RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
CEP290-204ENST00000547926 PAK3O75914 559 aaPredicted RBP10.06□□□□□ -0.8
CEP290-204ENST00000547926 POTEFA5A3E0 1075 aa10.04□□□□□ -0.8
CEP290-204ENST00000547926 FAM163AQ96GL9 167 aaPredicted RBP10.03□□□□□ -0.8
CEP290-204ENST00000547926 ATN1P54259 1190 aaPredicted RBP10.03□□□□□ -0.8
CEP290-204ENST00000547926 TRPC6Q9Y210 931 aa10.03□□□□□ -0.8
CEP290-204ENST00000547926 C7P10643 843 aa10□□□□□ -0.81
CEP290-204ENST00000547926 SLC39A7Q92504 469 aa9.99□□□□□ -0.81
CEP290-204ENST00000547926 TSPYL2Q9H2G4 693 aaPredicted RBP9.99□□□□□ -0.81
CEP290-204ENST00000547926 NPM1P06748 294 aaKnown RBP eCLIP9.97□□□□□ -0.81
CEP290-204ENST00000547926 CCDC61Q9Y6R9 512 aa9.94□□□□□ -0.82
CEP290-204ENST00000547926 BMP2KQ9NSY1 1161 aaPredicted RBP9.92□□□□□ -0.82
CEP290-204ENST00000547926 PCDH10Q9P2E7 1040 aa9.92□□□□□ -0.82
CEP290-204ENST00000547926 KIF12Q96FN5 646 aa9.9□□□□□ -0.82
CEP290-204ENST00000547926 COLQQ9Y215 455 aaPredicted RBP9.9□□□□□ -0.82
CEP290-204ENST00000547926 MAMSTRQ6ZN01 415 aa9.88□□□□□ -0.83
CEP290-204ENST00000547926 SCUBE2Q9NQ36 999 aa9.86□□□□□ -0.83
CEP290-204ENST00000547926 MAP3K13O43283 966 aa9.86□□□□□ -0.83
CEP290-204ENST00000547926 CDAN1Q8IWY9 1227 aa9.82□□□□□ -0.84
CEP290-204ENST00000547926 RASEFQ8IZ41 740 aa9.8□□□□□ -0.84
CEP290-204ENST00000547926 TTLL13PA6NNM8 815 aa9.79□□□□□ -0.84
CEP290-204ENST00000547926 EHMT2Q96KQ7 1210 aa9.76□□□□□ -0.85
CEP290-204ENST00000547926 PROM2Q8N271 834 aa9.75□□□□□ -0.85
CEP290-204ENST00000547926 TIE1P35590 1138 aa9.74□□□□□ -0.85
CEP290-204ENST00000547926 ST18O60284 1047 aa9.73□□□□□ -0.85
CEP290-204ENST00000547926 TRIM35Q9UPQ4 493 aa9.72□□□□□ -0.85
CEP290-204ENST00000547926 SEC24BO95487 1268 aa9.71□□□□□ -0.85
CEP290-204ENST00000547926 SLAIN1Q8ND83 568 aa9.67□□□□□ -0.86
CEP290-204ENST00000547926 MIER1Q8N108 512 aa9.65□□□□□ -0.86
CEP290-204ENST00000547926 IFNL1Q8IU54 200 aa9.63□□□□□ -0.87
CEP290-204ENST00000547926 PCDHB13Q9Y5F0 798 aa9.63□□□□□ -0.87
CEP290-204ENST00000547926 MMRN1Q13201 1228 aa9.62□□□□□ -0.87
CEP290-204ENST00000547926 SPNS2Q8IVW8 549 aa9.6□□□□□ -0.87
CEP290-204ENST00000547926 MARVELD3Q96A59 401 aa9.59□□□□□ -0.87
CEP290-204ENST00000547926 IER5LQ5T953 404 aa9.58□□□□□ -0.88
CEP290-204ENST00000547926 TMEM106CQ9BVX2 250 aa9.56□□□□□ -0.88
CEP290-204ENST00000547926 NUBP1P53384 320 aa9.56□□□□□ -0.88
CEP290-204ENST00000547926 IRX5P78411 483 aaPredicted RBP9.55□□□□□ -0.88
CEP290-204ENST00000547926 PLCG2P16885 1265 aa9.5□□□□□ -0.89
CEP290-204ENST00000547926 SGIP1Q9BQI5 828 aa9.5□□□□□ -0.89
CEP290-204ENST00000547926 POTEB3A0JP26 581 aa9.49□□□□□ -0.89
CEP290-204ENST00000547926 POTEBQ6S5H4 581 aa9.49□□□□□ -0.89
CEP290-204ENST00000547926 PLCD3Q8N3E9 789 aa9.48□□□□□ -0.89
CEP290-204ENST00000547926 PLEKHG5O94827 1062 aa9.46□□□□□ -0.89
CEP290-204ENST00000547926 KRTAP3-3Q9BYR6 98 aa9.43□□□□□ -0.9
CEP290-204ENST00000547926 KRTAP3-2Q9BYR7 98 aa9.43□□□□□ -0.9
CEP290-204ENST00000547926 OCEL1Q9H607 264 aa9.43□□□□□ -0.9
CEP290-204ENST00000547926 PCDHB8Q9UN66 801 aa9.43□□□□□ -0.9
CEP290-204ENST00000547926 PYGBP11216 843 aa9.42□□□□□ -0.9
CEP290-204ENST00000547926 TMEM121BQ9BXQ6 578 aaPredicted RBP9.42□□□□□ -0.9
CEP290-204ENST00000547926 PDCD7Q8N8D1 485 aaKnown RBP9.38□□□□□ -0.91
CEP290-204ENST00000547926 FAM212AQ96EL1 285 aa9.37□□□□□ -0.91
CEP290-204ENST00000547926 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.37□□□□□ -0.91
CEP290-204ENST00000547926 EMP3P54852 163 aa9.34□□□□□ -0.91
CEP290-204ENST00000547926 HS3ST6Q96QI5 342 aa9.34□□□□□ -0.91
CEP290-204ENST00000547926 FAM205CA6NFA0 338 aa9.34□□□□□ -0.91
CEP290-204ENST00000547926 SNPHO15079 494 aa9.31□□□□□ -0.92
CEP290-204ENST00000547926 DCAF8Q5TAQ9 597 aa9.31□□□□□ -0.92
CEP290-204ENST00000547926 ZBTB47Q9UFB7 747 aaPredicted RBP9.27□□□□□ -0.93
CEP290-204ENST00000547926 DPY19L2Q6NUT2 758 aa9.26□□□□□ -0.93
CEP290-204ENST00000547926 C3orf67Q6ZVT6 689 aa9.25□□□□□ -0.93
CEP290-204ENST00000547926 HOXB3P14651 431 aaPredicted RBP9.2□□□□□ -0.94
CEP290-204ENST00000547926 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.2□□□□□ -0.942e-7■■■■■ 29.3
CEP290-204ENST00000547926 MKRN3Q13064 507 aaKnown RBP9.17□□□□□ -0.94
CEP290-204ENST00000547926 FKBP8Q14318 412 aa9.16□□□□□ -0.94
CEP290-204ENST00000547926 L3MBTL3Q96JM7 780 aaPredicted RBP9.15□□□□□ -0.94
CEP290-204ENST00000547926 ILDR1Q86SU0 546 aaPredicted RBP9.14□□□□□ -0.95
CEP290-204ENST00000547926 PSEN1P49768 467 aa9.13□□□□□ -0.95
CEP290-204ENST00000547926 GOLGA2Q08379 1002 aa9.13□□□□□ -0.95
CEP290-204ENST00000547926 ZNF467Q7Z7K2 595 aaPredicted RBP9.08□□□□□ -0.96
CEP290-204ENST00000547926 HOXB1P14653 301 aaPredicted RBP9.08□□□□□ -0.96
CEP290-204ENST00000547926 RNF166Q96A37 237 aaPredicted RBP9.08□□□□□ -0.96
CEP290-204ENST00000547926 CABP2Q9NPB3 220 aa9.06□□□□□ -0.96
CEP290-204ENST00000547926 BOLA1Q9Y3E2 137 aa9.06□□□□□ -0.96
CEP290-204ENST00000547926 ERBB3P21860 1342 aa9.06□□□□□ -0.96
CEP290-204ENST00000547926 VARS2Q5ST30 1063 aaKnown RBP9.05□□□□□ -0.96
CEP290-204ENST00000547926 TMEM92Q6UXU6 159 aa9.03□□□□□ -0.96
CEP290-204ENST00000547926 ZNF710Q8N1W2 664 aa9.02□□□□□ -0.96
CEP290-204ENST00000547926 CHRM1P11229 460 aaPredicted RBP9.01□□□□□ -0.97
CEP290-204ENST00000547926 KLHL34Q8N239 644 aa9.01□□□□□ -0.97
CEP290-204ENST00000547926 MYT1LQ9UL68 1186 aa9.01□□□□□ -0.97
CEP290-204ENST00000547926 GSE1Q14687 1217 aa8.99□□□□□ -0.97
CEP290-204ENST00000547926 PDAP1Q13442 181 aaKnown RBP8.98□□□□□ -0.97
CEP290-204ENST00000547926 VASPP50552 380 aaPredicted RBP8.96□□□□□ -0.97
CEP290-204ENST00000547926 DOK7Q18PE1 504 aa8.95□□□□□ -0.98
CEP290-204ENST00000547926 GPR153Q6NV75 609 aa8.93□□□□□ -0.98
CEP290-204ENST00000547926 ZNF687Q8N1G0 1237 aa8.93□□□□□ -0.98
CEP290-204ENST00000547926 EFCAB3Q8N7B9 438 aa8.92□□□□□ -0.98
CEP290-204ENST00000547926 KHSRPQ92945 711 aaKnown RBP eCLIP8.92□□□□□ -0.982e-6■■■□□ 16.3
CEP290-204ENST00000547926 G3V3G9 751 aa8.92□□□□□ -0.98
CEP290-204ENST00000547926 ANKRD13DQ6ZTN6 518 aa8.89□□□□□ -0.99
CEP290-204ENST00000547926 FBXO3Q9UK99 471 aa8.89□□□□□ -0.99
CEP290-204ENST00000547926 MICALL2Q8IY33 904 aa8.88□□□□□ -0.99
CEP290-204ENST00000547926 ARSIQ5FYB1 569 aa8.87□□□□□ -0.99
CEP290-204ENST00000547926 CIZ1Q9ULV3 898 aaPredicted RBP8.87□□□□□ -0.99
CEP290-204ENST00000547926 IFNLR1Q8IU57 520 aaPredicted RBP8.86□□□□□ -0.99
CEP290-204ENST00000547926 MS4A4AQ96JQ5 239 aa8.86□□□□□ -0.99
CEP290-204ENST00000547926 RIMBP2O15034 1052 aa8.84□□□□□ -0.99
CEP290-204ENST00000547926 POTEEQ6S8J3 1075 aa8.83□□□□□ -1
CEP290-204ENST00000547926 ZSWIM6Q9HCJ5 1215 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 195.5 ms