RNA–Protein interactions for RNA: ENST00000547465.1

CASC18-201, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best)

Gene CASC18, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-201ENST00000547465 PLCD3Q8N3E9 789 aa7.43□□□□□ -1.22
CASC18-201ENST00000547465 CAPN15O75808 1086 aa7.41□□□□□ -1.22
CASC18-201ENST00000547465 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.41□□□□□ -1.22
CASC18-201ENST00000547465 P3H3Q8IVL6 736 aa7.4□□□□□ -1.22
CASC18-201ENST00000547465 GTPBP6O43824 516 aaPredicted RBP7.39□□□□□ -1.23
CASC18-201ENST00000547465 APLP2Q06481 763 aa7.39□□□□□ -1.23
CASC18-201ENST00000547465 SPINK5Q9NQ38 1064 aaPredicted RBP7.39□□□□□ -1.23
CASC18-201ENST00000547465 STAG3Q9UJ98 1225 aa7.39□□□□□ -1.23
CASC18-201ENST00000547465 ZMYND15Q9H091 742 aa7.38□□□□□ -1.23
CASC18-201ENST00000547465 RSPH6AQ9H0K4 717 aa7.38□□□□□ -1.23
CASC18-201ENST00000547465 NKX1-1Q15270 411 aaPredicted RBP7.37□□□□□ -1.23
CASC18-201ENST00000547465 TRIM41Q8WV44 630 aa7.37□□□□□ -1.23
CASC18-201ENST00000547465 TRHP20396 242 aaPredicted RBP7.35□□□□□ -1.23
CASC18-201ENST00000547465 CCDC9Q9Y3X0 531 aaKnown RBP7.35□□□□□ -1.23
CASC18-201ENST00000547465 ARID3AQ99856 593 aa7.34□□□□□ -1.23
CASC18-201ENST00000547465 CHRDL2Q6WN34 429 aa7.33□□□□□ -1.24
CASC18-201ENST00000547465 MIER1Q8N108 512 aa7.33□□□□□ -1.24
CASC18-201ENST00000547465 PLSCR2Q9NRY7 297 aa7.33□□□□□ -1.24
CASC18-201ENST00000547465 ZBTB7CA1YPR0 619 aa7.31□□□□□ -1.24
CASC18-201ENST00000547465 ZC3H15Q8WU90 426 aaKnown RBP7.3□□□□□ -1.24
CASC18-201ENST00000547465 SLC24A3Q9HC58 644 aa7.3□□□□□ -1.24
CASC18-201ENST00000547465 RNF25Q96BH1 459 aaPredicted RBP7.28□□□□□ -1.24
CASC18-201ENST00000547465 PELP1Q8IZL8 1130 aaKnown RBP7.27□□□□□ -1.25
CASC18-201ENST00000547465 KCNV2Q8TDN2 545 aa7.27□□□□□ -1.25
CASC18-201ENST00000547465 PDIA4P13667 645 aaKnown RBP7.26□□□□□ -1.25
CASC18-201ENST00000547465 WDR70Q9NW82 654 aa7.26□□□□□ -1.25
CASC18-201ENST00000547465 RYDENQ9NUL5 291 aaKnown RBP7.25□□□□□ -1.25
CASC18-201ENST00000547465 ZBTB47Q9UFB7 747 aaPredicted RBP7.25□□□□□ -1.25
CASC18-201ENST00000547465 STK25O00506 426 aa7.23□□□□□ -1.25
CASC18-201ENST00000547465 RIOK3O14730 519 aaKnown RBP7.23□□□□□ -1.25
CASC18-201ENST00000547465 PLEKHG5O94827 1062 aa7.23□□□□□ -1.25
CASC18-201ENST00000547465 ABCB7O75027 752 aa7.22□□□□□ -1.25
CASC18-201ENST00000547465 C1orf115Q9H7X2 142 aa7.22□□□□□ -1.25
CASC18-201ENST00000547465 POLA2Q14181 598 aa7.2□□□□□ -1.26
CASC18-201ENST00000547465 GSE1Q14687 1217 aa7.19□□□□□ -1.26
CASC18-201ENST00000547465 MYT1Q01538 1121 aa7.17□□□□□ -1.26
CASC18-201ENST00000547465 APBB1O00213 710 aa7.16□□□□□ -1.26
CASC18-201ENST00000547465 VGFO15240 615 aaPredicted RBP7.16□□□□□ -1.26
CASC18-201ENST00000547465 NECTIN2Q92692 538 aa7.16□□□□□ -1.26
CASC18-201ENST00000547465 TTBK1Q5TCY1 1321 aaPredicted RBP7.16□□□□□ -1.26
CASC18-201ENST00000547465 ARID3CA6NKF2 412 aa7.15□□□□□ -1.26
CASC18-201ENST00000547465 IL27Q8NEV9 243 aa7.15□□□□□ -1.26
CASC18-201ENST00000547465 ZMYND10O75800 440 aa7.14□□□□□ -1.27
CASC18-201ENST00000547465 ZNF692Q9BU19 519 aaPredicted RBP7.14□□□□□ -1.27
CASC18-201ENST00000547465 ZBTB12Q9Y330 459 aaPredicted RBP7.14□□□□□ -1.27
CASC18-201ENST00000547465 LOC105371045A0A1W2PR82 267 aa7.13□□□□□ -1.27
CASC18-201ENST00000547465 STK24Q9Y6E0 443 aa7.13□□□□□ -1.27
CASC18-201ENST00000547465 HAX1O00165 279 aa7.12□□□□□ -1.27
CASC18-201ENST00000547465 ARHGEF1Q92888 912 aaKnown RBP7.12□□□□□ -1.27
CASC18-201ENST00000547465 GPBP1L1Q9HC44 474 aaPredicted RBP7.12□□□□□ -1.27
CASC18-201ENST00000547465 TESPA1A2RU30 521 aaPredicted RBP7.11□□□□□ -1.27
CASC18-201ENST00000547465 CADPS2Q86UW7 1296 aa7.11□□□□□ -1.27
CASC18-201ENST00000547465 BCL11BQ9C0K0 894 aaPredicted RBP7.11□□□□□ -1.27
CASC18-201ENST00000547465 RBM42Q9BTD8 480 aaKnown RBP7.1□□□□□ -1.27
CASC18-201ENST00000547465 SEMA3EO15041 775 aa7.09□□□□□ -1.27
CASC18-201ENST00000547465 KCTD17Q8N5Z5 321 aa7.09□□□□□ -1.27
CASC18-201ENST00000547465 MKRN3Q13064 507 aaKnown RBP7.08□□□□□ -1.28
CASC18-201ENST00000547465 DCAF8Q5TAQ9 597 aa7.08□□□□□ -1.28
CASC18-201ENST00000547465 BARGINQ6ZT62 677 aa7.08□□□□□ -1.28
CASC18-201ENST00000547465 AK7Q96M32 723 aa7.08□□□□□ -1.28
CASC18-201ENST00000547465 SHROOM4Q9ULL8 1493 aa7.07□□□□□ -1.28
CASC18-201ENST00000547465 PABPN1Q86U42 306 aaKnown RBP eCLIP7.07□□□□□ -1.28
CASC18-201ENST00000547465 SGIP1Q9BQI5 828 aa7.07□□□□□ -1.28
CASC18-201ENST00000547465 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.06□□□□□ -1.28
CASC18-201ENST00000547465 RAD21O60216 631 aa7.06□□□□□ -1.28
CASC18-201ENST00000547465 ZFP91Q96JP5 570 aaPredicted RBP7.06□□□□□ -1.28
CASC18-201ENST00000547465 KDM4CQ9H3R0 1056 aa7.06□□□□□ -1.28
CASC18-201ENST00000547465 SMYD5Q6GMV2 418 aa7.05□□□□□ -1.28
CASC18-201ENST00000547465 FLIIQ13045 1269 aa7.04□□□□□ -1.28
CASC18-201ENST00000547465 CCDC82Q8N4S0 544 aa7.04□□□□□ -1.28
CASC18-201ENST00000547465 SSUH2Q9Y2M2 353 aa7.04□□□□□ -1.28
CASC18-201ENST00000547465 NUBP1P53384 320 aa7.03□□□□□ -1.28
CASC18-201ENST00000547465 E2F4Q16254 413 aa7.03□□□□□ -1.28
CASC18-201ENST00000547465 SPDYE2BA6NHP3 402 aa7.02□□□□□ -1.29
CASC18-201ENST00000547465 SPDYE6P0CI01 402 aa7.02□□□□□ -1.29
CASC18-201ENST00000547465 SPDYE2Q495Y8 402 aa7.02□□□□□ -1.29
CASC18-201ENST00000547465 IGSF3O75054 1194 aa7.01□□□□□ -1.29
CASC18-201ENST00000547465 LHX8Q68G74 356 aa7.01□□□□□ -1.29
CASC18-201ENST00000547465 KRI1Q8N9T8 703 aaKnown RBP7.01□□□□□ -1.29
CASC18-201ENST00000547465 TRAIPQ9BWF2 469 aa7.01□□□□□ -1.29
CASC18-201ENST00000547465 PIP4P2Q8N4L2 257 aa7□□□□□ -1.29
CASC18-201ENST00000547465 HMGB1P09429 215 aaKnown RBP6.99□□□□□ -1.29
CASC18-201ENST00000547465 CHRM1P11229 460 aaPredicted RBP6.99□□□□□ -1.29
CASC18-201ENST00000547465 EVX2Q03828 476 aa6.99□□□□□ -1.29
CASC18-201ENST00000547465 AEBP1Q8IUX7 1158 aa6.99□□□□□ -1.29
CASC18-201ENST00000547465 RGS22Q8NE09 1264 aa6.99□□□□□ -1.29
CASC18-201ENST00000547465 TRAK2O60296 914 aa6.97□□□□□ -1.29
CASC18-201ENST00000547465 PDE4DQ08499 809 aa6.97□□□□□ -1.29
CASC18-201ENST00000547465 TMCO4Q5TGY1 634 aa6.97□□□□□ -1.29
CASC18-201ENST00000547465 FAM212AQ96EL1 285 aa6.97□□□□□ -1.29
CASC18-201ENST00000547465 MTMR7Q9Y216 660 aa6.97□□□□□ -1.29
CASC18-201ENST00000547465 ZNF316A6NFI3 1004 aaPredicted RBP6.96□□□□□ -1.3
CASC18-201ENST00000547465 A6NJR5 290 aa6.96□□□□□ -1.3
CASC18-201ENST00000547465 TRIM66O15016 1216 aa6.95□□□□□ -1.3
CASC18-201ENST00000547465 EIF5BO60841 1220 aaKnown RBP6.94□□□□□ -1.3
CASC18-201ENST00000547465 RBM25P49756 843 aaKnown RBP6.94□□□□□ -1.3
CASC18-201ENST00000547465 FAM117AQ9C073 453 aa6.94□□□□□ -1.3
CASC18-201ENST00000547465 CDK11BP21127 795 aaKnown RBP6.93□□□□□ -1.3
CASC18-201ENST00000547465 GPIHBP1Q8IV16 184 aa6.93□□□□□ -1.3
CASC18-201ENST00000547465 OSCARQ8IYS5 282 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms