RNA–Protein interactions for RNA: ENST00000553615.5

FCF1-203, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-203ENST00000553615 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
FCF1-203ENST00000553615 CD44P16070 742 aaKnown RBP11.9□□□□□ -0.5
FCF1-203ENST00000553615 SP7Q8TDD2 431 aaPredicted RBP11.89□□□□□ -0.51
FCF1-203ENST00000553615 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
FCF1-203ENST00000553615 C19orf67A6NJJ6 358 aa11.87□□□□□ -0.51
FCF1-203ENST00000553615 HAX1O00165 279 aa11.87□□□□□ -0.51
FCF1-203ENST00000553615 PKD2Q13563 968 aa11.87□□□□□ -0.51
FCF1-203ENST00000553615 ECM2O94769 699 aaPredicted RBP11.84□□□□□ -0.51
FCF1-203ENST00000553615 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
FCF1-203ENST00000553615 CCDC61Q9Y6R9 512 aa11.8□□□□□ -0.52
FCF1-203ENST00000553615 PYGBP11216 843 aa11.77□□□□□ -0.53
FCF1-203ENST00000553615 CHRM1P11229 460 aaPredicted RBP11.77□□□□□ -0.53
FCF1-203ENST00000553615 ZNF579Q8NAF0 562 aaKnown RBP11.74□□□□□ -0.53
FCF1-203ENST00000553615 EVX2Q03828 476 aa11.7□□□□□ -0.54
FCF1-203ENST00000553615 PHF12Q96QT6 1004 aa11.7□□□□□ -0.54
FCF1-203ENST00000553615 KIF12Q96FN5 646 aa11.69□□□□□ -0.54
FCF1-203ENST00000553615 RGL2O15211 777 aa11.68□□□□□ -0.54
FCF1-203ENST00000553615 DCAF8L2P0C7V8 631 aa11.67□□□□□ -0.54
FCF1-203ENST00000553615 HRCP23327 699 aa11.67□□□□□ -0.54
FCF1-203ENST00000553615 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
FCF1-203ENST00000553615 PCDHB13Q9Y5F0 798 aa11.67□□□□□ -0.54
FCF1-203ENST00000553615 RIOK3O14730 519 aaKnown RBP11.65□□□□□ -0.54
FCF1-203ENST00000553615 MAP3K13O43283 966 aa11.65□□□□□ -0.54
FCF1-203ENST00000553615 CLCN6P51797 869 aa11.65□□□□□ -0.54
FCF1-203ENST00000553615 ZNF467Q7Z7K2 595 aaPredicted RBP11.65□□□□□ -0.54
FCF1-203ENST00000553615 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
FCF1-203ENST00000553615 RNF25Q96BH1 459 aaPredicted RBP11.64□□□□□ -0.55
FCF1-203ENST00000553615 PCDHB8Q9UN66 801 aa11.6□□□□□ -0.55
FCF1-203ENST00000553615 IFNL1Q8IU54 200 aa11.59□□□□□ -0.55
FCF1-203ENST00000553615 VGFO15240 615 aaPredicted RBP11.58□□□□□ -0.56
FCF1-203ENST00000553615 MS4A3Q96HJ5 214 aa11.57□□□□□ -0.56
FCF1-203ENST00000553615 PDAP1Q13442 181 aaKnown RBP11.54□□□□□ -0.56
FCF1-203ENST00000553615 GALR2O43603 387 aaPredicted RBP11.52□□□□□ -0.57
FCF1-203ENST00000553615 GABBR2O75899 941 aa11.52□□□□□ -0.57
FCF1-203ENST00000553615 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.5□□□□□ -0.57
FCF1-203ENST00000553615 CHGAP10645 457 aaKnown RBP11.5□□□□□ -0.57
FCF1-203ENST00000553615 PSEN1P49768 467 aa11.5□□□□□ -0.57
FCF1-203ENST00000553615 ZFP91Q96JP5 570 aaPredicted RBP11.5□□□□□ -0.57
FCF1-203ENST00000553615 STK25O00506 426 aa11.48□□□□□ -0.57
FCF1-203ENST00000553615 HS6ST3Q8IZP7 471 aa11.46□□□□□ -0.57
FCF1-203ENST00000553615 TIE1P35590 1138 aa11.45□□□□□ -0.58
FCF1-203ENST00000553615 TRPC6Q9Y210 931 aa11.45□□□□□ -0.58
FCF1-203ENST00000553615 TMEM106CQ9BVX2 250 aa11.44□□□□□ -0.58
FCF1-203ENST00000553615 BCL11BQ9C0K0 894 aaPredicted RBP11.44□□□□□ -0.58
FCF1-203ENST00000553615 STK24Q9Y6E0 443 aa11.44□□□□□ -0.58
FCF1-203ENST00000553615 DCBLD2Q96PD2 775 aa11.4□□□□□ -0.58
FCF1-203ENST00000553615 TTLL13PA6NNM8 815 aa11.39□□□□□ -0.59
FCF1-203ENST00000553615 BMP2KQ9NSY1 1161 aaPredicted RBP11.39□□□□□ -0.59
FCF1-203ENST00000553615 GOLGA2Q08379 1002 aa11.38□□□□□ -0.59
FCF1-203ENST00000553615 BBXQ8WY36 941 aaPredicted RBP11.38□□□□□ -0.59
FCF1-203ENST00000553615 CABP2Q9NPB3 220 aa11.36□□□□□ -0.59
FCF1-203ENST00000553615 ASTLQ6HA08 431 aaPredicted RBP11.35□□□□□ -0.59
FCF1-203ENST00000553615 ATMINO43313 823 aaPredicted RBP11.34□□□□□ -0.59
FCF1-203ENST00000553615 DNAJC5Q9H3Z4 198 aa11.34□□□□□ -0.59
FCF1-203ENST00000553615 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.34□□□□□ -0.59
FCF1-203ENST00000553615 TRIM35Q9UPQ4 493 aa11.33□□□□□ -0.6
FCF1-203ENST00000553615 NISCHQ9Y2I1 1504 aa11.33□□□□□ -0.6
FCF1-203ENST00000553615 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
FCF1-203ENST00000553615 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
FCF1-203ENST00000553615 EFCAB3Q8N7B9 438 aa11.3□□□□□ -0.6
FCF1-203ENST00000553615 SOX12O15370 315 aa11.27□□□□□ -0.61
FCF1-203ENST00000553615 NKX1-1Q15270 411 aaPredicted RBP11.26□□□□□ -0.61
FCF1-203ENST00000553615 RYDENQ9NUL5 291 aaKnown RBP11.26□□□□□ -0.61
FCF1-203ENST00000553615 POTEIP0CG38 1075 aa11.24□□□□□ -0.61
FCF1-203ENST00000553615 IER5LQ5T953 404 aa11.23□□□□□ -0.61
FCF1-203ENST00000553615 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
FCF1-203ENST00000553615 NLRP6P59044 892 aa11.22□□□□□ -0.61
FCF1-203ENST00000553615 PAXIP1Q6ZW49 1069 aaPredicted RBP11.21□□□□□ -0.61
FCF1-203ENST00000553615 ERICH6Q7L0X2 663 aa11.21□□□□□ -0.61
FCF1-203ENST00000553615 SLC39A7Q92504 469 aa11.21□□□□□ -0.61
FCF1-203ENST00000553615 MFRPQ9BY79 579 aa11.21□□□□□ -0.61
FCF1-203ENST00000553615 CFAP44Q96MT7 982 aa11.2□□□□□ -0.62
FCF1-203ENST00000553615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.2□□□□□ -0.62
FCF1-203ENST00000553615 PHF8Q9UPP1 1060 aa11.2□□□□□ -0.62
FCF1-203ENST00000553615 C7P10643 843 aa11.19□□□□□ -0.62
FCF1-203ENST00000553615 PLCB2Q00722 1185 aa11.18□□□□□ -0.62
FCF1-203ENST00000553615 GTPBP6O43824 516 aaPredicted RBP11.17□□□□□ -0.62
FCF1-203ENST00000553615 SEC24BO95487 1268 aa11.17□□□□□ -0.62
FCF1-203ENST00000553615 LHX8Q68G74 356 aa11.17□□□□□ -0.62
FCF1-203ENST00000553615 OCEL1Q9H607 264 aa11.16□□□□□ -0.62
FCF1-203ENST00000553615 PLCG2P16885 1265 aa11.15□□□□□ -0.62
FCF1-203ENST00000553615 IRX5P78411 483 aaPredicted RBP11.15□□□□□ -0.62
FCF1-203ENST00000553615 FBXO22Q8NEZ5 403 aa11.15□□□□□ -0.62
FCF1-203ENST00000553615 METRNQ9UJH8 293 aa11.15□□□□□ -0.62
FCF1-203ENST00000553615 ILDR1Q86SU0 546 aaPredicted RBP11.13□□□□□ -0.63
FCF1-203ENST00000553615 MS4A4AQ96JQ5 239 aa11.1□□□□□ -0.63
FCF1-203ENST00000553615 PDCD7Q8N8D1 485 aaKnown RBP11.09□□□□□ -0.63
FCF1-203ENST00000553615 COLQQ9Y215 455 aaPredicted RBP11.09□□□□□ -0.63
FCF1-203ENST00000553615 CCDC180Q9P1Z9 1646 aa11.06□□□□□ -0.64
FCF1-203ENST00000553615 POTEFA5A3E0 1075 aa11.04□□□□□ -0.64
FCF1-203ENST00000553615 G3V3G9 751 aa11.04□□□□□ -0.64
FCF1-203ENST00000553615 PPP1R37O75864 691 aa11.04□□□□□ -0.64
FCF1-203ENST00000553615 PRKCSHP14314 528 aaPredicted RBP11.04□□□□□ -0.64
FCF1-203ENST00000553615 DPY19L2Q6NUT2 758 aa11.04□□□□□ -0.64
FCF1-203ENST00000553615 L3MBTL3Q96JM7 780 aaPredicted RBP11.04□□□□□ -0.64
FCF1-203ENST00000553615 HAP1P54257 671 aaPredicted RBP11.03□□□□□ -0.64
FCF1-203ENST00000553615 ZEB1P37275 1124 aaPredicted RBP11.02□□□□□ -0.65
FCF1-203ENST00000553615 CENPBP07199 599 aaPredicted RBP11.01□□□□□ -0.65
FCF1-203ENST00000553615 BOLA1Q9Y3E2 137 aa11□□□□□ -0.65
FCF1-203ENST00000553615 BCL11AQ9H165 835 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms