RNA–Protein interactions for RNA: ENST00000552681.1

GNPTAB-210, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best)

Gene GNPTAB, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-210ENST00000552681 ARID3CA6NKF2 412 aa13.16□□□□□ -0.3
GNPTAB-210ENST00000552681 KCTD17Q8N5Z5 321 aa13.14□□□□□ -0.31
GNPTAB-210ENST00000552681 RAD21O60216 631 aa13.13□□□□□ -0.31
GNPTAB-210ENST00000552681 NEUROD2Q15784 382 aa13.12□□□□□ -0.31
GNPTAB-210ENST00000552681 MTMR7Q9Y216 660 aa13.06□□□□□ -0.32
GNPTAB-210ENST00000552681 RGS22Q8NE09 1264 aa13.06□□□□□ -0.32
GNPTAB-210ENST00000552681 RBM25P49756 843 aaKnown RBP13.04□□□□□ -0.32
GNPTAB-210ENST00000552681 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
GNPTAB-210ENST00000552681 FOXD4L5Q5VV16 416 aaPredicted RBP13.03□□□□□ -0.32
GNPTAB-210ENST00000552681 FOXD4L4Q8WXT5 416 aaPredicted RBP13.03□□□□□ -0.32
GNPTAB-210ENST00000552681 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.32
GNPTAB-210ENST00000552681 NEFLP07196 543 aa13.02□□□□□ -0.32
GNPTAB-210ENST00000552681 RGL2O15211 777 aa13□□□□□ -0.33
GNPTAB-210ENST00000552681 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.99□□□□□ -0.33
GNPTAB-210ENST00000552681 MSH5O43196 834 aa12.99□□□□□ -0.33
GNPTAB-210ENST00000552681 APBB1O00213 710 aa12.98□□□□□ -0.33
GNPTAB-210ENST00000552681 BCL11BQ9C0K0 894 aaPredicted RBP12.98□□□□□ -0.33
GNPTAB-210ENST00000552681 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
GNPTAB-210ENST00000552681 LMOD2Q6P5Q4 547 aa12.93□□□□□ -0.34
GNPTAB-210ENST00000552681 CCDC180Q9P1Z9 1646 aa12.91□□□□□ -0.34
GNPTAB-210ENST00000552681 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.35
GNPTAB-210ENST00000552681 USP35Q9P2H5 1018 aa12.9□□□□□ -0.35
GNPTAB-210ENST00000552681 CHGAP10645 457 aaKnown RBP12.89□□□□□ -0.35
GNPTAB-210ENST00000552681 ABCC9O60706 1549 aa12.88□□□□□ -0.35
GNPTAB-210ENST00000552681 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
GNPTAB-210ENST00000552681 AEBP1Q8IUX7 1158 aa12.86□□□□□ -0.35
GNPTAB-210ENST00000552681 IRX6P78412 446 aaPredicted RBP12.86□□□□□ -0.35
GNPTAB-210ENST00000552681 DNAJC5BQ9UF47 199 aa12.85□□□□□ -0.35
GNPTAB-210ENST00000552681 FAM177A1Q8N128 213 aaPredicted RBP12.84□□□□□ -0.35
GNPTAB-210ENST00000552681 PKNOX2Q96KN3 472 aa12.82□□□□□ -0.36
GNPTAB-210ENST00000552681 SLC24A3Q9HC58 644 aa12.82□□□□□ -0.36
GNPTAB-210ENST00000552681 BCCIPQ9P287 314 aaKnown RBP eCLIP12.82□□□□□ -0.36
GNPTAB-210ENST00000552681 BRPF3Q9ULD4 1205 aa12.81□□□□□ -0.36
GNPTAB-210ENST00000552681 POTEDQ86YR6 584 aa12.79□□□□□ -0.36
GNPTAB-210ENST00000552681 CWC22Q9HCG8 908 aaKnown RBP12.79□□□□□ -0.36
GNPTAB-210ENST00000552681 MFAP1P55081 439 aaKnown RBP12.79□□□□□ -0.36
GNPTAB-210ENST00000552681 RNF216Q9NWF9 866 aaPredicted RBP12.79□□□□□ -0.36
GNPTAB-210ENST00000552681 TMCO4Q5TGY1 634 aa12.78□□□□□ -0.36
GNPTAB-210ENST00000552681 CCDC82Q8N4S0 544 aa12.78□□□□□ -0.36
GNPTAB-210ENST00000552681 ZFP91Q96JP5 570 aaPredicted RBP12.78□□□□□ -0.36
GNPTAB-210ENST00000552681 ZNF592Q92610 1267 aa12.76□□□□□ -0.37
GNPTAB-210ENST00000552681 FGD1P98174 961 aa12.74□□□□□ -0.37
GNPTAB-210ENST00000552681 CCDC136Q96JN2 1154 aa12.72□□□□□ -0.37
GNPTAB-210ENST00000552681 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
GNPTAB-210ENST00000552681 PPM1GO15355 546 aaPredicted RBP12.71□□□□□ -0.38
GNPTAB-210ENST00000552681 E9PSI1 815 aa12.69□□□□□ -0.38
GNPTAB-210ENST00000552681 CERS3Q8IU89 383 aa12.69□□□□□ -0.38
GNPTAB-210ENST00000552681 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.69□□□□□ -0.38
GNPTAB-210ENST00000552681 GZF1Q9H116 711 aaPredicted RBP12.69□□□□□ -0.38
GNPTAB-210ENST00000552681 ZC3H15Q8WU90 426 aaKnown RBP12.68□□□□□ -0.38
GNPTAB-210ENST00000552681 TMED8Q6PL24 325 aaPredicted RBP12.67□□□□□ -0.38
GNPTAB-210ENST00000552681 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
GNPTAB-210ENST00000552681 MKRN3Q13064 507 aaKnown RBP12.67□□□□□ -0.38
GNPTAB-210ENST00000552681 TICAM2Q86XR7 235 aa12.66□□□□□ -0.38
GNPTAB-210ENST00000552681 A0A0U1RQG5 324 aaPredicted RBP12.64□□□□□ -0.39
GNPTAB-210ENST00000552681 TRAIPQ9BWF2 469 aa12.64□□□□□ -0.39
GNPTAB-210ENST00000552681 RSPH4AQ5TD94 716 aa12.64□□□□□ -0.39
GNPTAB-210ENST00000552681 IL27Q8NEV9 243 aa12.63□□□□□ -0.39
GNPTAB-210ENST00000552681 PSMD1Q99460 953 aa12.62□□□□□ -0.39
GNPTAB-210ENST00000552681 GPBP1L1Q9HC44 474 aaPredicted RBP12.61□□□□□ -0.39
GNPTAB-210ENST00000552681 ARID4BQ4LE39 1312 aaPredicted RBP12.6□□□□□ -0.39
GNPTAB-210ENST00000552681 SPDYE4A6NLX3 237 aa12.59□□□□□ -0.39
GNPTAB-210ENST00000552681 CLSTN1O94985 981 aa12.55□□□□□ -0.4
GNPTAB-210ENST00000552681 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
GNPTAB-210ENST00000552681 PROM2Q8N271 834 aa12.55□□□□□ -0.4
GNPTAB-210ENST00000552681 ZNF526Q8TF50 670 aaPredicted RBP12.55□□□□□ -0.4
GNPTAB-210ENST00000552681 SPOCK2Q92563 424 aa12.54□□□□□ -0.4
GNPTAB-210ENST00000552681 NKX1-1Q15270 411 aaPredicted RBP12.52□□□□□ -0.41
GNPTAB-210ENST00000552681 WDR70Q9NW82 654 aa12.51□□□□□ -0.41
GNPTAB-210ENST00000552681 ZNF316A6NFI3 1004 aaPredicted RBP12.5□□□□□ -0.41
GNPTAB-210ENST00000552681 KCNV2Q8TDN2 545 aa12.5□□□□□ -0.41
GNPTAB-210ENST00000552681 ZNF326Q5BKZ1 582 aaKnown RBP12.49□□□□□ -0.41
GNPTAB-210ENST00000552681 PRDM16Q9HAZ2 1276 aa12.49□□□□□ -0.41
GNPTAB-210ENST00000552681 CC2D2BQ6DHV5 1058 aa12.48□□□□□ -0.41
GNPTAB-210ENST00000552681 KDM4AO75164 1064 aa12.47□□□□□ -0.41
GNPTAB-210ENST00000552681 ZEB1P37275 1124 aaPredicted RBP12.47□□□□□ -0.41
GNPTAB-210ENST00000552681 DMRT2Q9Y5R5 561 aa12.46□□□□□ -0.41
GNPTAB-210ENST00000552681 IRF5Q13568 498 aa12.45□□□□□ -0.42
GNPTAB-210ENST00000552681 P3H3Q8IVL6 736 aa12.45□□□□□ -0.42
GNPTAB-210ENST00000552681 FBXW7Q969H0 707 aa12.45□□□□□ -0.42
GNPTAB-210ENST00000552681 GTPBP6O43824 516 aaPredicted RBP12.44□□□□□ -0.42
GNPTAB-210ENST00000552681 CCDC27Q2M243 656 aa12.44□□□□□ -0.42
GNPTAB-210ENST00000552681 CCDC125Q86Z20 511 aa12.44□□□□□ -0.42
GNPTAB-210ENST00000552681 HS6ST3Q8IZP7 471 aa12.44□□□□□ -0.42
GNPTAB-210ENST00000552681 CLUAP1Q96AJ1 413 aa12.44□□□□□ -0.42
GNPTAB-210ENST00000552681 RETREG2Q8NC44 543 aa12.43□□□□□ -0.42
GNPTAB-210ENST00000552681 NAP1L5Q96NT1 182 aaPredicted RBP12.42□□□□□ -0.42
GNPTAB-210ENST00000552681 PRDM10Q9NQV6 1147 aa12.36□□□□□ -0.43
GNPTAB-210ENST00000552681 TRAK2O60296 914 aa12.36□□□□□ -0.43
GNPTAB-210ENST00000552681 RB1CC1Q8TDY2 1594 aa12.34□□□□□ -0.43
GNPTAB-210ENST00000552681 SMARCA5O60264 1052 aaPredicted RBP12.32□□□□□ -0.44
GNPTAB-210ENST00000552681 TRIM41Q8WV44 630 aa12.32□□□□□ -0.44
GNPTAB-210ENST00000552681 ZMYND10O75800 440 aa12.31□□□□□ -0.44
GNPTAB-210ENST00000552681 KDM4CQ9H3R0 1056 aa12.31□□□□□ -0.44
GNPTAB-210ENST00000552681 CADPSQ9ULU8 1353 aa12.31□□□□□ -0.44
GNPTAB-210ENST00000552681 BARGINQ6ZT62 677 aa12.3□□□□□ -0.44
GNPTAB-210ENST00000552681 ZNF777Q9ULD5 760 aaPredicted RBP12.28□□□□□ -0.44
GNPTAB-210ENST00000552681 TEX2Q8IWB9 1127 aa12.28□□□□□ -0.44
GNPTAB-210ENST00000552681 UNCXA6NJT0 531 aa12.26□□□□□ -0.45
GNPTAB-210ENST00000552681 NCLP19338 710 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms