RNA–Protein interactions for RNA: ENST00000550023.5

KRR1-203, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-203ENST00000550023 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.41
KRR1-203ENST00000550023 ASTLQ6HA08 431 aaPredicted RBP12.46□□□□□ -0.41
KRR1-203ENST00000550023 LCE2DQ5TA82 110 aaPredicted RBP12.43□□□□□ -0.42
KRR1-203ENST00000550023 ATMINO43313 823 aaPredicted RBP12.41□□□□□ -0.42
KRR1-203ENST00000550023 POTEJP0CG39 1038 aa12.41□□□□□ -0.42
KRR1-203ENST00000550023 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
KRR1-203ENST00000550023 CDAN1Q8IWY9 1227 aa12.32□□□□□ -0.44
KRR1-203ENST00000550023 ATN1P54259 1190 aaPredicted RBP12.23□□□□□ -0.45
KRR1-203ENST00000550023 MNX1P50219 401 aaPredicted RBP12.19□□□□□ -0.46
KRR1-203ENST00000550023 SEC24BO95487 1268 aa12.14□□□□□ -0.47
KRR1-203ENST00000550023 TSPYL2Q9H2G4 693 aaPredicted RBP12.14□□□□□ -0.47
KRR1-203ENST00000550023 POTEFA5A3E0 1075 aa12.11□□□□□ -0.47
KRR1-203ENST00000550023 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
KRR1-203ENST00000550023 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
KRR1-203ENST00000550023 MMRN1Q13201 1228 aa12.07□□□□□ -0.48
KRR1-203ENST00000550023 TIE1P35590 1138 aa12.06□□□□□ -0.48
KRR1-203ENST00000550023 KIF12Q96FN5 646 aa12.05□□□□□ -0.48
KRR1-203ENST00000550023 CCDC61Q9Y6R9 512 aa12.05□□□□□ -0.48
KRR1-203ENST00000550023 ST18O60284 1047 aa12.03□□□□□ -0.48
KRR1-203ENST00000550023 SLAIN1Q8ND83 568 aa12.02□□□□□ -0.49
KRR1-203ENST00000550023 SPNS2Q8IVW8 549 aa12.01□□□□□ -0.49
KRR1-203ENST00000550023 COLQQ9Y215 455 aaPredicted RBP12□□□□□ -0.49
KRR1-203ENST00000550023 TRPC6Q9Y210 931 aa11.97□□□□□ -0.49
KRR1-203ENST00000550023 IER5LQ5T953 404 aa11.96□□□□□ -0.49
KRR1-203ENST00000550023 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
KRR1-203ENST00000550023 MAP3K13O43283 966 aa11.94□□□□□ -0.5
KRR1-203ENST00000550023 TMEM121BQ9BXQ6 578 aaPredicted RBP11.93□□□□□ -0.5
KRR1-203ENST00000550023 TRIM35Q9UPQ4 493 aa11.89□□□□□ -0.51
KRR1-203ENST00000550023 SNPHO15079 494 aa11.86□□□□□ -0.51
KRR1-203ENST00000550023 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
KRR1-203ENST00000550023 PLCG2P16885 1265 aa11.83□□□□□ -0.52
KRR1-203ENST00000550023 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
KRR1-203ENST00000550023 MARVELD3Q96A59 401 aa11.76□□□□□ -0.53
KRR1-203ENST00000550023 PCDHB13Q9Y5F0 798 aa11.76□□□□□ -0.53
KRR1-203ENST00000550023 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
KRR1-203ENST00000550023 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.71□□□□□ -0.53
KRR1-203ENST00000550023 TMEM106CQ9BVX2 250 aa11.69□□□□□ -0.54
KRR1-203ENST00000550023 MIER1Q8N108 512 aa11.68□□□□□ -0.54
KRR1-203ENST00000550023 EMP3P54852 163 aa11.67□□□□□ -0.54
KRR1-203ENST00000550023 IRX5P78411 483 aaPredicted RBP11.65□□□□□ -0.54
KRR1-203ENST00000550023 OCEL1Q9H607 264 aa11.64□□□□□ -0.55
KRR1-203ENST00000550023 IFNL1Q8IU54 200 aa11.62□□□□□ -0.55
KRR1-203ENST00000550023 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
KRR1-203ENST00000550023 PROM2Q8N271 834 aa11.57□□□□□ -0.56
KRR1-203ENST00000550023 HS3ST6Q96QI5 342 aa11.57□□□□□ -0.56
KRR1-203ENST00000550023 KRTAP3-3Q9BYR6 98 aa11.56□□□□□ -0.56
KRR1-203ENST00000550023 KRTAP3-2Q9BYR7 98 aa11.56□□□□□ -0.56
KRR1-203ENST00000550023 FAM205CA6NFA0 338 aa11.55□□□□□ -0.56
KRR1-203ENST00000550023 NISCHQ9Y2I1 1504 aa11.55□□□□□ -0.56
KRR1-203ENST00000550023 C3orf67Q6ZVT6 689 aa11.54□□□□□ -0.56
KRR1-203ENST00000550023 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
KRR1-203ENST00000550023 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
KRR1-203ENST00000550023 FAM212AQ96EL1 285 aa11.49□□□□□ -0.57
KRR1-203ENST00000550023 POTEB3A0JP26 581 aa11.45□□□□□ -0.58
KRR1-203ENST00000550023 POTEBQ6S5H4 581 aa11.45□□□□□ -0.58
KRR1-203ENST00000550023 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
KRR1-203ENST00000550023 NUBP1P53384 320 aa11.43□□□□□ -0.58
KRR1-203ENST00000550023 RNF166Q96A37 237 aaPredicted RBP11.43□□□□□ -0.58
KRR1-203ENST00000550023 GOLGA2Q08379 1002 aa11.36□□□□□ -0.59
KRR1-203ENST00000550023 MKRN3Q13064 507 aaKnown RBP11.33□□□□□ -0.6
KRR1-203ENST00000550023 PDCD7Q8N8D1 485 aaKnown RBP11.32□□□□□ -0.6
KRR1-203ENST00000550023 MYT1LQ9UL68 1186 aa11.31□□□□□ -0.6
KRR1-203ENST00000550023 ERBB3P21860 1342 aa11.29□□□□□ -0.6
KRR1-203ENST00000550023 PYGBP11216 843 aa11.28□□□□□ -0.6
KRR1-203ENST00000550023 ZNF710Q8N1W2 664 aa11.28□□□□□ -0.6
KRR1-203ENST00000550023 DCAF8Q5TAQ9 597 aa11.27□□□□□ -0.61
KRR1-203ENST00000550023 PCDHB8Q9UN66 801 aa11.27□□□□□ -0.61
KRR1-203ENST00000550023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.25□□□□□ -0.615e-6■□□□□ 10.6
KRR1-203ENST00000550023 G3V3G9 751 aa11.24□□□□□ -0.61
KRR1-203ENST00000550023 HOXB1P14653 301 aaPredicted RBP11.23□□□□□ -0.61
KRR1-203ENST00000550023 PTGER2P43116 358 aa11.2□□□□□ -0.62
KRR1-203ENST00000550023 DOK7Q18PE1 504 aa11.2□□□□□ -0.62
KRR1-203ENST00000550023 RIMBP2O15034 1052 aa11.17□□□□□ -0.62
KRR1-203ENST00000550023 HOXB3P14651 431 aaPredicted RBP11.17□□□□□ -0.62
KRR1-203ENST00000550023 ZNF467Q7Z7K2 595 aaPredicted RBP11.17□□□□□ -0.62
KRR1-203ENST00000550023 VARS2Q5ST30 1063 aaKnown RBP11.14□□□□□ -0.63
KRR1-203ENST00000550023 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
KRR1-203ENST00000550023 ZNF687Q8N1G0 1237 aa11.08□□□□□ -0.64
KRR1-203ENST00000550023 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
KRR1-203ENST00000550023 PSEN1P49768 467 aa11.06□□□□□ -0.64
KRR1-203ENST00000550023 DPY19L2Q6NUT2 758 aa11.04□□□□□ -0.64
KRR1-203ENST00000550023 ILDR1Q86SU0 546 aaPredicted RBP11.04□□□□□ -0.64
KRR1-203ENST00000550023 GSE1Q14687 1217 aa11.01□□□□□ -0.65
KRR1-203ENST00000550023 ANKRD13DQ6ZTN6 518 aa11.01□□□□□ -0.65
KRR1-203ENST00000550023 ZSWIM6Q9HCJ5 1215 aa11.01□□□□□ -0.65
KRR1-203ENST00000550023 PLA2G2EQ9NZK7 142 aa10.99□□□□□ -0.65
KRR1-203ENST00000550023 PDAP1Q13442 181 aaKnown RBP10.94□□□□□ -0.66
KRR1-203ENST00000550023 CHRM1P11229 460 aaPredicted RBP10.93□□□□□ -0.66
KRR1-203ENST00000550023 CABP2Q9NPB3 220 aa10.93□□□□□ -0.66
KRR1-203ENST00000550023 LSM11P83369 360 aaKnown RBP eCLIP10.88□□□□□ -0.67
KRR1-203ENST00000550023 HCSTQ9UBK5 93 aa10.88□□□□□ -0.67
KRR1-203ENST00000550023 GPR153Q6NV75 609 aa10.87□□□□□ -0.67
KRR1-203ENST00000550023 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
KRR1-203ENST00000550023 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
KRR1-203ENST00000550023 ARSIQ5FYB1 569 aa10.78□□□□□ -0.68
KRR1-203ENST00000550023 FBXO3Q9UK99 471 aa10.78□□□□□ -0.68
KRR1-203ENST00000550023 PBX2P40425 430 aa10.77□□□□□ -0.69
KRR1-203ENST00000550023 MICALL2Q8IY33 904 aa10.74□□□□□ -0.69
KRR1-203ENST00000550023 TMEM92Q6UXU6 159 aa10.73□□□□□ -0.69
KRR1-203ENST00000550023 IRX2Q9BZI1 471 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms