RNA–Protein interactions for RNA: ENST00000550590.5

PMEL-216, Transcript of premelanosome protein, humanhuman

TSL 2

Gene PMEL, Length 801 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-216ENST00000550590 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
PMEL-216ENST00000550590 MKRN4PQ13434 485 aaPredicted RBP9.36□□□□□ -0.91
PMEL-216ENST00000550590 PABPN1Q86U42 306 aaKnown RBP eCLIP9.36□□□□□ -0.91
PMEL-216ENST00000550590 ATXN8OSP0DMR3 200 aa9.34□□□□□ -0.91
PMEL-216ENST00000550590 LCE2DQ5TA82 110 aaPredicted RBP9.34□□□□□ -0.91
PMEL-216ENST00000550590 NEUROD1Q13562 356 aa9.33□□□□□ -0.92
PMEL-216ENST00000550590 MAMSTRQ6ZN01 415 aa9.33□□□□□ -0.92
PMEL-216ENST00000550590 FAM163AQ96GL9 167 aaPredicted RBP9.33□□□□□ -0.92
PMEL-216ENST00000550590 GTF3C3Q9Y5Q9 886 aa9.33□□□□□ -0.92
PMEL-216ENST00000550590 CLSPNQ9HAW4 1339 aa9.29□□□□□ -0.92
PMEL-216ENST00000550590 ANP32EQ9BTT0 268 aa9.27□□□□□ -0.93
PMEL-216ENST00000550590 FAM9AQ8IZU1 332 aaPredicted RBP9.26□□□□□ -0.93
PMEL-216ENST00000550590 POTEJP0CG39 1038 aa9.25□□□□□ -0.93
PMEL-216ENST00000550590 METRNQ9UJH8 293 aa9.25□□□□□ -0.93
PMEL-216ENST00000550590 C7P10643 843 aa9.23□□□□□ -0.93
PMEL-216ENST00000550590 CDAN1Q8IWY9 1227 aa9.22□□□□□ -0.93
PMEL-216ENST00000550590 SLC39A7Q92504 469 aa9.21□□□□□ -0.94
PMEL-216ENST00000550590 SCUBE2Q9NQ36 999 aa9.21□□□□□ -0.94
PMEL-216ENST00000550590 SLC4A1APQ9BWU0 796 aaKnown RBP9.2□□□□□ -0.94
PMEL-216ENST00000550590 PAK3O75914 559 aaPredicted RBP9.19□□□□□ -0.94
PMEL-216ENST00000550590 ASTLQ6HA08 431 aaPredicted RBP9.17□□□□□ -0.94
PMEL-216ENST00000550590 PHF12Q96QT6 1004 aa9.17□□□□□ -0.94
PMEL-216ENST00000550590 ATMINO43313 823 aaPredicted RBP9.12□□□□□ -0.95
PMEL-216ENST00000550590 CREBZFQ9NS37 354 aa9.11□□□□□ -0.95
PMEL-216ENST00000550590 MMRN1Q13201 1228 aa9.08□□□□□ -0.96
PMEL-216ENST00000550590 DIEXFQ68CQ4 756 aaKnown RBP9.08□□□□□ -0.96
PMEL-216ENST00000550590 SUPT5HO00267 1087 aaKnown RBP9.05□□□□□ -0.96
PMEL-216ENST00000550590 ZBTB22O15209 634 aa9.05□□□□□ -0.96
PMEL-216ENST00000550590 MYT1LQ9UL68 1186 aa9.05□□□□□ -0.96
PMEL-216ENST00000550590 MS4A3Q96HJ5 214 aa9.03□□□□□ -0.96
PMEL-216ENST00000550590 SPNS2Q8IVW8 549 aa9.01□□□□□ -0.97
PMEL-216ENST00000550590 TRIM41Q8WV44 630 aa9□□□□□ -0.97
PMEL-216ENST00000550590 CSRNP3Q8WYN3 585 aa9□□□□□ -0.97
PMEL-216ENST00000550590 NPM1P06748 294 aaKnown RBP eCLIP8.98□□□□□ -0.97
PMEL-216ENST00000550590 STAG3Q9UJ98 1225 aa8.98□□□□□ -0.97
PMEL-216ENST00000550590 ATN1P54259 1190 aaPredicted RBP8.96□□□□□ -0.98
PMEL-216ENST00000550590 POTEFA5A3E0 1075 aa8.94□□□□□ -0.98
PMEL-216ENST00000550590 TSHZ2Q9NRE2 1034 aa8.94□□□□□ -0.98
PMEL-216ENST00000550590 ST18O60284 1047 aa8.92□□□□□ -0.98
PMEL-216ENST00000550590 ERICH6BQ5W0A0 696 aa8.92□□□□□ -0.98
PMEL-216ENST00000550590 SLC24A1O60721 1099 aa8.91□□□□□ -0.98
PMEL-216ENST00000550590 ZNF316A6NFI3 1004 aaPredicted RBP8.89□□□□□ -0.99
PMEL-216ENST00000550590 LOC105371045A0A1W2PR82 267 aa8.87□□□□□ -0.99
PMEL-216ENST00000550590 SUPT16HQ9Y5B9 1047 aaKnown RBP8.87□□□□□ -0.99
PMEL-216ENST00000550590 SHROOM4Q9ULL8 1493 aa8.86□□□□□ -0.99
PMEL-216ENST00000550590 MNX1P50219 401 aaPredicted RBP8.85□□□□□ -0.99
PMEL-216ENST00000550590 UBE2Q2Q8WVN8 375 aa8.85□□□□□ -0.99
PMEL-216ENST00000550590 SEC24BO95487 1268 aa8.84□□□□□ -0.99
PMEL-216ENST00000550590 BMP2KQ9NSY1 1161 aaPredicted RBP8.84□□□□□ -0.99
PMEL-216ENST00000550590 CCER1Q8TC90 406 aaPredicted RBP8.83□□□□□ -1
PMEL-216ENST00000550590 SLAIN1Q8ND83 568 aa8.82□□□□□ -1
PMEL-216ENST00000550590 TMEM121BQ9BXQ6 578 aaPredicted RBP8.82□□□□□ -1
PMEL-216ENST00000550590 COLQQ9Y215 455 aaPredicted RBP8.81□□□□□ -1
PMEL-216ENST00000550590 DAXXQ9UER7 740 aaPredicted RBP8.8□□□□□ -1
PMEL-216ENST00000550590 ZCCHC6Q5VYS8 1495 aaKnown RBP8.77□□□□□ -1
PMEL-216ENST00000550590 TIE1P35590 1138 aa8.77□□□□□ -1.01
PMEL-216ENST00000550590 KIF12Q96FN5 646 aa8.75□□□□□ -1.01
PMEL-216ENST00000550590 CCDC61Q9Y6R9 512 aa8.75□□□□□ -1.01
PMEL-216ENST00000550590 FANCIQ9NVI1 1328 aa8.75□□□□□ -1.01
PMEL-216ENST00000550590 TSPYL2Q9H2G4 693 aaPredicted RBP8.74□□□□□ -1.01
PMEL-216ENST00000550590 IER5LQ5T953 404 aa8.73□□□□□ -1.01
PMEL-216ENST00000550590 MIER1Q8N108 512 aa8.73□□□□□ -1.01
PMEL-216ENST00000550590 TRPC6Q9Y210 931 aa8.73□□□□□ -1.01
PMEL-216ENST00000550590 EIF5BO60841 1220 aaKnown RBP8.72□□□□□ -1.01
PMEL-216ENST00000550590 YTHDC1Q96MU7 727 aaKnown RBP8.72□□□□□ -1.01
PMEL-216ENST00000550590 TTLL13PA6NNM8 815 aa8.69□□□□□ -1.02
PMEL-216ENST00000550590 SNPHO15079 494 aa8.69□□□□□ -1.02
PMEL-216ENST00000550590 MARVELD3Q96A59 401 aa8.69□□□□□ -1.02
PMEL-216ENST00000550590 RBM19Q9Y4C8 960 aaKnown RBP8.69□□□□□ -1.02
PMEL-216ENST00000550590 ANO8Q9HCE9 1232 aaPredicted RBP8.67□□□□□ -1.02
PMEL-216ENST00000550590 MAP3K13O43283 966 aa8.65□□□□□ -1.02
PMEL-216ENST00000550590 WRNQ14191 1432 aaPredicted RBP eCLIP8.64□□□□□ -1.03
PMEL-216ENST00000550590 TRIM35Q9UPQ4 493 aa8.64□□□□□ -1.03
PMEL-216ENST00000550590 DEKP35659 375 aaKnown RBP8.63□□□□□ -1.03
PMEL-216ENST00000550590 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
PMEL-216ENST00000550590 KRTAP3-2Q9BYR7 98 aa8.61□□□□□ -1.03
PMEL-216ENST00000550590 PLCG2P16885 1265 aa8.58□□□□□ -1.04
PMEL-216ENST00000550590 EMP3P54852 163 aa8.58□□□□□ -1.04
PMEL-216ENST00000550590 NEFLP07196 543 aa8.55□□□□□ -1.04
PMEL-216ENST00000550590 PKNOX2Q96KN3 472 aa8.55□□□□□ -1.04
PMEL-216ENST00000550590 SALL2Q9Y467 1007 aaPredicted RBP8.55□□□□□ -1.04
PMEL-216ENST00000550590 SPDYE4A6NLX3 237 aa8.54□□□□□ -1.04
PMEL-216ENST00000550590 HS3ST6Q96QI5 342 aa8.53□□□□□ -1.04
PMEL-216ENST00000550590 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.53□□□□□ -1.04
PMEL-216ENST00000550590 SGIP1Q9BQI5 828 aa8.51□□□□□ -1.05
PMEL-216ENST00000550590 POTEB3A0JP26 581 aa8.49□□□□□ -1.05
PMEL-216ENST00000550590 FAM205CA6NFA0 338 aa8.49□□□□□ -1.05
PMEL-216ENST00000550590 C11orf95C9JLR9 678 aaPredicted RBP8.49□□□□□ -1.05
PMEL-216ENST00000550590 GLIPR1L2Q4G1C9 344 aa8.49□□□□□ -1.05
PMEL-216ENST00000550590 POTEBQ6S5H4 581 aa8.49□□□□□ -1.05
PMEL-216ENST00000550590 IRX5P78411 483 aaPredicted RBP8.48□□□□□ -1.05
PMEL-216ENST00000550590 CDK11AQ9UQ88 783 aaPredicted RBP8.48□□□□□ -1.05
PMEL-216ENST00000550590 FKBP8Q14318 412 aa8.47□□□□□ -1.05
PMEL-216ENST00000550590 RNF166Q96A37 237 aaPredicted RBP8.47□□□□□ -1.05
PMEL-216ENST00000550590 PCDHB13Q9Y5F0 798 aa8.46□□□□□ -1.06
PMEL-216ENST00000550590 OCEL1Q9H607 264 aa8.45□□□□□ -1.06
PMEL-216ENST00000550590 TMEM106CQ9BVX2 250 aa8.44□□□□□ -1.06
PMEL-216ENST00000550590 RASEFQ8IZ41 740 aa8.43□□□□□ -1.06
PMEL-216ENST00000550590 RTL5Q5HYW3 569 aaPredicted RBP8.42□□□□□ -1.06
PMEL-216ENST00000550590 RSPH6AQ9H0K4 717 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms