RNA–Protein interactions for RNA: ENST00000547666.1

APAF1-206, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 5

Gene APAF1, Length 1,596 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-206ENST00000547666 CECR2Q9BXF3 1484 aa13.38□□□□□ -0.27
APAF1-206ENST00000547666 NUBP1P53384 320 aa13.37□□□□□ -0.27
APAF1-206ENST00000547666 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
APAF1-206ENST00000547666 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
APAF1-206ENST00000547666 CIZ1Q9ULV3 898 aaPredicted RBP13.36□□□□□ -0.27
APAF1-206ENST00000547666 SLC24A1O60721 1099 aa13.35□□□□□ -0.27
APAF1-206ENST00000547666 ECM2O94769 699 aaPredicted RBP13.32□□□□□ -0.28
APAF1-206ENST00000547666 GSE1Q14687 1217 aa13.32□□□□□ -0.28
APAF1-206ENST00000547666 PIP4P2Q8N4L2 257 aa13.32□□□□□ -0.28
APAF1-206ENST00000547666 FARP1Q9Y4F1 1045 aaPredicted RBP13.31□□□□□ -0.28
APAF1-206ENST00000547666 DCAF8Q5TAQ9 597 aa13.28□□□□□ -0.28
APAF1-206ENST00000547666 FAM212AQ96EL1 285 aa13.28□□□□□ -0.28
APAF1-206ENST00000547666 TRIM41Q8WV44 630 aa13.27□□□□□ -0.29
APAF1-206ENST00000547666 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
APAF1-206ENST00000547666 EIF4G1Q04637 1599 aaKnown RBP13.23□□□□□ -0.29
APAF1-206ENST00000547666 MROH2BQ7Z745 1585 aa13.23□□□□□ -0.29
APAF1-206ENST00000547666 RSF1Q96T23 1441 aaPredicted RBP13.18□□□□□ -0.3
APAF1-206ENST00000547666 SMARCA4P51532 1647 aa13.18□□□□□ -0.3
APAF1-206ENST00000547666 SP7Q8TDD2 431 aaPredicted RBP13.18□□□□□ -0.3
APAF1-206ENST00000547666 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
APAF1-206ENST00000547666 RGL2O15211 777 aa13.17□□□□□ -0.3
APAF1-206ENST00000547666 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
APAF1-206ENST00000547666 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
APAF1-206ENST00000547666 CHRM1P11229 460 aaPredicted RBP13.11□□□□□ -0.31
APAF1-206ENST00000547666 SUPT5HO00267 1087 aaKnown RBP13.11□□□□□ -0.31
APAF1-206ENST00000547666 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
APAF1-206ENST00000547666 WIZO95785 1651 aa13.08□□□□□ -0.32
APAF1-206ENST00000547666 PAK3O75914 559 aaPredicted RBP13.07□□□□□ -0.32
APAF1-206ENST00000547666 PYGBP11216 843 aa13.06□□□□□ -0.32
APAF1-206ENST00000547666 RNF25Q96BH1 459 aaPredicted RBP13.05□□□□□ -0.32
APAF1-206ENST00000547666 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
APAF1-206ENST00000547666 CCDC61Q9Y6R9 512 aa13.03□□□□□ -0.32
APAF1-206ENST00000547666 NCAPD3P42695 1498 aa13.02□□□□□ -0.32
APAF1-206ENST00000547666 RIOK3O14730 519 aaKnown RBP13.02□□□□□ -0.33
APAF1-206ENST00000547666 TAOK2Q9UL54 1235 aa13□□□□□ -0.33
APAF1-206ENST00000547666 SMARCA2P51531 1590 aa13□□□□□ -0.33
APAF1-206ENST00000547666 CD44P16070 742 aaKnown RBP12.98□□□□□ -0.33
APAF1-206ENST00000547666 ZRANB1Q9UGI0 708 aa12.95□□□□□ -0.34
APAF1-206ENST00000547666 VGFO15240 615 aaPredicted RBP12.94□□□□□ -0.34
APAF1-206ENST00000547666 CHGAP10645 457 aaKnown RBP12.94□□□□□ -0.34
APAF1-206ENST00000547666 BAZ1BQ9UIG0 1483 aaKnown RBP12.94□□□□□ -0.34
APAF1-206ENST00000547666 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
APAF1-206ENST00000547666 BBXQ8WY36 941 aaPredicted RBP12.93□□□□□ -0.34
APAF1-206ENST00000547666 ZNF467Q7Z7K2 595 aaPredicted RBP12.92□□□□□ -0.34
APAF1-206ENST00000547666 HMGXB3Q12766 1538 aa12.91□□□□□ -0.34
APAF1-206ENST00000547666 HS6ST3Q8IZP7 471 aa12.9□□□□□ -0.34
APAF1-206ENST00000547666 SGIP1Q9BQI5 828 aa12.9□□□□□ -0.35
APAF1-206ENST00000547666 TOP2AP11388 1531 aaKnown RBP12.89□□□□□ -0.35
APAF1-206ENST00000547666 KIF12Q96FN5 646 aa12.88□□□□□ -0.35
APAF1-206ENST00000547666 PLCB2Q00722 1185 aa12.87□□□□□ -0.35
APAF1-206ENST00000547666 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.87□□□□□ -0.35
APAF1-206ENST00000547666 HAX1O00165 279 aa12.86□□□□□ -0.35
APAF1-206ENST00000547666 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
APAF1-206ENST00000547666 PCDHB13Q9Y5F0 798 aa12.86□□□□□ -0.35
APAF1-206ENST00000547666 MAP3K13O43283 966 aa12.86□□□□□ -0.35
APAF1-206ENST00000547666 PCDHB8Q9UN66 801 aa12.85□□□□□ -0.35
APAF1-206ENST00000547666 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.84□□□□□ -0.35
APAF1-206ENST00000547666 STK25O00506 426 aa12.84□□□□□ -0.35
APAF1-206ENST00000547666 ZFP91Q96JP5 570 aaPredicted RBP12.84□□□□□ -0.35
APAF1-206ENST00000547666 PHF12Q96QT6 1004 aa12.83□□□□□ -0.36
APAF1-206ENST00000547666 CCDC88BA6NC98 1476 aa12.82□□□□□ -0.36
APAF1-206ENST00000547666 DNAJC5Q9H3Z4 198 aa12.81□□□□□ -0.36
APAF1-206ENST00000547666 PDAP1Q13442 181 aaKnown RBP12.81□□□□□ -0.36
APAF1-206ENST00000547666 IFNL1Q8IU54 200 aa12.81□□□□□ -0.36
APAF1-206ENST00000547666 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
APAF1-206ENST00000547666 STK24Q9Y6E0 443 aa12.78□□□□□ -0.36
APAF1-206ENST00000547666 PSEN1P49768 467 aa12.76□□□□□ -0.37
APAF1-206ENST00000547666 PAXIP1Q6ZW49 1069 aaPredicted RBP12.75□□□□□ -0.37
APAF1-206ENST00000547666 SPRYD3Q8NCJ5 442 aa12.73□□□□□ -0.37
APAF1-206ENST00000547666 CFAP44Q96MT7 982 aa12.73□□□□□ -0.37
APAF1-206ENST00000547666 EVX2Q03828 476 aa12.71□□□□□ -0.37
APAF1-206ENST00000547666 MS4A3Q96HJ5 214 aa12.7□□□□□ -0.38
APAF1-206ENST00000547666 NESP48681 1621 aa12.7□□□□□ -0.38
APAF1-206ENST00000547666 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
APAF1-206ENST00000547666 CLCN6P51797 869 aa12.69□□□□□ -0.38
APAF1-206ENST00000547666 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
APAF1-206ENST00000547666 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
APAF1-206ENST00000547666 CFTRP13569 1480 aa12.64□□□□□ -0.39
APAF1-206ENST00000547666 GTPBP6O43824 516 aaPredicted RBP12.61□□□□□ -0.39
APAF1-206ENST00000547666 RYDENQ9NUL5 291 aaKnown RBP12.61□□□□□ -0.39
APAF1-206ENST00000547666 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
APAF1-206ENST00000547666 GALR2O43603 387 aaPredicted RBP12.6□□□□□ -0.39
APAF1-206ENST00000547666 TMEM106CQ9BVX2 250 aa12.6□□□□□ -0.39
APAF1-206ENST00000547666 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
APAF1-206ENST00000547666 TIE1P35590 1138 aa12.59□□□□□ -0.39
APAF1-206ENST00000547666 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
APAF1-206ENST00000547666 EFCAB3Q8N7B9 438 aa12.56□□□□□ -0.4
APAF1-206ENST00000547666 SOX12O15370 315 aa12.53□□□□□ -0.4
APAF1-206ENST00000547666 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.4
APAF1-206ENST00000547666 GOLGA2Q08379 1002 aa12.52□□□□□ -0.4
APAF1-206ENST00000547666 MFRPQ9BY79 579 aa12.52□□□□□ -0.4
APAF1-206ENST00000547666 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.4
APAF1-206ENST00000547666 TSHZ2Q9NRE2 1034 aa12.51□□□□□ -0.41
APAF1-206ENST00000547666 FANCD2Q9BXW9 1451 aa12.5□□□□□ -0.41
APAF1-206ENST00000547666 GABBR2O75899 941 aa12.5□□□□□ -0.41
APAF1-206ENST00000547666 VSIG10Q8N0Z9 540 aa12.5□□□□□ -0.41
APAF1-206ENST00000547666 PDS5BQ9NTI5 1447 aa12.49□□□□□ -0.41
APAF1-206ENST00000547666 NLRP6P59044 892 aa12.48□□□□□ -0.41
APAF1-206ENST00000547666 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
APAF1-206ENST00000547666 KIF21AQ7Z4S6 1674 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms