RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 ZBTB47Q9UFB7 747 aaPredicted RBP7.43□□□□□ -1.22
APAF1-208ENST00000549007 GTPBP6O43824 516 aaPredicted RBP7.43□□□□□ -1.22
APAF1-208ENST00000549007 NUBP1P53384 320 aa7.42□□□□□ -1.22
APAF1-208ENST00000549007 TULP1O00294 542 aaPredicted RBP7.42□□□□□ -1.22
APAF1-208ENST00000549007 DNAJC5Q9H3Z4 198 aa7.42□□□□□ -1.22
APAF1-208ENST00000549007 POTEDQ86YR6 584 aa7.41□□□□□ -1.22
APAF1-208ENST00000549007 CLEC11AQ9Y240 323 aa7.4□□□□□ -1.23
APAF1-208ENST00000549007 RIOK3O14730 519 aaKnown RBP7.39□□□□□ -1.23
APAF1-208ENST00000549007 BCL11BQ9C0K0 894 aaPredicted RBP7.37□□□□□ -1.23
APAF1-208ENST00000549007 PYGBP11216 843 aa7.36□□□□□ -1.23
APAF1-208ENST00000549007 RASEFQ8IZ41 740 aa7.36□□□□□ -1.23
APAF1-208ENST00000549007 STK24Q9Y6E0 443 aa7.36□□□□□ -1.23
APAF1-208ENST00000549007 GSE1Q14687 1217 aa7.36□□□□□ -1.23
APAF1-208ENST00000549007 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.35□□□□□ -1.23
APAF1-208ENST00000549007 ZFP91Q96JP5 570 aaPredicted RBP7.35□□□□□ -1.23
APAF1-208ENST00000549007 TRIM41Q8WV44 630 aa7.34□□□□□ -1.23
APAF1-208ENST00000549007 CCDC180Q9P1Z9 1646 aa7.33□□□□□ -1.24
APAF1-208ENST00000549007 CREBZFQ9NS37 354 aa7.32□□□□□ -1.24
APAF1-208ENST00000549007 MNX1P50219 401 aaPredicted RBP7.32□□□□□ -1.24
APAF1-208ENST00000549007 FAM212AQ96EL1 285 aa7.32□□□□□ -1.24
APAF1-208ENST00000549007 VGFO15240 615 aaPredicted RBP7.29□□□□□ -1.24
APAF1-208ENST00000549007 CADPS2Q86UW7 1296 aa7.29□□□□□ -1.24
APAF1-208ENST00000549007 GTF3C3Q9Y5Q9 886 aa7.29□□□□□ -1.24
APAF1-208ENST00000549007 PRR29P0C7W0 189 aa7.28□□□□□ -1.24
APAF1-208ENST00000549007 CACNB1Q02641 598 aaPredicted RBP7.28□□□□□ -1.24
APAF1-208ENST00000549007 KCNV2Q8TDN2 545 aa7.26□□□□□ -1.25
APAF1-208ENST00000549007 SPDYE1Q8NFV5 336 aaPredicted RBP7.25□□□□□ -1.25
APAF1-208ENST00000549007 TSPYL2Q9H2G4 693 aaPredicted RBP7.22□□□□□ -1.25
APAF1-208ENST00000549007 CHADLQ6NUI6 762 aa7.22□□□□□ -1.25
APAF1-208ENST00000549007 ABCC9O60706 1549 aa7.22□□□□□ -1.25
APAF1-208ENST00000549007 REM2Q8IYK8 340 aaPredicted RBP7.21□□□□□ -1.26
APAF1-208ENST00000549007 PCDHB8Q9UN66 801 aa7.2□□□□□ -1.26
APAF1-208ENST00000549007 PCDHB13Q9Y5F0 798 aa7.2□□□□□ -1.26
APAF1-208ENST00000549007 LMOD2Q6P5Q4 547 aa7.2□□□□□ -1.26
APAF1-208ENST00000549007 PITPNM1O00562 1244 aa7.16□□□□□ -1.26
APAF1-208ENST00000549007 CHRM1P11229 460 aaPredicted RBP7.16□□□□□ -1.26
APAF1-208ENST00000549007 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.16□□□□□ -1.26
APAF1-208ENST00000549007 AKT1S1Q96B36 256 aa7.16□□□□□ -1.26
APAF1-208ENST00000549007 TMEM132AQ24JP5 1023 aa7.15□□□□□ -1.26
APAF1-208ENST00000549007 WDR70Q9NW82 654 aa7.15□□□□□ -1.26
APAF1-208ENST00000549007 PPP1R37O75864 691 aa7.15□□□□□ -1.26
APAF1-208ENST00000549007 P3H3Q8IVL6 736 aa7.14□□□□□ -1.27
APAF1-208ENST00000549007 MFRPQ9BY79 579 aa7.14□□□□□ -1.27
APAF1-208ENST00000549007 BRPF1P55201 1214 aaPredicted RBP7.12□□□□□ -1.27
APAF1-208ENST00000549007 C14orf37Q86TY3 774 aa7.12□□□□□ -1.27
APAF1-208ENST00000549007 SGIP1Q9BQI5 828 aa7.12□□□□□ -1.27
APAF1-208ENST00000549007 SEMA3EO15041 775 aa7.12□□□□□ -1.27
APAF1-208ENST00000549007 RYDENQ9NUL5 291 aaKnown RBP7.1□□□□□ -1.27
APAF1-208ENST00000549007 RBM42Q9BTD8 480 aaKnown RBP7.1□□□□□ -1.27
APAF1-208ENST00000549007 SLC24A3Q9HC58 644 aa7.09□□□□□ -1.27
APAF1-208ENST00000549007 PDAP1Q13442 181 aaKnown RBP7.07□□□□□ -1.28
APAF1-208ENST00000549007 NEUROD2Q15784 382 aa7.07□□□□□ -1.28
APAF1-208ENST00000549007 SUPT5HO00267 1087 aaKnown RBP7.07□□□□□ -1.28
APAF1-208ENST00000549007 PSEN1P49768 467 aa7.07□□□□□ -1.28
APAF1-208ENST00000549007 ZC3H15Q8WU90 426 aaKnown RBP7.07□□□□□ -1.28
APAF1-208ENST00000549007 EFCAB3Q8N7B9 438 aa7.06□□□□□ -1.28
APAF1-208ENST00000549007 ZNF467Q7Z7K2 595 aaPredicted RBP7.06□□□□□ -1.28
APAF1-208ENST00000549007 CABP2Q9NPB3 220 aa7.06□□□□□ -1.28
APAF1-208ENST00000549007 PHF8Q9UPP1 1060 aa7.06□□□□□ -1.28
APAF1-208ENST00000549007 IFNL1Q8IU54 200 aa7.04□□□□□ -1.28
APAF1-208ENST00000549007 FARP1Q9Y4F1 1045 aaPredicted RBP7.03□□□□□ -1.28
APAF1-208ENST00000549007 CCDC61Q9Y6R9 512 aa7.03□□□□□ -1.28
APAF1-208ENST00000549007 E2F4Q16254 413 aa7.02□□□□□ -1.29
APAF1-208ENST00000549007 NCKAP5LQ9HCH0 1330 aa7.01□□□□□ -1.29
APAF1-208ENST00000549007 FBXO22Q8NEZ5 403 aa7.01□□□□□ -1.29
APAF1-208ENST00000549007 MAP3K13O43283 966 aa7□□□□□ -1.29
APAF1-208ENST00000549007 LARP6Q9BRS8 491 aaKnown RBP6.99□□□□□ -1.29
APAF1-208ENST00000549007 GPBP1L1Q9HC44 474 aaPredicted RBP6.99□□□□□ -1.29
APAF1-208ENST00000549007 PRKAR2AP13861 404 aaKnown RBP6.98□□□□□ -1.29
APAF1-208ENST00000549007 ARHGEF1Q92888 912 aaKnown RBP6.98□□□□□ -1.29
APAF1-208ENST00000549007 ZCCHC6Q5VYS8 1495 aaKnown RBP6.98□□□□□ -1.29
APAF1-208ENST00000549007 TESPA1A2RU30 521 aaPredicted RBP6.97□□□□□ -1.29
APAF1-208ENST00000549007 ARXQ96QS3 562 aa6.97□□□□□ -1.29
APAF1-208ENST00000549007 MS4A4AQ96JQ5 239 aa6.96□□□□□ -1.3
APAF1-208ENST00000549007 RBM26Q5T8P6 1007 aaKnown RBP6.95□□□□□ -1.3
APAF1-208ENST00000549007 ZNF579Q8NAF0 562 aaKnown RBP6.95□□□□□ -1.3
APAF1-208ENST00000549007 MLLT3P42568 568 aaPredicted RBP6.95□□□□□ -1.3
APAF1-208ENST00000549007 NLRP6P59044 892 aa6.93□□□□□ -1.3
APAF1-208ENST00000549007 TRPC6Q9Y210 931 aa6.92□□□□□ -1.3
APAF1-208ENST00000549007 ZMYND10O75800 440 aa6.92□□□□□ -1.3
APAF1-208ENST00000549007 KIF12Q96FN5 646 aa6.92□□□□□ -1.3
APAF1-208ENST00000549007 IL27Q8NEV9 243 aa6.91□□□□□ -1.3
APAF1-208ENST00000549007 PHF12Q96QT6 1004 aa6.91□□□□□ -1.3
APAF1-208ENST00000549007 HOMEZQ8IX15 550 aa6.9□□□□□ -1.3
APAF1-208ENST00000549007 DDX27Q96GQ7 796 aaKnown RBP6.9□□□□□ -1.31
APAF1-208ENST00000549007 RB1CC1Q8TDY2 1594 aa6.89□□□□□ -1.31
APAF1-208ENST00000549007 NACADO15069 1562 aa6.88□□□□□ -1.31
APAF1-208ENST00000549007 CRISPLD2Q9H0B8 497 aa6.88□□□□□ -1.31
APAF1-208ENST00000549007 DAXXQ9UER7 740 aaPredicted RBP6.88□□□□□ -1.31
APAF1-208ENST00000549007 SOX12O15370 315 aa6.87□□□□□ -1.31
APAF1-208ENST00000549007 ERICH6Q7L0X2 663 aa6.86□□□□□ -1.31
APAF1-208ENST00000549007 PAK3O75914 559 aaPredicted RBP6.85□□□□□ -1.31
APAF1-208ENST00000549007 PDE4AP27815 886 aa6.85□□□□□ -1.31
APAF1-208ENST00000549007 KRI1Q8N9T8 703 aaKnown RBP6.85□□□□□ -1.31
APAF1-208ENST00000549007 DCAF1Q9Y4B6 1507 aa6.85□□□□□ -1.31
APAF1-208ENST00000549007 DPYSL4O14531 572 aa6.85□□□□□ -1.31
APAF1-208ENST00000549007 BARGINQ6ZT62 677 aa6.85□□□□□ -1.31
APAF1-208ENST00000549007 GPIHBP1Q8IV16 184 aa6.85□□□□□ -1.31
APAF1-208ENST00000549007 ZRANB1Q9UGI0 708 aa6.85□□□□□ -1.31
APAF1-208ENST00000549007 TMEM106CQ9BVX2 250 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms