RNA–Protein interactions for RNA: ENST00000550705.1

CNOT2-226, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-226ENST00000550705 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
CNOT2-226ENST00000550705 SLC39A7Q92504 469 aa12.36□□□□□ -0.43
CNOT2-226ENST00000550705 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
CNOT2-226ENST00000550705 C7P10643 843 aa12.35□□□□□ -0.43
CNOT2-226ENST00000550705 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
CNOT2-226ENST00000550705 ASTLQ6HA08 431 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-226ENST00000550705 FAM163AQ96GL9 167 aaPredicted RBP12.29□□□□□ -0.44
CNOT2-226ENST00000550705 SCUBE2Q9NQ36 999 aa12.29□□□□□ -0.44
CNOT2-226ENST00000550705 ATMINO43313 823 aaPredicted RBP12.27□□□□□ -0.45
CNOT2-226ENST00000550705 POTEJP0CG39 1038 aa12.27□□□□□ -0.45
CNOT2-226ENST00000550705 MS4A3Q96HJ5 214 aa12.26□□□□□ -0.45
CNOT2-226ENST00000550705 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
CNOT2-226ENST00000550705 LCE2DQ5TA82 110 aaPredicted RBP12.23□□□□□ -0.45
CNOT2-226ENST00000550705 MNX1P50219 401 aaPredicted RBP12.18□□□□□ -0.46
CNOT2-226ENST00000550705 MIER1Q8N108 512 aa12.14□□□□□ -0.47
CNOT2-226ENST00000550705 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
CNOT2-226ENST00000550705 ATN1P54259 1190 aaPredicted RBP12.11□□□□□ -0.47
CNOT2-226ENST00000550705 ZBTB47Q9UFB7 747 aaPredicted RBP12.11□□□□□ -0.47
CNOT2-226ENST00000550705 CDAN1Q8IWY9 1227 aa12.06□□□□□ -0.48
CNOT2-226ENST00000550705 TSPYL2Q9H2G4 693 aaPredicted RBP12.06□□□□□ -0.48
CNOT2-226ENST00000550705 VASPP50552 380 aaPredicted RBP12.01□□□□□ -0.49
CNOT2-226ENST00000550705 POTEFA5A3E0 1075 aa12□□□□□ -0.49
CNOT2-226ENST00000550705 BMP2KQ9NSY1 1161 aaPredicted RBP12□□□□□ -0.49
CNOT2-226ENST00000550705 CCDC61Q9Y6R9 512 aa12□□□□□ -0.49
CNOT2-226ENST00000550705 KIF12Q96FN5 646 aa11.99□□□□□ -0.49
CNOT2-226ENST00000550705 SEC24BO95487 1268 aa11.98□□□□□ -0.49
CNOT2-226ENST00000550705 TIE1P35590 1138 aa11.96□□□□□ -0.49
CNOT2-226ENST00000550705 KLHL34Q8N239 644 aa11.92□□□□□ -0.5
CNOT2-226ENST00000550705 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
CNOT2-226ENST00000550705 COLQQ9Y215 455 aaPredicted RBP11.9□□□□□ -0.5
CNOT2-226ENST00000550705 MAP3K13O43283 966 aa11.87□□□□□ -0.51
CNOT2-226ENST00000550705 TTLL13PA6NNM8 815 aa11.85□□□□□ -0.51
CNOT2-226ENST00000550705 ST18O60284 1047 aa11.85□□□□□ -0.51
CNOT2-226ENST00000550705 SLAIN1Q8ND83 568 aa11.85□□□□□ -0.51
CNOT2-226ENST00000550705 IER5LQ5T953 404 aa11.84□□□□□ -0.51
CNOT2-226ENST00000550705 MMRN1Q13201 1228 aa11.81□□□□□ -0.52
CNOT2-226ENST00000550705 TRIM35Q9UPQ4 493 aa11.8□□□□□ -0.52
CNOT2-226ENST00000550705 RASEFQ8IZ41 740 aa11.79□□□□□ -0.52
CNOT2-226ENST00000550705 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
CNOT2-226ENST00000550705 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
CNOT2-226ENST00000550705 IFNLR1Q8IU57 520 aaPredicted RBP11.77□□□□□ -0.53
CNOT2-226ENST00000550705 SPNS2Q8IVW8 549 aa11.77□□□□□ -0.53
CNOT2-226ENST00000550705 NUBP1P53384 320 aa11.75□□□□□ -0.53
CNOT2-226ENST00000550705 GSE1Q14687 1217 aa11.73□□□□□ -0.53
CNOT2-226ENST00000550705 TMEM121BQ9BXQ6 578 aaPredicted RBP11.73□□□□□ -0.53
CNOT2-226ENST00000550705 SGIP1Q9BQI5 828 aa11.72□□□□□ -0.53
CNOT2-226ENST00000550705 PLCG2P16885 1265 aa11.71□□□□□ -0.53
CNOT2-226ENST00000550705 DCAF8Q5TAQ9 597 aa11.71□□□□□ -0.53
CNOT2-226ENST00000550705 PCDHB13Q9Y5F0 798 aa11.71□□□□□ -0.53
CNOT2-226ENST00000550705 SNPHO15079 494 aa11.67□□□□□ -0.54
CNOT2-226ENST00000550705 TMEM106CQ9BVX2 250 aa11.63□□□□□ -0.55
CNOT2-226ENST00000550705 TRIM41Q8WV44 630 aa11.62□□□□□ -0.55
CNOT2-226ENST00000550705 MARVELD3Q96A59 401 aa11.6□□□□□ -0.55
CNOT2-226ENST00000550705 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
CNOT2-226ENST00000550705 IFNL1Q8IU54 200 aa11.58□□□□□ -0.56
CNOT2-226ENST00000550705 IRX5P78411 483 aaPredicted RBP11.57□□□□□ -0.56
CNOT2-226ENST00000550705 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.57□□□□□ -0.56
CNOT2-226ENST00000550705 CHRM1P11229 460 aaPredicted RBP11.55□□□□□ -0.56
CNOT2-226ENST00000550705 OCEL1Q9H607 264 aa11.54□□□□□ -0.56
CNOT2-226ENST00000550705 EMP3P54852 163 aa11.5□□□□□ -0.57
CNOT2-226ENST00000550705 PYGBP11216 843 aa11.49□□□□□ -0.57
CNOT2-226ENST00000550705 ZNF467Q7Z7K2 595 aaPredicted RBP11.47□□□□□ -0.57
CNOT2-226ENST00000550705 C3orf67Q6ZVT6 689 aa11.42□□□□□ -0.58
CNOT2-226ENST00000550705 TAOK2Q9UL54 1235 aa11.42□□□□□ -0.58
CNOT2-226ENST00000550705 HS3ST6Q96QI5 342 aa11.4□□□□□ -0.58
CNOT2-226ENST00000550705 KRTAP3-3Q9BYR6 98 aa11.4□□□□□ -0.58
CNOT2-226ENST00000550705 KRTAP3-2Q9BYR7 98 aa11.4□□□□□ -0.58
CNOT2-226ENST00000550705 PCDHB8Q9UN66 801 aa11.39□□□□□ -0.59
CNOT2-226ENST00000550705 FAM205CA6NFA0 338 aa11.38□□□□□ -0.59
CNOT2-226ENST00000550705 ECM2O94769 699 aaPredicted RBP11.36□□□□□ -0.59
CNOT2-226ENST00000550705 L3MBTL3Q96JM7 780 aaPredicted RBP11.33□□□□□ -0.6
CNOT2-226ENST00000550705 POTEB3A0JP26 581 aa11.32□□□□□ -0.6
CNOT2-226ENST00000550705 PDAP1Q13442 181 aaKnown RBP11.32□□□□□ -0.6
CNOT2-226ENST00000550705 POTEBQ6S5H4 581 aa11.32□□□□□ -0.6
CNOT2-226ENST00000550705 RIOK3O14730 519 aaKnown RBP11.31□□□□□ -0.6
CNOT2-226ENST00000550705 PKD2Q13563 968 aa11.3□□□□□ -0.6
CNOT2-226ENST00000550705 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
CNOT2-226ENST00000550705 PDCD7Q8N8D1 485 aaKnown RBP11.29□□□□□ -0.6
CNOT2-226ENST00000550705 PSEN1P49768 467 aa11.28□□□□□ -0.6
CNOT2-226ENST00000550705 VGFO15240 615 aaPredicted RBP11.27□□□□□ -0.61
CNOT2-226ENST00000550705 MKRN3Q13064 507 aaKnown RBP11.26□□□□□ -0.61
CNOT2-226ENST00000550705 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
CNOT2-226ENST00000550705 RNF166Q96A37 237 aaPredicted RBP11.22□□□□□ -0.61
CNOT2-226ENST00000550705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.19□□□□□ -0.623e-6■□□□□ 10.5
CNOT2-226ENST00000550705 RNF25Q96BH1 459 aaPredicted RBP11.17□□□□□ -0.62
CNOT2-226ENST00000550705 RGL2O15211 777 aa11.15□□□□□ -0.62
CNOT2-226ENST00000550705 ZNF710Q8N1W2 664 aa11.15□□□□□ -0.62
CNOT2-226ENST00000550705 ERBB3P21860 1342 aa11.14□□□□□ -0.63
CNOT2-226ENST00000550705 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.13□□□□□ -0.63
CNOT2-226ENST00000550705 G3V3G9 751 aa11.13□□□□□ -0.63
CNOT2-226ENST00000550705 ZFP91Q96JP5 570 aaPredicted RBP11.13□□□□□ -0.63
CNOT2-226ENST00000550705 MYT1LQ9UL68 1186 aa11.12□□□□□ -0.63
CNOT2-226ENST00000550705 HOXB1P14653 301 aaPredicted RBP11.11□□□□□ -0.63
CNOT2-226ENST00000550705 CABP2Q9NPB3 220 aa11.11□□□□□ -0.63
CNOT2-226ENST00000550705 STK25O00506 426 aa11.1□□□□□ -0.63
CNOT2-226ENST00000550705 HOXB3P14651 431 aaPredicted RBP11.1□□□□□ -0.63
CNOT2-226ENST00000550705 DOK7Q18PE1 504 aa11.09□□□□□ -0.63
CNOT2-226ENST00000550705 SOX12O15370 315 aa11.07□□□□□ -0.64
CNOT2-226ENST00000550705 BCL11BQ9C0K0 894 aaPredicted RBP11.07□□□□□ -0.64
CNOT2-226ENST00000550705 STK24Q9Y6E0 443 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms