RNA–Protein interactions for RNA: ENST00000554233.1

IFT43-207, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 635 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-207ENST00000554233 POTEIP0CG38 1075 aa10.33□□□□□ -0.76
IFT43-207ENST00000554233 DCBLD2Q96PD2 775 aa10.33□□□□□ -0.76
IFT43-207ENST00000554233 CCDC61Q9Y6R9 512 aa10.33□□□□□ -0.76
IFT43-207ENST00000554233 NUBP1P53384 320 aa10.31□□□□□ -0.76
IFT43-207ENST00000554233 KLHL34Q8N239 644 aa10.29□□□□□ -0.76
IFT43-207ENST00000554233 MS4A3Q96HJ5 214 aa10.29□□□□□ -0.76
IFT43-207ENST00000554233 CCDC180Q9P1Z9 1646 aa10.26□□□□□ -0.77
IFT43-207ENST00000554233 FAM212AQ96EL1 285 aa10.25□□□□□ -0.77
IFT43-207ENST00000554233 KIF12Q96FN5 646 aa10.25□□□□□ -0.77
IFT43-207ENST00000554233 MAP3K13O43283 966 aa10.23□□□□□ -0.77
IFT43-207ENST00000554233 DCAF8Q5TAQ9 597 aa10.22□□□□□ -0.77
IFT43-207ENST00000554233 IFNLR1Q8IU57 520 aaPredicted RBP10.19□□□□□ -0.78
IFT43-207ENST00000554233 LHX8Q68G74 356 aa10.16□□□□□ -0.78
IFT43-207ENST00000554233 TRPC6Q9Y210 931 aa10.16□□□□□ -0.78
IFT43-207ENST00000554233 PCDHB13Q9Y5F0 798 aa10.16□□□□□ -0.78
IFT43-207ENST00000554233 PELP1Q8IZL8 1130 aaKnown RBP10.15□□□□□ -0.78
IFT43-207ENST00000554233 PYGBP11216 843 aa10.14□□□□□ -0.79
IFT43-207ENST00000554233 ATMINO43313 823 aaPredicted RBP10.13□□□□□ -0.79
IFT43-207ENST00000554233 ASTLQ6HA08 431 aaPredicted RBP10.13□□□□□ -0.79
IFT43-207ENST00000554233 SPOCK2Q92563 424 aa10.11□□□□□ -0.79
IFT43-207ENST00000554233 ATN1P54259 1190 aaPredicted RBP10.1□□□□□ -0.79
IFT43-207ENST00000554233 GSE1Q14687 1217 aa10.1□□□□□ -0.79
IFT43-207ENST00000554233 IFNL1Q8IU54 200 aa10.1□□□□□ -0.79
IFT43-207ENST00000554233 SGIP1Q9BQI5 828 aa10.1□□□□□ -0.79
IFT43-207ENST00000554233 BMP2KQ9NSY1 1161 aaPredicted RBP10.1□□□□□ -0.79
IFT43-207ENST00000554233 TIE1P35590 1138 aa10.07□□□□□ -0.8
IFT43-207ENST00000554233 CIZ1Q9ULV3 898 aaPredicted RBP10.06□□□□□ -0.8
IFT43-207ENST00000554233 METRNQ9UJH8 293 aa10.05□□□□□ -0.8
IFT43-207ENST00000554233 TTLL13PA6NNM8 815 aa10.04□□□□□ -0.8
IFT43-207ENST00000554233 SLC39A7Q92504 469 aa10.04□□□□□ -0.8
IFT43-207ENST00000554233 PCDHB8Q9UN66 801 aa10.04□□□□□ -0.8
IFT43-207ENST00000554233 C7P10643 843 aa10.02□□□□□ -0.81
IFT43-207ENST00000554233 POTEB2H3BUK9 544 aa10.01□□□□□ -0.81
IFT43-207ENST00000554233 TMEM106CQ9BVX2 250 aa10□□□□□ -0.81
IFT43-207ENST00000554233 TRIM35Q9UPQ4 493 aa9.99□□□□□ -0.81
IFT43-207ENST00000554233 CHRM1P11229 460 aaPredicted RBP9.97□□□□□ -0.81
IFT43-207ENST00000554233 ZNF467Q7Z7K2 595 aaPredicted RBP9.95□□□□□ -0.82
IFT43-207ENST00000554233 POTEFA5A3E0 1075 aa9.94□□□□□ -0.82
IFT43-207ENST00000554233 SEC24BO95487 1268 aa9.92□□□□□ -0.82
IFT43-207ENST00000554233 OTUD5Q96G74 571 aa9.91□□□□□ -0.82
IFT43-207ENST00000554233 COLQQ9Y215 455 aaPredicted RBP9.91□□□□□ -0.82
IFT43-207ENST00000554233 POTEJP0CG39 1038 aa9.89□□□□□ -0.83
IFT43-207ENST00000554233 IER5LQ5T953 404 aa9.89□□□□□ -0.83
IFT43-207ENST00000554233 PSEN1P49768 467 aa9.88□□□□□ -0.83
IFT43-207ENST00000554233 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
IFT43-207ENST00000554233 PDAP1Q13442 181 aaKnown RBP9.85□□□□□ -0.83
IFT43-207ENST00000554233 ABCC9O60706 1549 aa9.83□□□□□ -0.84
IFT43-207ENST00000554233 PLCG2P16885 1265 aa9.83□□□□□ -0.84
IFT43-207ENST00000554233 GOLGA2Q08379 1002 aa9.83□□□□□ -0.84
IFT43-207ENST00000554233 IRX5P78411 483 aaPredicted RBP9.82□□□□□ -0.84
IFT43-207ENST00000554233 MAMSTRQ6ZN01 415 aa9.82□□□□□ -0.84
IFT43-207ENST00000554233 MKRN3Q13064 507 aaKnown RBP9.8□□□□□ -0.84
IFT43-207ENST00000554233 SCUBE2Q9NQ36 999 aa9.8□□□□□ -0.84
IFT43-207ENST00000554233 OCEL1Q9H607 264 aa9.78□□□□□ -0.84
IFT43-207ENST00000554233 CABP2Q9NPB3 220 aa9.78□□□□□ -0.84
IFT43-207ENST00000554233 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
IFT43-207ENST00000554233 RIOK3O14730 519 aaKnown RBP9.76□□□□□ -0.85
IFT43-207ENST00000554233 ECM2O94769 699 aaPredicted RBP9.73□□□□□ -0.85
IFT43-207ENST00000554233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.73□□□□□ -0.85
IFT43-207ENST00000554233 PDCD7Q8N8D1 485 aaKnown RBP9.72□□□□□ -0.85
IFT43-207ENST00000554233 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.7□□□□□ -0.86
IFT43-207ENST00000554233 PKD2Q13563 968 aa9.7□□□□□ -0.86
IFT43-207ENST00000554233 ZFP91Q96JP5 570 aaPredicted RBP9.7□□□□□ -0.86
IFT43-207ENST00000554233 VGFO15240 615 aaPredicted RBP9.69□□□□□ -0.86
IFT43-207ENST00000554233 EFCAB3Q8N7B9 438 aa9.68□□□□□ -0.86
IFT43-207ENST00000554233 SLAIN1Q8ND83 568 aa9.67□□□□□ -0.86
IFT43-207ENST00000554233 DPY19L2Q6NUT2 758 aa9.66□□□□□ -0.86
IFT43-207ENST00000554233 RGL2O15211 777 aa9.64□□□□□ -0.87
IFT43-207ENST00000554233 L3MBTL3Q96JM7 780 aaPredicted RBP9.64□□□□□ -0.87
IFT43-207ENST00000554233 ILDR1Q86SU0 546 aaPredicted RBP9.63□□□□□ -0.87
IFT43-207ENST00000554233 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.63□□□□□ -0.87
IFT43-207ENST00000554233 FAM163AQ96GL9 167 aaPredicted RBP9.62□□□□□ -0.87
IFT43-207ENST00000554233 TAOK2Q9UL54 1235 aa9.62□□□□□ -0.87
IFT43-207ENST00000554233 C3orf67Q6ZVT6 689 aa9.61□□□□□ -0.87
IFT43-207ENST00000554233 BCL11BQ9C0K0 894 aaPredicted RBP9.61□□□□□ -0.87
IFT43-207ENST00000554233 STK24Q9Y6E0 443 aa9.6□□□□□ -0.87
IFT43-207ENST00000554233 MYO15BQ96JP2 1530 aa9.6□□□□□ -0.87
IFT43-207ENST00000554233 NACADO15069 1562 aa9.58□□□□□ -0.88
IFT43-207ENST00000554233 G3V3G9 751 aa9.58□□□□□ -0.88
IFT43-207ENST00000554233 STK25O00506 426 aa9.58□□□□□ -0.88
IFT43-207ENST00000554233 RB1CC1Q8TDY2 1594 aa9.58□□□□□ -0.88
IFT43-207ENST00000554233 SOX12O15370 315 aa9.57□□□□□ -0.88
IFT43-207ENST00000554233 PHF8Q9UPP1 1060 aa9.57□□□□□ -0.88
IFT43-207ENST00000554233 BOLA1Q9Y3E2 137 aa9.57□□□□□ -0.88
IFT43-207ENST00000554233 LCE2DQ5TA82 110 aaPredicted RBP9.56□□□□□ -0.88
IFT43-207ENST00000554233 POTEMA6NI47 508 aa9.55□□□□□ -0.88
IFT43-207ENST00000554233 POTEGQ6S5H5 508 aa9.54□□□□□ -0.88
IFT43-207ENST00000554233 MS4A4AQ96JQ5 239 aa9.53□□□□□ -0.88
IFT43-207ENST00000554233 DCAF1Q9Y4B6 1507 aa9.52□□□□□ -0.88
IFT43-207ENST00000554233 NLRP6P59044 892 aa9.5□□□□□ -0.89
IFT43-207ENST00000554233 ZCCHC6Q5VYS8 1495 aaKnown RBP9.5□□□□□ -0.89
IFT43-207ENST00000554233 UNC13AQ9UPW8 1703 aa9.49□□□□□ -0.89
IFT43-207ENST00000554233 ST18O60284 1047 aa9.48□□□□□ -0.89
IFT43-207ENST00000554233 MICALL2Q8IY33 904 aa9.48□□□□□ -0.89
IFT43-207ENST00000554233 TMEM121BQ9BXQ6 578 aaPredicted RBP9.48□□□□□ -0.89
IFT43-207ENST00000554233 MFRPQ9BY79 579 aa9.48□□□□□ -0.89
IFT43-207ENST00000554233 SNPHO15079 494 aa9.47□□□□□ -0.89
IFT43-207ENST00000554233 FBXO22Q8NEZ5 403 aa9.47□□□□□ -0.89
IFT43-207ENST00000554233 CHGAP10645 457 aaKnown RBP9.41□□□□□ -0.9
IFT43-207ENST00000554233 HS6ST3Q8IZP7 471 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms