RNA–Protein interactions for RNA: ENST00000553496.1

LINC01146-201, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 3

Gene LINC01146, Length 425 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-201ENST00000553496 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
LINC01146-201ENST00000553496 GALR2O43603 387 aaPredicted RBP15.49■□□□□ 0.07
LINC01146-201ENST00000553496 PAK3O75914 559 aaPredicted RBP15.49■□□□□ 0.07
LINC01146-201ENST00000553496 PHF12Q96QT6 1004 aa15.49■□□□□ 0.07
LINC01146-201ENST00000553496 LHX8Q68G74 356 aa15.47■□□□□ 0.07
LINC01146-201ENST00000553496 DCBLD2Q96PD2 775 aa15.44■□□□□ 0.06
LINC01146-201ENST00000553496 FKBP8Q14318 412 aa15.4■□□□□ 0.06
LINC01146-201ENST00000553496 MIER1Q8N108 512 aa15.37■□□□□ 0.05
LINC01146-201ENST00000553496 TSPYL2Q9H2G4 693 aaPredicted RBP15.32■□□□□ 0.04
LINC01146-201ENST00000553496 CCDC61Q9Y6R9 512 aa15.31■□□□□ 0.04
LINC01146-201ENST00000553496 MS4A3Q96HJ5 214 aa15.29■□□□□ 0.04
LINC01146-201ENST00000553496 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
LINC01146-201ENST00000553496 EIF4G1Q04637 1599 aaKnown RBP15.25■□□□□ 0.03
LINC01146-201ENST00000553496 RASEFQ8IZ41 740 aa15.25■□□□□ 0.03
LINC01146-201ENST00000553496 PLCD3Q8N3E9 789 aa15.23■□□□□ 0.03
LINC01146-201ENST00000553496 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
LINC01146-201ENST00000553496 KIF12Q96FN5 646 aa15.2■□□□□ 0.02
LINC01146-201ENST00000553496 ASTLQ6HA08 431 aaPredicted RBP15.17■□□□□ 0.02
LINC01146-201ENST00000553496 CC2D2AQ9P2K1 1620 aa15.15■□□□□ 0.02
LINC01146-201ENST00000553496 ATMINO43313 823 aaPredicted RBP15.15■□□□□ 0.02
LINC01146-201ENST00000553496 NUBP1P53384 320 aa15.14■□□□□ 0.01
LINC01146-201ENST00000553496 POTEB2H3BUK9 544 aa15.13■□□□□ 0.01
LINC01146-201ENST00000553496 CECR2Q9BXF3 1484 aa15.11■□□□□ 0.01
LINC01146-201ENST00000553496 MAP3K13O43283 966 aa15.1■□□□□ 0.01
LINC01146-201ENST00000553496 ZBTB47Q9UFB7 747 aaPredicted RBP15.1■□□□□ 0.01
LINC01146-201ENST00000553496 TRPC6Q9Y210 931 aa15.08■□□□□ 0
LINC01146-201ENST00000553496 ATN1P54259 1190 aaPredicted RBP15.04■□□□□ -0
LINC01146-201ENST00000553496 OTUD5Q96G74 571 aa15.03■□□□□ -0
LINC01146-201ENST00000553496 BMP2KQ9NSY1 1161 aaPredicted RBP15.02■□□□□ -0
LINC01146-201ENST00000553496 METRNQ9UJH8 293 aa15.02■□□□□ -0
LINC01146-201ENST00000553496 FBXO3Q9UK99 471 aa15.02■□□□□ -0
LINC01146-201ENST00000553496 SLC39A7Q92504 469 aa15.01□□□□□ -0.01
LINC01146-201ENST00000553496 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
LINC01146-201ENST00000553496 C7P10643 843 aa15□□□□□ -0.01
LINC01146-201ENST00000553496 BAZ1AQ9NRL2 1556 aaPredicted RBP14.99□□□□□ -0.01
LINC01146-201ENST00000553496 TIE1P35590 1138 aa14.97□□□□□ -0.01
LINC01146-201ENST00000553496 FAM212AQ96EL1 285 aa14.95□□□□□ -0.02
LINC01146-201ENST00000553496 SGIP1Q9BQI5 828 aa14.95□□□□□ -0.02
LINC01146-201ENST00000553496 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
LINC01146-201ENST00000553496 POTEJP0CG39 1038 aa14.94□□□□□ -0.02
LINC01146-201ENST00000553496 ATAD2BQ9ULI0 1458 aa14.94□□□□□ -0.02
LINC01146-201ENST00000553496 SMARCA2P51531 1590 aa14.94□□□□□ -0.02
LINC01146-201ENST00000553496 PCDHB13Q9Y5F0 798 aa14.92□□□□□ -0.02
LINC01146-201ENST00000553496 PEG3Q9GZU2 1588 aa14.92□□□□□ -0.02
LINC01146-201ENST00000553496 POTEFA5A3E0 1075 aa14.9□□□□□ -0.02
LINC01146-201ENST00000553496 TTLL13PA6NNM8 815 aa14.9□□□□□ -0.02
LINC01146-201ENST00000553496 VASPP50552 380 aaPredicted RBP14.89□□□□□ -0.03
LINC01146-201ENST00000553496 HMGXB3Q12766 1538 aa14.88□□□□□ -0.03
LINC01146-201ENST00000553496 IFNL1Q8IU54 200 aa14.88□□□□□ -0.03
LINC01146-201ENST00000553496 MROH2BQ7Z745 1585 aa14.84□□□□□ -0.03
LINC01146-201ENST00000553496 DCAF8Q5TAQ9 597 aa14.83□□□□□ -0.04
LINC01146-201ENST00000553496 TRIM35Q9UPQ4 493 aa14.79□□□□□ -0.04
LINC01146-201ENST00000553496 BAZ1BQ9UIG0 1483 aaKnown RBP14.78□□□□□ -0.04
LINC01146-201ENST00000553496 PYGBP11216 843 aa14.78□□□□□ -0.04
LINC01146-201ENST00000553496 COLQQ9Y215 455 aaPredicted RBP14.78□□□□□ -0.04
LINC01146-201ENST00000553496 KLHL34Q8N239 644 aa14.76□□□□□ -0.05
LINC01146-201ENST00000553496 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
LINC01146-201ENST00000553496 IER5LQ5T953 404 aa14.73□□□□□ -0.05
LINC01146-201ENST00000553496 MAMSTRQ6ZN01 415 aa14.73□□□□□ -0.05
LINC01146-201ENST00000553496 TMEM106CQ9BVX2 250 aa14.73□□□□□ -0.05
LINC01146-201ENST00000553496 SEC24BO95487 1268 aa14.68□□□□□ -0.06
LINC01146-201ENST00000553496 PCDHB8Q9UN66 801 aa14.68□□□□□ -0.06
LINC01146-201ENST00000553496 GSE1Q14687 1217 aa14.67□□□□□ -0.06
LINC01146-201ENST00000553496 IFNLR1Q8IU57 520 aaPredicted RBP14.67□□□□□ -0.06
LINC01146-201ENST00000553496 SCUBE2Q9NQ36 999 aa14.66□□□□□ -0.06
LINC01146-201ENST00000553496 CHRM1P11229 460 aaPredicted RBP14.6□□□□□ -0.07
LINC01146-201ENST00000553496 IRX5P78411 483 aaPredicted RBP14.6□□□□□ -0.07
LINC01146-201ENST00000553496 WIZO95785 1651 aa14.59□□□□□ -0.07
LINC01146-201ENST00000553496 SPOCK2Q92563 424 aa14.57□□□□□ -0.08
LINC01146-201ENST00000553496 LCE2DQ5TA82 110 aaPredicted RBP14.56□□□□□ -0.08
LINC01146-201ENST00000553496 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
LINC01146-201ENST00000553496 ZNF467Q7Z7K2 595 aaPredicted RBP14.55□□□□□ -0.08
LINC01146-201ENST00000553496 POTEMA6NI47 508 aa14.54□□□□□ -0.08
LINC01146-201ENST00000553496 CADPSQ9ULU8 1353 aa14.54□□□□□ -0.08
LINC01146-201ENST00000553496 LAMC3Q9Y6N6 1575 aa14.53□□□□□ -0.08
LINC01146-201ENST00000553496 PLCG2P16885 1265 aa14.53□□□□□ -0.08
LINC01146-201ENST00000553496 POTEGQ6S5H5 508 aa14.51□□□□□ -0.09
LINC01146-201ENST00000553496 OCEL1Q9H607 264 aa14.49□□□□□ -0.09
LINC01146-201ENST00000553496 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
LINC01146-201ENST00000553496 NESP48681 1621 aa14.47□□□□□ -0.09
LINC01146-201ENST00000553496 ERCC6Q03468 1493 aa14.46□□□□□ -0.09
LINC01146-201ENST00000553496 FAM163AQ96GL9 167 aaPredicted RBP14.46□□□□□ -0.09
LINC01146-201ENST00000553496 CFTRP13569 1480 aa14.45□□□□□ -0.1
LINC01146-201ENST00000553496 CIZ1Q9ULV3 898 aaPredicted RBP14.45□□□□□ -0.1
LINC01146-201ENST00000553496 PSEN1P49768 467 aa14.44□□□□□ -0.1
LINC01146-201ENST00000553496 CUX2O14529 1486 aa14.43□□□□□ -0.1
LINC01146-201ENST00000553496 PDCD7Q8N8D1 485 aaKnown RBP14.4□□□□□ -0.1
LINC01146-201ENST00000553496 SLAIN1Q8ND83 568 aa14.39□□□□□ -0.11
LINC01146-201ENST00000553496 CCDC88BA6NC98 1476 aa14.38□□□□□ -0.11
LINC01146-201ENST00000553496 PDAP1Q13442 181 aaKnown RBP14.38□□□□□ -0.11
LINC01146-201ENST00000553496 MKRN3Q13064 507 aaKnown RBP14.35□□□□□ -0.11
LINC01146-201ENST00000553496 PLSCR2Q9NRY7 297 aa14.35□□□□□ -0.11
LINC01146-201ENST00000553496 GOLGA2Q08379 1002 aa14.33□□□□□ -0.12
LINC01146-201ENST00000553496 ILDR1Q86SU0 546 aaPredicted RBP14.32□□□□□ -0.12
LINC01146-201ENST00000553496 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
LINC01146-201ENST00000553496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.29□□□□□ -0.122e-12■■■■■ 47.2
LINC01146-201ENST00000553496 MRC2Q9UBG0 1479 aa14.29□□□□□ -0.12
LINC01146-201ENST00000553496 CEP164Q9UPV0 1460 aa14.29□□□□□ -0.12
LINC01146-201ENST00000553496 THOC2Q8NI27 1593 aaKnown RBP14.28□□□□□ -0.12
LINC01146-201ENST00000553496 PCDH10Q9P2E7 1040 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms