16885 1265 aa9.89□□□□□ -0.83
ATXN3-229ENST00000554672 PDAP1Q13442 181 aaKnown RBP9.89□□□□□ -0.83
ATXN3-229ENST00000554672 PDCD7Q8N8D1 485 aaKnown RBP9.87□□□□□ -0.83
ATXN3-229ENST00000554672 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
ATXN3-229ENST00000554672 RNF25Q96BH1 459 aaPredicted RBP9.85□□□□□ -0.83
ATXN3-229ENST00000554672 CUX2O14529 1486 aa9.85□□□□□ -0.83
ATXN3-229ENST00000554672 LCE2DQ5TA82 110 aaPredicted RBP9.83□□□□□ -0.84
ATXN3-229ENST00000554672 MKRN3Q13064 507 aaKnown RBP9.82□□□□□ -0.84
ATXN3-229ENST00000554672 ILDR1Q86SU0 546 aaPredicted RBP9.82□□□□□ -0.84
ATXN3-229ENST00000554672 GOLGA2Q08379 1002 aa9.81□□□□□ -0.84
ATXN3-229ENST00000554672 CABP2Q9NPB3 220 aa9.81□□□□□ -0.84
ATXN3-229ENST00000554672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.79□□□□□ -0.843e-6■■□□□ 13.5
ATXN3-229ENST00000554672 ERCC6Q03468 1493 aa9.78□□□□□ -0.84
ATXN3-229ENST00000554672 RIOK3O14730 519 aaKnown RBP9.77□□□□□ -0.85
ATXN3-229ENST00000554672 DPY19L2Q6NUT2 758 aa9.77□□□□□ -0.85
ATXN3-229ENST00000554672 SLAIN1Q8ND83 568 aa9.77□□□□□ -0.85
ATXN3-229ENST00000554672 FAM163AQ96GL9 167 aaPredicted RBP9.77□□□□□ -0.85
ATXN3-229ENST00000554672 POTEMA6NI47 508 aa9.75□□□□□ -0.85
ATXN3-229ENST00000554672 NCAPD3P42695 1498 aa9.74□□□□□ -0.85
ATXN3-229ENST00000554672 POTEGQ6S5H5 508 aa9.74□□□□□ -0.85
ATXN3-229ENST00000554672 EFCAB3Q8N7B9 438 aa9.74□□□□□ -0.85
ATXN3-229ENST00000554672 PLSCR2Q9NRY7 297 aa9.74□□□□□ -0.85
ATXN3-229ENST00000554672 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-229ENST00000554672 PKD2Q13563 968 aa9.73□□□□□ -0.85
ATXN3-229ENST00000554672 ZFP91Q96JP5 570 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-229ENST00000554672 VGFO15240 615 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-229ENST00000554672 L3MBTL3Q96JM7 780 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-229ENST00000554672 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.7□□□□□ -0.86
ATXN3-229ENST00000554672 ECM2O94769 699 aaPredicted RBP9.67□□□□□ -0.86
ATXN3-229ENST00000554672 RGL2O15211 777 aa9.65□□□□□ -0.86
ATXN3-229ENST00000554672 ST18O60284 1047 aa9.65□□□□□ -0.86
ATXN3-229ENST00000554672 ATAD2BQ9ULI0 1458 aa9.65□□□□□ -0.87
ATXN3-229ENST00000554672 C3orf67Q6ZVT6 689 aa9.64□□□□□ -0.87
ATXN3-229ENST00000554672 MS4A4AQ96JQ5 239 aa9.64□□□□□ -0.87
ATXN3-229ENST00000554672 BOLA1Q9Y3E2 137 aa9.64□□□□□ -0.87
ATXN3-229ENST00000554672 SOX12O15370 315 aa9.63□□□□□ -0.87
ATXN3-229ENST00000554672 TMEM121BQ9BXQ6 578 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms