RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 C7P10643 843 aa7.78□□□□□ -1.16
IFT43-208ENST00000554423 SLC39A7Q92504 469 aa7.78□□□□□ -1.16
IFT43-208ENST00000554423 PHF12Q96QT6 1004 aa7.78□□□□□ -1.16
IFT43-208ENST00000554423 SPDYE4A6NLX3 237 aa7.75□□□□□ -1.17
IFT43-208ENST00000554423 ASTLQ6HA08 431 aaPredicted RBP7.72□□□□□ -1.17
IFT43-208ENST00000554423 ATMINO43313 823 aaPredicted RBP7.7□□□□□ -1.18
IFT43-208ENST00000554423 CREBZFQ9NS37 354 aa7.7□□□□□ -1.18
IFT43-208ENST00000554423 MMRN1Q13201 1228 aa7.66□□□□□ -1.18
IFT43-208ENST00000554423 STAG3Q9UJ98 1225 aa7.65□□□□□ -1.18
IFT43-208ENST00000554423 MS4A3Q96HJ5 214 aa7.64□□□□□ -1.19
IFT43-208ENST00000554423 FKBP8Q14318 412 aa7.63□□□□□ -1.19
IFT43-208ENST00000554423 NPM1P06748 294 aaKnown RBP eCLIP7.61□□□□□ -1.19
IFT43-208ENST00000554423 SPNS2Q8IVW8 549 aa7.61□□□□□ -1.19
IFT43-208ENST00000554423 ATN1P54259 1190 aaPredicted RBP7.58□□□□□ -1.2
IFT43-208ENST00000554423 ST18O60284 1047 aa7.54□□□□□ -1.2
IFT43-208ENST00000554423 PROM2Q8N271 834 aa7.54□□□□□ -1.2
IFT43-208ENST00000554423 SEC24BO95487 1268 aa7.53□□□□□ -1.2
IFT43-208ENST00000554423 POTEFA5A3E0 1075 aa7.52□□□□□ -1.21
IFT43-208ENST00000554423 FBXO3Q9UK99 471 aa7.52□□□□□ -1.21
IFT43-208ENST00000554423 PLEKHG5O94827 1062 aa7.49□□□□□ -1.21
IFT43-208ENST00000554423 SLAIN1Q8ND83 568 aa7.49□□□□□ -1.21
IFT43-208ENST00000554423 BMP2KQ9NSY1 1161 aaPredicted RBP7.47□□□□□ -1.21
IFT43-208ENST00000554423 TSPYL2Q9H2G4 693 aaPredicted RBP7.45□□□□□ -1.22
IFT43-208ENST00000554423 COLQQ9Y215 455 aaPredicted RBP7.45□□□□□ -1.22
IFT43-208ENST00000554423 MNX1P50219 401 aaPredicted RBP7.43□□□□□ -1.22
IFT43-208ENST00000554423 TMEM121BQ9BXQ6 578 aaPredicted RBP7.42□□□□□ -1.22
IFT43-208ENST00000554423 MIER1Q8N108 512 aa7.41□□□□□ -1.22
IFT43-208ENST00000554423 TIE1P35590 1138 aa7.4□□□□□ -1.22
IFT43-208ENST00000554423 PLCD3Q8N3E9 789 aa7.39□□□□□ -1.23
IFT43-208ENST00000554423 KIF12Q96FN5 646 aa7.39□□□□□ -1.23
IFT43-208ENST00000554423 ZBTB47Q9UFB7 747 aaPredicted RBP7.39□□□□□ -1.23
IFT43-208ENST00000554423 TRPC6Q9Y210 931 aa7.39□□□□□ -1.23
IFT43-208ENST00000554423 MARVELD3Q96A59 401 aa7.38□□□□□ -1.23
IFT43-208ENST00000554423 CCDC61Q9Y6R9 512 aa7.38□□□□□ -1.23
IFT43-208ENST00000554423 TTLL13PA6NNM8 815 aa7.35□□□□□ -1.23
IFT43-208ENST00000554423 SNPHO15079 494 aa7.35□□□□□ -1.23
IFT43-208ENST00000554423 IER5LQ5T953 404 aa7.35□□□□□ -1.23
IFT43-208ENST00000554423 MAP3K13O43283 966 aa7.33□□□□□ -1.24
IFT43-208ENST00000554423 TRIM35Q9UPQ4 493 aa7.32□□□□□ -1.24
IFT43-208ENST00000554423 VASPP50552 380 aaPredicted RBP7.31□□□□□ -1.24
IFT43-208ENST00000554423 KLHL34Q8N239 644 aa7.29□□□□□ -1.24
IFT43-208ENST00000554423 PLCG2P16885 1265 aa7.28□□□□□ -1.24
IFT43-208ENST00000554423 EMP3P54852 163 aa7.28□□□□□ -1.24
IFT43-208ENST00000554423 KRTAP3-3Q9BYR6 98 aa7.25□□□□□ -1.25
IFT43-208ENST00000554423 KRTAP3-2Q9BYR7 98 aa7.25□□□□□ -1.25
IFT43-208ENST00000554423 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.23□□□□□ -1.25
IFT43-208ENST00000554423 HS3ST6Q96QI5 342 aa7.22□□□□□ -1.25
IFT43-208ENST00000554423 FAM205CA6NFA0 338 aa7.21□□□□□ -1.26
IFT43-208ENST00000554423 SPOCK2Q92563 424 aa7.18□□□□□ -1.26
IFT43-208ENST00000554423 RNF166Q96A37 237 aaPredicted RBP7.18□□□□□ -1.26
IFT43-208ENST00000554423 PCDHB13Q9Y5F0 798 aa7.18□□□□□ -1.26
IFT43-208ENST00000554423 POTEB3A0JP26 581 aa7.17□□□□□ -1.26
IFT43-208ENST00000554423 POTEBQ6S5H4 581 aa7.17□□□□□ -1.26
IFT43-208ENST00000554423 FAM212AQ96EL1 285 aa7.17□□□□□ -1.26
IFT43-208ENST00000554423 TMEM106CQ9BVX2 250 aa7.17□□□□□ -1.26
IFT43-208ENST00000554423 IFNLR1Q8IU57 520 aaPredicted RBP7.16□□□□□ -1.26
IFT43-208ENST00000554423 SGIP1Q9BQI5 828 aa7.16□□□□□ -1.26
IFT43-208ENST00000554423 IRX5P78411 483 aaPredicted RBP7.15□□□□□ -1.26
IFT43-208ENST00000554423 GSE1Q14687 1217 aa7.15□□□□□ -1.26
IFT43-208ENST00000554423 OCEL1Q9H607 264 aa7.15□□□□□ -1.26
IFT43-208ENST00000554423 DCAF8Q5TAQ9 597 aa7.14□□□□□ -1.27
IFT43-208ENST00000554423 RASEFQ8IZ41 740 aa7.14□□□□□ -1.27
IFT43-208ENST00000554423 NUBP1P53384 320 aa7.13□□□□□ -1.27
IFT43-208ENST00000554423 IFNL1Q8IU54 200 aa7.1□□□□□ -1.27
IFT43-208ENST00000554423 C3orf67Q6ZVT6 689 aa7.09□□□□□ -1.27
IFT43-208ENST00000554423 MYT1LQ9UL68 1186 aa7.08□□□□□ -1.28
IFT43-208ENST00000554423 CIZ1Q9ULV3 898 aaPredicted RBP7.08□□□□□ -1.28
IFT43-208ENST00000554423 TRIM41Q8WV44 630 aa7.07□□□□□ -1.28
IFT43-208ENST00000554423 CHRM1P11229 460 aaPredicted RBP7.02□□□□□ -1.29
IFT43-208ENST00000554423 ERBB3P21860 1342 aa7.01□□□□□ -1.29
IFT43-208ENST00000554423 PYGBP11216 843 aa6.99□□□□□ -1.29
IFT43-208ENST00000554423 L3MBTL3Q96JM7 780 aaPredicted RBP6.99□□□□□ -1.29
IFT43-208ENST00000554423 ZNF467Q7Z7K2 595 aaPredicted RBP6.98□□□□□ -1.29
IFT43-208ENST00000554423 TAOK2Q9UL54 1235 aa6.98□□□□□ -1.29
IFT43-208ENST00000554423 ZNF710Q8N1W2 664 aa6.97□□□□□ -1.29
IFT43-208ENST00000554423 PTGER2P43116 358 aa6.94□□□□□ -1.3
IFT43-208ENST00000554423 ECM2O94769 699 aaPredicted RBP6.93□□□□□ -1.3
IFT43-208ENST00000554423 HOXB1P14653 301 aaPredicted RBP6.93□□□□□ -1.3
IFT43-208ENST00000554423 GOLGA2Q08379 1002 aa6.93□□□□□ -1.3
IFT43-208ENST00000554423 PDCD7Q8N8D1 485 aaKnown RBP6.93□□□□□ -1.3
IFT43-208ENST00000554423 VARS2Q5ST30 1063 aaKnown RBP6.92□□□□□ -1.3
IFT43-208ENST00000554423 PLA2G2EQ9NZK7 142 aa6.91□□□□□ -1.3
IFT43-208ENST00000554423 MKRN3Q13064 507 aaKnown RBP6.9□□□□□ -1.3
IFT43-208ENST00000554423 PDAP1Q13442 181 aaKnown RBP6.9□□□□□ -1.3
IFT43-208ENST00000554423 RIOK3O14730 519 aaKnown RBP6.89□□□□□ -1.31
IFT43-208ENST00000554423 HOXB3P14651 431 aaPredicted RBP6.89□□□□□ -1.31
IFT43-208ENST00000554423 PCDHB8Q9UN66 801 aa6.89□□□□□ -1.31
IFT43-208ENST00000554423 DOK7Q18PE1 504 aa6.88□□□□□ -1.31
IFT43-208ENST00000554423 PSEN1P49768 467 aa6.87□□□□□ -1.31
IFT43-208ENST00000554423 AMER1Q5JTC6 1135 aaPredicted RBP6.87□□□□□ -1.31
IFT43-208ENST00000554423 G3V3G9 751 aa6.86□□□□□ -1.31
IFT43-208ENST00000554423 RIMBP2O15034 1052 aa6.86□□□□□ -1.31
IFT43-208ENST00000554423 VGFO15240 615 aaPredicted RBP6.86□□□□□ -1.31
IFT43-208ENST00000554423 PKD2Q13563 968 aa6.86□□□□□ -1.31
IFT43-208ENST00000554423 ANKRD13DQ6ZTN6 518 aa6.86□□□□□ -1.31
IFT43-208ENST00000554423 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.86□□□□□ -1.31
IFT43-208ENST00000554423 ZNF687Q8N1G0 1237 aa6.85□□□□□ -1.31
IFT43-208ENST00000554423 RGL2O15211 777 aa6.78□□□□□ -1.32
IFT43-208ENST00000554423 HCSTQ9UBK5 93 aa6.78□□□□□ -1.32
IFT43-208ENST00000554423 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms