RNA–Protein interactions for RNA: ENST00000549194.1

GNPTAB-204, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 570 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-204ENST00000549194 METRNQ9UJH8 293 aa14.94□□□□□ -0.02
GNPTAB-204ENST00000549194 SLC39A7Q92504 469 aa14.92□□□□□ -0.02
GNPTAB-204ENST00000549194 ASTLQ6HA08 431 aaPredicted RBP14.91□□□□□ -0.02
GNPTAB-204ENST00000549194 C7P10643 843 aa14.9□□□□□ -0.02
GNPTAB-204ENST00000549194 LCE2DQ5TA82 110 aaPredicted RBP14.89□□□□□ -0.03
GNPTAB-204ENST00000549194 POTEJP0CG39 1038 aa14.88□□□□□ -0.03
GNPTAB-204ENST00000549194 NPM1P06748 294 aaKnown RBP eCLIP14.84□□□□□ -0.03
GNPTAB-204ENST00000549194 ATMINO43313 823 aaPredicted RBP14.83□□□□□ -0.04
GNPTAB-204ENST00000549194 FAM163AQ96GL9 167 aaPredicted RBP14.81□□□□□ -0.04
GNPTAB-204ENST00000549194 SCUBE2Q9NQ36 999 aa14.8□□□□□ -0.04
GNPTAB-204ENST00000549194 MS4A3Q96HJ5 214 aa14.78□□□□□ -0.04
GNPTAB-204ENST00000549194 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
GNPTAB-204ENST00000549194 ZCCHC6Q5VYS8 1495 aaKnown RBP14.7□□□□□ -0.06
GNPTAB-204ENST00000549194 RB1CC1Q8TDY2 1594 aa14.7□□□□□ -0.06
GNPTAB-204ENST00000549194 DCAF8L2P0C7V8 631 aa14.7□□□□□ -0.06
GNPTAB-204ENST00000549194 NACADO15069 1562 aa14.69□□□□□ -0.06
GNPTAB-204ENST00000549194 ATN1P54259 1190 aaPredicted RBP14.62□□□□□ -0.07
GNPTAB-204ENST00000549194 CDAN1Q8IWY9 1227 aa14.6□□□□□ -0.07
GNPTAB-204ENST00000549194 MYO15BQ96JP2 1530 aa14.59□□□□□ -0.07
GNPTAB-204ENST00000549194 FKBP8Q14318 412 aa14.58□□□□□ -0.08
GNPTAB-204ENST00000549194 DCAF1Q9Y4B6 1507 aa14.57□□□□□ -0.08
GNPTAB-204ENST00000549194 POTEFA5A3E0 1075 aa14.55□□□□□ -0.08
GNPTAB-204ENST00000549194 SPDYE4A6NLX3 237 aa14.52□□□□□ -0.09
GNPTAB-204ENST00000549194 BMP2KQ9NSY1 1161 aaPredicted RBP14.48□□□□□ -0.09
GNPTAB-204ENST00000549194 CCDC61Q9Y6R9 512 aa14.48□□□□□ -0.09
GNPTAB-204ENST00000549194 UNC13AQ9UPW8 1703 aa14.48□□□□□ -0.09
GNPTAB-204ENST00000549194 TSPYL2Q9H2G4 693 aaPredicted RBP14.46□□□□□ -0.09
GNPTAB-204ENST00000549194 KIF12Q96FN5 646 aa14.45□□□□□ -0.1
GNPTAB-204ENST00000549194 TIE1P35590 1138 aa14.43□□□□□ -0.1
GNPTAB-204ENST00000549194 SEC24BO95487 1268 aa14.37□□□□□ -0.11
GNPTAB-204ENST00000549194 TRPC6Q9Y210 931 aa14.37□□□□□ -0.11
GNPTAB-204ENST00000549194 COLQQ9Y215 455 aaPredicted RBP14.36□□□□□ -0.11
GNPTAB-204ENST00000549194 SCRIBQ14160 1630 aa14.33□□□□□ -0.11
GNPTAB-204ENST00000549194 ST18O60284 1047 aa14.32□□□□□ -0.12
GNPTAB-204ENST00000549194 MMRN1Q13201 1228 aa14.32□□□□□ -0.12
GNPTAB-204ENST00000549194 MAP3K13O43283 966 aa14.29□□□□□ -0.12
GNPTAB-204ENST00000549194 IER5LQ5T953 404 aa14.29□□□□□ -0.12
GNPTAB-204ENST00000549194 TTLL13PA6NNM8 815 aa14.28□□□□□ -0.12
GNPTAB-204ENST00000549194 SPNS2Q8IVW8 549 aa14.26□□□□□ -0.13
GNPTAB-204ENST00000549194 PROM2Q8N271 834 aa14.26□□□□□ -0.13
GNPTAB-204ENST00000549194 SLAIN1Q8ND83 568 aa14.26□□□□□ -0.13
GNPTAB-204ENST00000549194 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
GNPTAB-204ENST00000549194 TRIM35Q9UPQ4 493 aa14.2□□□□□ -0.14
GNPTAB-204ENST00000549194 TMEM121BQ9BXQ6 578 aaPredicted RBP14.18□□□□□ -0.14
GNPTAB-204ENST00000549194 SGIP1Q9BQI5 828 aa14.14□□□□□ -0.15
GNPTAB-204ENST00000549194 RASEFQ8IZ41 740 aa14.1□□□□□ -0.15
GNPTAB-204ENST00000549194 FBXO3Q9UK99 471 aa14.1□□□□□ -0.15
GNPTAB-204ENST00000549194 SHROOM4Q9ULL8 1493 aa14.07□□□□□ -0.16
GNPTAB-204ENST00000549194 PLEKHG5O94827 1062 aa14.07□□□□□ -0.16
GNPTAB-204ENST00000549194 SNPHO15079 494 aa14.06□□□□□ -0.16
GNPTAB-204ENST00000549194 PLCG2P16885 1265 aa14.05□□□□□ -0.16
GNPTAB-204ENST00000549194 PCDHB13Q9Y5F0 798 aa14.05□□□□□ -0.16
GNPTAB-204ENST00000549194 IRX5P78411 483 aaPredicted RBP13.97□□□□□ -0.17
GNPTAB-204ENST00000549194 MIER1Q8N108 512 aa13.95□□□□□ -0.18
GNPTAB-204ENST00000549194 MARVELD3Q96A59 401 aa13.95□□□□□ -0.18
GNPTAB-204ENST00000549194 TMEM106CQ9BVX2 250 aa13.95□□□□□ -0.18
GNPTAB-204ENST00000549194 IFNL1Q8IU54 200 aa13.93□□□□□ -0.18
GNPTAB-204ENST00000549194 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.91□□□□□ -0.18
GNPTAB-204ENST00000549194 OCEL1Q9H607 264 aa13.89□□□□□ -0.19
GNPTAB-204ENST00000549194 EIF4G1Q04637 1599 aaKnown RBP13.88□□□□□ -0.19
GNPTAB-204ENST00000549194 VASPP50552 380 aaPredicted RBP13.86□□□□□ -0.19
GNPTAB-204ENST00000549194 EMP3P54852 163 aa13.83□□□□□ -0.2
GNPTAB-204ENST00000549194 KRTAP3-3Q9BYR6 98 aa13.82□□□□□ -0.2
GNPTAB-204ENST00000549194 KRTAP3-2Q9BYR7 98 aa13.82□□□□□ -0.2
GNPTAB-204ENST00000549194 CC2D2AQ9P2K1 1620 aa13.81□□□□□ -0.2
GNPTAB-204ENST00000549194 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
GNPTAB-204ENST00000549194 NUBP1P53384 320 aa13.78□□□□□ -0.2
GNPTAB-204ENST00000549194 ZBTB47Q9UFB7 747 aaPredicted RBP13.77□□□□□ -0.21
GNPTAB-204ENST00000549194 HS3ST6Q96QI5 342 aa13.76□□□□□ -0.21
GNPTAB-204ENST00000549194 PLCD3Q8N3E9 789 aa13.74□□□□□ -0.21
GNPTAB-204ENST00000549194 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
GNPTAB-204ENST00000549194 CECR2Q9BXF3 1484 aa13.72□□□□□ -0.21
GNPTAB-204ENST00000549194 POTEB3A0JP26 581 aa13.71□□□□□ -0.21
GNPTAB-204ENST00000549194 POTEBQ6S5H4 581 aa13.71□□□□□ -0.21
GNPTAB-204ENST00000549194 FAM205CA6NFA0 338 aa13.7□□□□□ -0.22
GNPTAB-204ENST00000549194 SMARCA4P51532 1647 aa13.7□□□□□ -0.22
GNPTAB-204ENST00000549194 C3orf67Q6ZVT6 689 aa13.68□□□□□ -0.22
GNPTAB-204ENST00000549194 BAZ1AQ9NRL2 1556 aaPredicted RBP13.67□□□□□ -0.22
GNPTAB-204ENST00000549194 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
GNPTAB-204ENST00000549194 L3MBTL3Q96JM7 780 aaPredicted RBP13.63□□□□□ -0.23
GNPTAB-204ENST00000549194 KLHL34Q8N239 644 aa13.62□□□□□ -0.23
GNPTAB-204ENST00000549194 PDCD7Q8N8D1 485 aaKnown RBP13.62□□□□□ -0.23
GNPTAB-204ENST00000549194 MROH2BQ7Z745 1585 aa13.6□□□□□ -0.23
GNPTAB-204ENST00000549194 SMARCA2P51531 1590 aa13.57□□□□□ -0.24
GNPTAB-204ENST00000549194 ATAD2BQ9ULI0 1458 aa13.55□□□□□ -0.24
GNPTAB-204ENST00000549194 HRCP23327 699 aa13.55□□□□□ -0.24
GNPTAB-204ENST00000549194 RNF166Q96A37 237 aaPredicted RBP13.53□□□□□ -0.24
GNPTAB-204ENST00000549194 PEG3Q9GZU2 1588 aa13.53□□□□□ -0.24
GNPTAB-204ENST00000549194 SPOCK2Q92563 424 aa13.52□□□□□ -0.25
GNPTAB-204ENST00000549194 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
GNPTAB-204ENST00000549194 PYGBP11216 843 aa13.51□□□□□ -0.25
GNPTAB-204ENST00000549194 PCDHB8Q9UN66 801 aa13.51□□□□□ -0.25
GNPTAB-204ENST00000549194 WIZO95785 1651 aa13.5□□□□□ -0.25
GNPTAB-204ENST00000549194 AMER1Q5JTC6 1135 aaPredicted RBP13.5□□□□□ -0.25
GNPTAB-204ENST00000549194 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
GNPTAB-204ENST00000549194 MKRN3Q13064 507 aaKnown RBP13.48□□□□□ -0.25
GNPTAB-204ENST00000549194 GOLGA2Q08379 1002 aa13.47□□□□□ -0.25
GNPTAB-204ENST00000549194 BAZ1BQ9UIG0 1483 aaKnown RBP13.47□□□□□ -0.25
GNPTAB-204ENST00000549194 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
GNPTAB-204ENST00000549194 RSF1Q96T23 1441 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms