RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 FAM69CQ0P6D2 419 aa19.73■□□□□ 0.75
PFDN5-212ENST00000550880 KIF13AQ9H1H9 1805 aa19.69■□□□□ 0.74
PFDN5-212ENST00000550880 ABCC10Q5T3U5 1492 aa19.67■□□□□ 0.74
PFDN5-212ENST00000550880 MAPKBP1O60336 1514 aa19.62■□□□□ 0.73
PFDN5-212ENST00000550880 RUSC2Q8N2Y8 1516 aa19.62■□□□□ 0.73
PFDN5-212ENST00000550880 KIAA0586Q9BVV6 1533 aa19.57■□□□□ 0.72
PFDN5-212ENST00000550880 DIP2BQ9P265 1576 aa19.55■□□□□ 0.72
PFDN5-212ENST00000550880 ADCY10Q96PN6 1610 aa19.54■□□□□ 0.72
PFDN5-212ENST00000550880 IGF1RP08069 1367 aa19.53■□□□□ 0.72
PFDN5-212ENST00000550880 KIF27Q86VH2 1401 aa19.52■□□□□ 0.72
PFDN5-212ENST00000550880 KDM6BO15054 1643 aa19.51■□□□□ 0.71
PFDN5-212ENST00000550880 PTPRGP23470 1445 aa19.49■□□□□ 0.71
PFDN5-212ENST00000550880 CUL7Q14999 1698 aa19.47■□□□□ 0.71
PFDN5-212ENST00000550880 KDM4FA0A1W2PPD8 638 aa19.47■□□□□ 0.71
PFDN5-212ENST00000550880 TTBK1Q5TCY1 1321 aaPredicted RBP19.47■□□□□ 0.71
PFDN5-212ENST00000550880 CARMIL2Q6F5E8 1435 aa19.45■□□□□ 0.7
PFDN5-212ENST00000550880 TSPOAP1O95153 1857 aa19.43■□□□□ 0.7
PFDN5-212ENST00000550880 TNIKQ9UKE5 1360 aa19.42■□□□□ 0.7
PFDN5-212ENST00000550880 CARMIL1Q5VZK9 1371 aa19.41■□□□□ 0.7
PFDN5-212ENST00000550880 ABCC2Q92887 1545 aa19.38■□□□□ 0.69
PFDN5-212ENST00000550880 PLB1Q6P1J6 1458 aa19.37■□□□□ 0.69
PFDN5-212ENST00000550880 ASXL2Q76L83 1435 aa19.35■□□□□ 0.69
PFDN5-212ENST00000550880 UHRF1BP1LA0JNW5 1464 aa19.31■□□□□ 0.68
PFDN5-212ENST00000550880 UACAQ9BZF9 1416 aa19.31■□□□□ 0.68
PFDN5-212ENST00000550880 GLI2P10070 1586 aa19.31■□□□□ 0.68
PFDN5-212ENST00000550880 IQGAP2Q13576 1575 aa19.31■□□□□ 0.68
PFDN5-212ENST00000550880 TEX14Q8IWB6 1497 aa19.23■□□□□ 0.67
PFDN5-212ENST00000550880 ADGRL1O94910 1474 aa19.22■□□□□ 0.67
PFDN5-212ENST00000550880 ILDR1Q86SU0 546 aaPredicted RBP19.22■□□□□ 0.67
PFDN5-212ENST00000550880 EPRSP07814 1512 aaKnown RBP19.21■□□□□ 0.67
PFDN5-212ENST00000550880 DISP1Q96F81 1524 aa19.21■□□□□ 0.67
PFDN5-212ENST00000550880 PPRC1Q5VV67 1664 aaKnown RBP19.2■□□□□ 0.66
PFDN5-212ENST00000550880 KDM5BQ9UGL1 1544 aa19.2■□□□□ 0.66
PFDN5-212ENST00000550880 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
PFDN5-212ENST00000550880 UGGT2Q9NYU1 1516 aa19.17■□□□□ 0.66
PFDN5-212ENST00000550880 MAP3K4Q9Y6R4 1608 aa19.16■□□□□ 0.66
PFDN5-212ENST00000550880 COL17A1Q9UMD9 1497 aaPredicted RBP19.16■□□□□ 0.66
PFDN5-212ENST00000550880 ZCCHC11Q5TAX3 1644 aaKnown RBP19.13■□□□□ 0.65
PFDN5-212ENST00000550880 KIAA0556O60303 1618 aa19.11■□□□□ 0.65
PFDN5-212ENST00000550880 WDR7Q9Y4E6 1490 aa19.11■□□□□ 0.65
PFDN5-212ENST00000550880 FAM9AQ8IZU1 332 aaPredicted RBP19.09■□□□□ 0.65
PFDN5-212ENST00000550880 KCNH8Q96L42 1107 aa19.08■□□□□ 0.64
PFDN5-212ENST00000550880 CD109Q6YHK3 1445 aa19.07■□□□□ 0.64
PFDN5-212ENST00000550880 GOLGA3Q08378 1498 aa19.06■□□□□ 0.64
PFDN5-212ENST00000550880 HECW2Q9P2P5 1572 aa19.04■□□□□ 0.64
PFDN5-212ENST00000550880 MAGI3Q5TCQ9 1506 aa19.03■□□□□ 0.64
PFDN5-212ENST00000550880 CFAP43Q8NDM7 1665 aa18.98■□□□□ 0.63
PFDN5-212ENST00000550880 CTTNBP2Q8WZ74 1663 aa18.96■□□□□ 0.63
PFDN5-212ENST00000550880 ABCA8O94911 1581 aa18.96■□□□□ 0.63
PFDN5-212ENST00000550880 ARID3CA6NKF2 412 aa18.89■□□□□ 0.61
PFDN5-212ENST00000550880 PHLDB1Q86UU1 1377 aa18.89■□□□□ 0.61
PFDN5-212ENST00000550880 ARAP3Q8WWN8 1544 aa18.89■□□□□ 0.61
PFDN5-212ENST00000550880 PRXQ9BXM0 1461 aa18.87■□□□□ 0.61
PFDN5-212ENST00000550880 P3H3Q8IVL6 736 aa18.86■□□□□ 0.61
PFDN5-212ENST00000550880 KIF21BO75037 1637 aa18.85■□□□□ 0.61
PFDN5-212ENST00000550880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
PFDN5-212ENST00000550880 HNRNPUL2Q1KMD3 747 aaKnown RBP18.84■□□□□ 0.61
PFDN5-212ENST00000550880 ATP10BO94823 1461 aa18.84■□□□□ 0.61
PFDN5-212ENST00000550880 FBXO41Q8TF61 875 aa18.82■□□□□ 0.6
PFDN5-212ENST00000550880 RAPGEF3O95398 923 aa18.8■□□□□ 0.6
PFDN5-212ENST00000550880 ARID4BQ4LE39 1312 aaPredicted RBP18.79■□□□□ 0.6
PFDN5-212ENST00000550880 ABCA9Q8IUA7 1624 aa18.78■□□□□ 0.6
PFDN5-212ENST00000550880 PTPRMP28827 1452 aa18.77■□□□□ 0.6
PFDN5-212ENST00000550880 NEO1Q92859 1461 aa18.77■□□□□ 0.6
PFDN5-212ENST00000550880 CSRNP3Q8WYN3 585 aa18.73■□□□□ 0.59
PFDN5-212ENST00000550880 ADAMTSL3P82987 1691 aa18.72■□□□□ 0.59
PFDN5-212ENST00000550880 RAPGEF6Q8TEU7 1601 aa18.71■□□□□ 0.58
PFDN5-212ENST00000550880 PLEKHD1A6NEE1 506 aa18.7■□□□□ 0.58
PFDN5-212ENST00000550880 SAMD9Q5K651 1589 aa18.68■□□□□ 0.58
PFDN5-212ENST00000550880 RANGAP1P46060 587 aaPredicted RBP18.67■□□□□ 0.58
PFDN5-212ENST00000550880 BCORL1Q5H9F3 1711 aa18.66■□□□□ 0.58
PFDN5-212ENST00000550880 DENND4BO75064 1496 aaPredicted RBP18.65■□□□□ 0.58
PFDN5-212ENST00000550880 PCF11O94913 1555 aaKnown RBP18.64■□□□□ 0.58
PFDN5-212ENST00000550880 NUP153P49790 1475 aaKnown RBP18.64■□□□□ 0.57
PFDN5-212ENST00000550880 POGZQ7Z3K3 1410 aa18.63■□□□□ 0.57
PFDN5-212ENST00000550880 MADDQ8WXG6 1647 aa18.63■□□□□ 0.57
PFDN5-212ENST00000550880 AKNAQ7Z591 1439 aa18.62■□□□□ 0.57
PFDN5-212ENST00000550880 FRMPD1Q5SYB0 1578 aa18.62■□□□□ 0.57
PFDN5-212ENST00000550880 LMTK3Q96Q04 1460 aa18.61■□□□□ 0.57
PFDN5-212ENST00000550880 FANCAO15360 1455 aa18.6■□□□□ 0.57
PFDN5-212ENST00000550880 PLPPR3Q6T4P5 718 aa18.6■□□□□ 0.57
PFDN5-212ENST00000550880 ARHGEF40Q8TER5 1519 aa18.59■□□□□ 0.57
PFDN5-212ENST00000550880 FHOD3Q2V2M9 1422 aa18.59■□□□□ 0.57
PFDN5-212ENST00000550880 CFAP74Q9C0B2 1584 aa18.58■□□□□ 0.56
PFDN5-212ENST00000550880 EEA1Q15075 1411 aa18.57■□□□□ 0.56
PFDN5-212ENST00000550880 RIMS1Q86UR5 1692 aaKnown RBP18.56■□□□□ 0.56
PFDN5-212ENST00000550880 HSPA2P54652 639 aa18.55■□□□□ 0.56
PFDN5-212ENST00000550880 RICTORQ6R327 1708 aa18.54■□□□□ 0.56
PFDN5-212ENST00000550880 MAGI2Q86UL8 1455 aa18.53■□□□□ 0.56
PFDN5-212ENST00000550880 EFCAB5A4FU69 1503 aa18.53■□□□□ 0.56
PFDN5-212ENST00000550880 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.53■□□□□ 0.563e-9■□□□□ 10.9
PFDN5-212ENST00000550880 MLECQ14165 292 aa18.52■□□□□ 0.56
PFDN5-212ENST00000550880 ZFYVE16Q7Z3T8 1539 aa18.52■□□□□ 0.56
PFDN5-212ENST00000550880 ZMYM4Q5VZL5 1548 aa18.51■□□□□ 0.55
PFDN5-212ENST00000550880 YEATS2Q9ULM3 1422 aa18.49■□□□□ 0.55
PFDN5-212ENST00000550880 CERKQ8TCT0 537 aa18.48■□□□□ 0.55
PFDN5-212ENST00000550880 SCAPERQ9BY12 1400 aa18.48■□□□□ 0.55
PFDN5-212ENST00000550880 ATP1B4Q9UN42 357 aaPredicted RBP18.47■□□□□ 0.55
PFDN5-212ENST00000550880 PLCH2O75038 1416 aa18.47■□□□□ 0.55
PFDN5-212ENST00000550880 TTC37Q6PGP7 1564 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms