RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 KIF12Q96FN5 646 aa12.52□□□□□ -0.41
EFCAB2-215ENST00000549220 LHX8Q68G74 356 aa12.51□□□□□ -0.41
EFCAB2-215ENST00000549220 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
EFCAB2-215ENST00000549220 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
EFCAB2-215ENST00000549220 DCBLD2Q96PD2 775 aa12.48□□□□□ -0.41
EFCAB2-215ENST00000549220 ASTLQ6HA08 431 aaPredicted RBP12.45□□□□□ -0.42
EFCAB2-215ENST00000549220 TRPC6Q9Y210 931 aa12.45□□□□□ -0.42
EFCAB2-215ENST00000549220 POTEB2H3BUK9 544 aa12.42□□□□□ -0.42
EFCAB2-215ENST00000549220 MAP3K13O43283 966 aa12.42□□□□□ -0.42
EFCAB2-215ENST00000549220 ATMINO43313 823 aaPredicted RBP12.42□□□□□ -0.42
EFCAB2-215ENST00000549220 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
EFCAB2-215ENST00000549220 FBXO3Q9UK99 471 aa12.41□□□□□ -0.42
EFCAB2-215ENST00000549220 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
EFCAB2-215ENST00000549220 ZBTB47Q9UFB7 747 aaPredicted RBP12.37□□□□□ -0.43
EFCAB2-215ENST00000549220 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
EFCAB2-215ENST00000549220 ATN1P54259 1190 aaPredicted RBP12.33□□□□□ -0.44
EFCAB2-215ENST00000549220 POTEJP0CG39 1038 aa12.31□□□□□ -0.44
EFCAB2-215ENST00000549220 POTEFA5A3E0 1075 aa12.3□□□□□ -0.44
EFCAB2-215ENST00000549220 SGIP1Q9BQI5 828 aa12.3□□□□□ -0.44
EFCAB2-215ENST00000549220 TIE1P35590 1138 aa12.27□□□□□ -0.45
EFCAB2-215ENST00000549220 IFNLR1Q8IU57 520 aaPredicted RBP12.27□□□□□ -0.45
EFCAB2-215ENST00000549220 OTUD5Q96G74 571 aa12.27□□□□□ -0.45
EFCAB2-215ENST00000549220 IFNL1Q8IU54 200 aa12.26□□□□□ -0.45
EFCAB2-215ENST00000549220 FAM212AQ96EL1 285 aa12.25□□□□□ -0.45
EFCAB2-215ENST00000549220 TTLL13PA6NNM8 815 aa12.24□□□□□ -0.45
EFCAB2-215ENST00000549220 ABCC9O60706 1549 aa12.24□□□□□ -0.45
EFCAB2-215ENST00000549220 METRNQ9UJH8 293 aa12.24□□□□□ -0.45
EFCAB2-215ENST00000549220 PCDHB13Q9Y5F0 798 aa12.23□□□□□ -0.45
EFCAB2-215ENST00000549220 C7P10643 843 aa12.22□□□□□ -0.45
EFCAB2-215ENST00000549220 SLC39A7Q92504 469 aa12.22□□□□□ -0.45
EFCAB2-215ENST00000549220 DCAF8Q5TAQ9 597 aa12.18□□□□□ -0.46
EFCAB2-215ENST00000549220 PYGBP11216 843 aa12.17□□□□□ -0.46
EFCAB2-215ENST00000549220 COLQQ9Y215 455 aaPredicted RBP12.15□□□□□ -0.46
EFCAB2-215ENST00000549220 KLHL34Q8N239 644 aa12.13□□□□□ -0.47
EFCAB2-215ENST00000549220 CHRM1P11229 460 aaPredicted RBP12.12□□□□□ -0.47
EFCAB2-215ENST00000549220 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
EFCAB2-215ENST00000549220 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
EFCAB2-215ENST00000549220 GSE1Q14687 1217 aa12.08□□□□□ -0.48
EFCAB2-215ENST00000549220 SPOCK2Q92563 424 aa12.07□□□□□ -0.48
EFCAB2-215ENST00000549220 TMEM106CQ9BVX2 250 aa12.06□□□□□ -0.48
EFCAB2-215ENST00000549220 IER5LQ5T953 404 aa12.05□□□□□ -0.48
EFCAB2-215ENST00000549220 IRX5P78411 483 aaPredicted RBP12.03□□□□□ -0.48
EFCAB2-215ENST00000549220 LCE2DQ5TA82 110 aaPredicted RBP11.96□□□□□ -0.49
EFCAB2-215ENST00000549220 ZNF467Q7Z7K2 595 aaPredicted RBP11.95□□□□□ -0.5
EFCAB2-215ENST00000549220 MAMSTRQ6ZN01 415 aa11.92□□□□□ -0.5
EFCAB2-215ENST00000549220 ILDR1Q86SU0 546 aaPredicted RBP11.91□□□□□ -0.5
EFCAB2-215ENST00000549220 SEC24BO95487 1268 aa11.9□□□□□ -0.5
EFCAB2-215ENST00000549220 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
EFCAB2-215ENST00000549220 CIZ1Q9ULV3 898 aaPredicted RBP11.9□□□□□ -0.5
EFCAB2-215ENST00000549220 PSEN1P49768 467 aa11.89□□□□□ -0.51
EFCAB2-215ENST00000549220 OCEL1Q9H607 264 aa11.87□□□□□ -0.51
EFCAB2-215ENST00000549220 RNF25Q96BH1 459 aaPredicted RBP11.86□□□□□ -0.51
EFCAB2-215ENST00000549220 SCUBE2Q9NQ36 999 aa11.85□□□□□ -0.51
EFCAB2-215ENST00000549220 PDAP1Q13442 181 aaKnown RBP11.84□□□□□ -0.51
EFCAB2-215ENST00000549220 DCAF8L2P0C7V8 631 aa11.83□□□□□ -0.52
EFCAB2-215ENST00000549220 PLCG2P16885 1265 aa11.83□□□□□ -0.52
EFCAB2-215ENST00000549220 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
EFCAB2-215ENST00000549220 RB1CC1Q8TDY2 1594 aa11.77□□□□□ -0.53
EFCAB2-215ENST00000549220 POTEMA6NI47 508 aa11.74□□□□□ -0.53
EFCAB2-215ENST00000549220 DPY19L2Q6NUT2 758 aa11.73□□□□□ -0.53
EFCAB2-215ENST00000549220 POTEGQ6S5H5 508 aa11.73□□□□□ -0.53
EFCAB2-215ENST00000549220 CABP2Q9NPB3 220 aa11.72□□□□□ -0.53
EFCAB2-215ENST00000549220 NACADO15069 1562 aa11.71□□□□□ -0.53
EFCAB2-215ENST00000549220 MKRN3Q13064 507 aaKnown RBP11.71□□□□□ -0.53
EFCAB2-215ENST00000549220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.71□□□□□ -0.53
EFCAB2-215ENST00000549220 ZCCHC6Q5VYS8 1495 aaKnown RBP11.7□□□□□ -0.54
EFCAB2-215ENST00000549220 SLAIN1Q8ND83 568 aa11.7□□□□□ -0.54
EFCAB2-215ENST00000549220 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
EFCAB2-215ENST00000549220 PKD2Q13563 968 aa11.68□□□□□ -0.54
EFCAB2-215ENST00000549220 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
EFCAB2-215ENST00000549220 RIOK3O14730 519 aaKnown RBP11.67□□□□□ -0.54
EFCAB2-215ENST00000549220 EFCAB3Q8N7B9 438 aa11.66□□□□□ -0.54
EFCAB2-215ENST00000549220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
EFCAB2-215ENST00000549220 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
EFCAB2-215ENST00000549220 GOLGA2Q08379 1002 aa11.63□□□□□ -0.55
EFCAB2-215ENST00000549220 TMEM121BQ9BXQ6 578 aaPredicted RBP11.62□□□□□ -0.55
EFCAB2-215ENST00000549220 ST18O60284 1047 aa11.61□□□□□ -0.55
EFCAB2-215ENST00000549220 L3MBTL3Q96JM7 780 aaPredicted RBP11.61□□□□□ -0.55
EFCAB2-215ENST00000549220 MS4A4AQ96JQ5 239 aa11.61□□□□□ -0.55
EFCAB2-215ENST00000549220 VGFO15240 615 aaPredicted RBP11.6□□□□□ -0.55
EFCAB2-215ENST00000549220 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.6□□□□□ -0.55
EFCAB2-215ENST00000549220 BOLA1Q9Y3E2 137 aa11.55□□□□□ -0.56
EFCAB2-215ENST00000549220 MYO15BQ96JP2 1530 aa11.55□□□□□ -0.56
EFCAB2-215ENST00000549220 DCAF1Q9Y4B6 1507 aa11.55□□□□□ -0.56
EFCAB2-215ENST00000549220 RGL2O15211 777 aa11.54□□□□□ -0.56
EFCAB2-215ENST00000549220 SCRIBQ14160 1630 aa11.53□□□□□ -0.56
EFCAB2-215ENST00000549220 SOX12O15370 315 aa11.52□□□□□ -0.57
EFCAB2-215ENST00000549220 TMEM92Q6UXU6 159 aa11.52□□□□□ -0.57
EFCAB2-215ENST00000549220 FBXO22Q8NEZ5 403 aa11.52□□□□□ -0.57
EFCAB2-215ENST00000549220 PHF8Q9UPP1 1060 aa11.52□□□□□ -0.57
EFCAB2-215ENST00000549220 ECM2O94769 699 aaPredicted RBP11.5□□□□□ -0.57
EFCAB2-215ENST00000549220 C3orf67Q6ZVT6 689 aa11.5□□□□□ -0.57
EFCAB2-215ENST00000549220 PCDH10Q9P2E7 1040 aa11.5□□□□□ -0.57
EFCAB2-215ENST00000549220 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
EFCAB2-215ENST00000549220 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
EFCAB2-215ENST00000549220 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
EFCAB2-215ENST00000549220 MFRPQ9BY79 579 aa11.47□□□□□ -0.57
EFCAB2-215ENST00000549220 SNPHO15079 494 aa11.43□□□□□ -0.58
EFCAB2-215ENST00000549220 POTEB3A0JP26 581 aa11.42□□□□□ -0.58
EFCAB2-215ENST00000549220 POTEBQ6S5H4 581 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms