RNA–Protein interactions for RNA: ENST00000552564.5

ITGA5-211, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 4,996 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-211ENST00000552564 NBR1Q14596 966 aa18.61■□□□□ 0.57
ITGA5-211ENST00000552564 MTUS2Q5JR59 1369 aa18.6■□□□□ 0.57
ITGA5-211ENST00000552564 KIF27Q86VH2 1401 aa18.59■□□□□ 0.57
ITGA5-211ENST00000552564 TSPY4P0CV99 314 aa18.58■□□□□ 0.56
ITGA5-211ENST00000552564 TSPY10P0CW01 314 aa18.58■□□□□ 0.56
ITGA5-211ENST00000552564 ARID3CA6NKF2 412 aa18.57■□□□□ 0.56
ITGA5-211ENST00000552564 PPM1GO15355 546 aaPredicted RBP18.56■□□□□ 0.56
ITGA5-211ENST00000552564 ESF1Q9H501 851 aaKnown RBP18.55■□□□□ 0.56
ITGA5-211ENST00000552564 MYH16Q9H6N6 1097 aa18.55■□□□□ 0.56
ITGA5-211ENST00000552564 GOLGA6L22H0YM25 854 aa18.52■□□□□ 0.56
ITGA5-211ENST00000552564 STAG3Q9UJ98 1225 aa18.5■□□□□ 0.55
ITGA5-211ENST00000552564 SMARCA2P51531 1590 aa18.49■□□□□ 0.55
ITGA5-211ENST00000552564 CHGAP10645 457 aaKnown RBP18.49■□□□□ 0.55
ITGA5-211ENST00000552564 TRIM44Q96DX7 344 aaPredicted RBP18.48■□□□□ 0.55
ITGA5-211ENST00000552564 SALL2Q9Y467 1007 aaPredicted RBP18.48■□□□□ 0.55
ITGA5-211ENST00000552564 CCDC88BA6NC98 1476 aa18.48■□□□□ 0.55
ITGA5-211ENST00000552564 TOP2AP11388 1531 aaKnown RBP18.46■□□□□ 0.55
ITGA5-211ENST00000552564 ERICH6BQ5W0A0 696 aa18.46■□□□□ 0.55
ITGA5-211ENST00000552564 CHIC2Q9UKJ5 165 aa18.46■□□□□ 0.55
ITGA5-211ENST00000552564 NCLP19338 710 aaKnown RBP18.46■□□□□ 0.55
ITGA5-211ENST00000552564 CDCA8Q53HL2 280 aa18.46■□□□□ 0.55
ITGA5-211ENST00000552564 NPM1P06748 294 aaKnown RBP eCLIP18.43■□□□□ 0.54
ITGA5-211ENST00000552564 PPP4R2Q9NY27 417 aa18.43■□□□□ 0.54
ITGA5-211ENST00000552564 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
ITGA5-211ENST00000552564 WIZO95785 1651 aa18.39■□□□□ 0.53
ITGA5-211ENST00000552564 TNNT2P45379 298 aaPredicted RBP18.38■□□□□ 0.53
ITGA5-211ENST00000552564 SOGA1O94964 1423 aa18.37■□□□□ 0.53
ITGA5-211ENST00000552564 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
ITGA5-211ENST00000552564 CFAP53Q96M91 514 aa18.36■□□□□ 0.53
ITGA5-211ENST00000552564 KDM2AQ9Y2K7 1162 aa18.35■□□□□ 0.53
ITGA5-211ENST00000552564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.53
ITGA5-211ENST00000552564 CHMP7Q8WUX9 453 aaPredicted RBP18.34■□□□□ 0.53
ITGA5-211ENST00000552564 CHMP4BQ9H444 224 aaKnown RBP18.33■□□□□ 0.53
ITGA5-211ENST00000552564 ABCC8Q09428 1581 aa18.33■□□□□ 0.52
ITGA5-211ENST00000552564 CASC1Q6TDU7 716 aa18.3■□□□□ 0.52
ITGA5-211ENST00000552564 MS4A1P11836 297 aa18.29■□□□□ 0.52
ITGA5-211ENST00000552564 ARXQ96QS3 562 aa18.29■□□□□ 0.52
ITGA5-211ENST00000552564 SUPT16HQ9Y5B9 1047 aaKnown RBP18.29■□□□□ 0.52
ITGA5-211ENST00000552564 NOP58Q9Y2X3 529 aaKnown RBP18.29■□□□□ 0.52
ITGA5-211ENST00000552564 SMARCA4P51532 1647 aa18.28■□□□□ 0.52
ITGA5-211ENST00000552564 FHAD1B1AJZ9 1412 aa18.28■□□□□ 0.52
ITGA5-211ENST00000552564 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
ITGA5-211ENST00000552564 CUX2O14529 1486 aa18.27■□□□□ 0.51
ITGA5-211ENST00000552564 KNSTRNQ9Y448 316 aa18.27■□□□□ 0.51
ITGA5-211ENST00000552564 RRP7BPQ9NSQ0 103 aa18.25■□□□□ 0.51
ITGA5-211ENST00000552564 CDK11BP21127 795 aaKnown RBP18.24■□□□□ 0.51
ITGA5-211ENST00000552564 VPS8Q8N3P4 1428 aa18.24■□□□□ 0.51
ITGA5-211ENST00000552564 CARMIL1Q5VZK9 1371 aa18.23■□□□□ 0.51
ITGA5-211ENST00000552564 HIRIP3Q9BW71 556 aaPredicted RBP18.23■□□□□ 0.51
ITGA5-211ENST00000552564 PLEKHD1A6NEE1 506 aa18.22■□□□□ 0.51
ITGA5-211ENST00000552564 PTMAP06454 111 aaKnown RBP18.22■□□□□ 0.51
ITGA5-211ENST00000552564 ZRSR1Q15695 479 aaKnown RBP18.19■□□□□ 0.5
ITGA5-211ENST00000552564 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
ITGA5-211ENST00000552564 CARD11Q9BXL7 1154 aa18.18■□□□□ 0.5
ITGA5-211ENST00000552564 CFAP44Q96MT7 982 aa18.18■□□□□ 0.5
ITGA5-211ENST00000552564 NUDCQ9Y266 331 aa18.17■□□□□ 0.5
ITGA5-211ENST00000552564 ATAD2BQ9ULI0 1458 aa18.16■□□□□ 0.5
ITGA5-211ENST00000552564 L1TD1Q5T7N2 865 aaKnown RBP18.16■□□□□ 0.5
ITGA5-211ENST00000552564 CCNB3Q8WWL7 1395 aa18.15■□□□□ 0.5
ITGA5-211ENST00000552564 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
ITGA5-211ENST00000552564 CFDP1Q9UEE9 299 aaPredicted RBP18.12■□□□□ 0.49
ITGA5-211ENST00000552564 DNTTIP2Q5QJE6 756 aaKnown RBP18.12■□□□□ 0.49
ITGA5-211ENST00000552564 MAPK8IP3Q9UPT6 1336 aa18.12■□□□□ 0.49
ITGA5-211ENST00000552564 ERCC6Q03468 1493 aa18.1■□□□□ 0.49
ITGA5-211ENST00000552564 NAP1L5Q96NT1 182 aaPredicted RBP18.09■□□□□ 0.49
ITGA5-211ENST00000552564 GOLGA6L6A8MZA4 724 aa18.09■□□□□ 0.49
ITGA5-211ENST00000552564 NRDCO43847 1150 aa18.09■□□□□ 0.49
ITGA5-211ENST00000552564 PTMSP20962 102 aa18.08■□□□□ 0.48
ITGA5-211ENST00000552564 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
ITGA5-211ENST00000552564 LAS1LQ9Y4W2 734 aaKnown RBP18.04■□□□□ 0.48
ITGA5-211ENST00000552564 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
ITGA5-211ENST00000552564 HSP90AB1P08238 724 aaKnown RBP18.04■□□□□ 0.48
ITGA5-211ENST00000552564 CADPSQ9ULU8 1353 aa18.03■□□□□ 0.48
ITGA5-211ENST00000552564 HAP1P54257 671 aaPredicted RBP18.03■□□□□ 0.48
ITGA5-211ENST00000552564 RGL3Q3MIN7 710 aa18.03■□□□□ 0.48
ITGA5-211ENST00000552564 HSCBQ8IWL3 235 aa18.02■□□□□ 0.48
ITGA5-211ENST00000552564 EIF4G1Q04637 1599 aaKnown RBP18.02■□□□□ 0.48
ITGA5-211ENST00000552564 RGS3P49796 1198 aa18.02■□□□□ 0.48
ITGA5-211ENST00000552564 TMF1P82094 1093 aa18.02■□□□□ 0.48
ITGA5-211ENST00000552564 ARID4BQ4LE39 1312 aaPredicted RBP18.01■□□□□ 0.47
ITGA5-211ENST00000552564 SETD5Q9C0A6 1442 aa18■□□□□ 0.47
ITGA5-211ENST00000552564 ARHGAP35Q9NRY4 1499 aa18■□□□□ 0.47
ITGA5-211ENST00000552564 RBM19Q9Y4C8 960 aaKnown RBP17.99■□□□□ 0.47
ITGA5-211ENST00000552564 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
ITGA5-211ENST00000552564 CHAF1AQ13111 956 aaPredicted RBP17.99■□□□□ 0.47
ITGA5-211ENST00000552564 B4GALNT3Q6L9W6 998 aa17.98■□□□□ 0.47
ITGA5-211ENST00000552564 FMN1Q68DA7 1419 aa17.98■□□□□ 0.47
ITGA5-211ENST00000552564 DEKP35659 375 aaKnown RBP17.97■□□□□ 0.47
ITGA5-211ENST00000552564 TCERG1O14776 1098 aaKnown RBP17.97■□□□□ 0.47
ITGA5-211ENST00000552564 RAPGEF2Q9Y4G8 1499 aa17.96■□□□□ 0.47
ITGA5-211ENST00000552564 MSNP26038 577 aaKnown RBP17.94■□□□□ 0.46
ITGA5-211ENST00000552564 FRAT1Q92837 279 aaPredicted RBP17.94■□□□□ 0.46
ITGA5-211ENST00000552564 MCCP23508 829 aa17.94■□□□□ 0.46
ITGA5-211ENST00000552564 RALBP1Q15311 655 aa17.9■□□□□ 0.46
ITGA5-211ENST00000552564 KTN1Q86UP2 1357 aaKnown RBP17.89■□□□□ 0.46
ITGA5-211ENST00000552564 KANK4Q5T7N3 995 aaPredicted RBP17.89■□□□□ 0.46
ITGA5-211ENST00000552564 KCNH8Q96L42 1107 aa17.89■□□□□ 0.46
ITGA5-211ENST00000552564 GBP4Q96PP9 640 aa17.89■□□□□ 0.45
ITGA5-211ENST00000552564 NEUROD2Q15784 382 aa17.89■□□□□ 0.45
ITGA5-211ENST00000552564 GOLGA6L4A6NEF3 574 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms